Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30627
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 30  PQPPPLVARLPHHQLRRHYFTRSSYCAARSSSHGLHVRQGHI 155
           P  PPLV    HHQ+     T+  +   +   H    +Q H+
Sbjct: 158 PDSPPLVESQMHHQMH----TQHPHMQPQQGQHQSQAQQQHL 195


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 295 DGALEKPSALTHSLYSRE-RP 236
           +G LEK  ALT + YSR+ RP
Sbjct: 393 EGDLEKCKALTRAAYSRDVRP 413


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 295 DGALEKPSALTHSLYSRE-RP 236
           +G LEK  ALT + YSR+ RP
Sbjct: 393 EGDLEKCKALTRAAYSRDVRP 413


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 295 DGALEKPSALTHSLYSRE-RP 236
           +G LEK  ALT + YSR+ RP
Sbjct: 393 EGDLEKCKALTRAAYSRDVRP 413


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 12  QALQETPQPPPLVARLPHHQLRRHYFTRSSYCAARSSSHGLHV 140
           QA Q   Q    +A +   Q R  +  +  Y   + S HGLH+
Sbjct: 774 QAQQVQQQMQAAMAAVQQSQQRHQHAAQMIY-GHQQSHHGLHI 815


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 19  FKKLHNRRLLW 51
           F++ HN+ LLW
Sbjct: 797 FEQFHNKELLW 807


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 19  FKKLHNRRLLW 51
           F++ HN+ LLW
Sbjct: 835 FEQFHNKELLW 845


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,060
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)