Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30627
(702 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative ... 141 5e-34
At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+) A... 130 1e-30
At5g22470.1 68418.m02621 poly (ADP-ribose) polymerase family pro... 60 1e-09
At2g35510.1 68415.m04349 WWE domain-containing protein contains ... 35 0.060
At1g32230.2 68414.m03965 WWE domain-containing protein / ceo pro... 34 0.079
At1g32230.1 68414.m03964 WWE domain-containing protein / ceo pro... 34 0.079
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 29 3.0
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 29 3.0
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 29 3.0
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 29 3.0
At3g53290.1 68416.m05876 cytochrome P450, putative Similar to Cy... 29 3.0
At2g24710.1 68415.m02952 glutamate receptor family protein (GLR2... 29 3.9
At4g17130.1 68417.m02579 hypothetical protein 28 5.2
At4g17505.1 68417.m02619 expressed protein contains Pfam profil... 27 9.1
At4g11450.1 68417.m01843 expressed protein 27 9.1
At1g50560.1 68414.m05673 cytochrome P450, putative similar to CY... 27 9.1
>At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative /
NAD(+) ADP-ribosyltransferase, putative /
poly[ADP-ribose] synthetase, putative similar to
poly(ADP)-ribose polymerase [Zea mays] GI:3928871 ;
contains Pfam profiles PF00644: Poly(ADP-ribose)
polymerase catalytic domain, PF00645: Poly(ADP-ribose)
polymerase and DNA-Ligase Zn-finger region, PF02877:
Poly(ADP-ribose) polymerase, regulatory domain, PF00533:
BRCA1 C Terminus (BRCT) domain
Length = 983
Score = 141 bits (341), Expect = 5e-34
Identities = 66/96 (68%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = +1
Query: 7 RYKPFK-KLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 183
+Y P + KL N+ LLWHGSR TNF GI++QGLRIAPPEAP TGYMFGKGIYFAD+VSKSA
Sbjct: 817 KYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSA 876
Query: 184 NYCCTTRNNPVGLMLLCEVALGNIRSVSMLKVSLKP 291
YC T + NPVGLMLL EVALG I ++ K KP
Sbjct: 877 QYCYTCKKNPVGLMLLSEVALGEIHELTKAKYMDKP 912
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 EYKECVNAEGFSKAPSGTHSVWGVGRTEPDPKMNKELPDGLIVPLGTPVD-RAENSTLLY 425
E E A+ K P G HS G+G+ P + + VP G PV + + S L+Y
Sbjct: 899 EIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVKASELMY 958
Query: 426 NEFIVYDVAQVKVKYLIEMRFDYR 497
NE+IVYD AQVK+++L+++RF ++
Sbjct: 959 NEYIVYDTAQVKLQFLLKVRFKHK 982
>At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+)
ADP-ribosyltransferase / poly[ADP-ribose] synthetase
(APP) identical to SP|Q11207 Poly [ADP-ribose]
polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP-
ribosyltransferase) (Poly[ADP-ribose] synthetase)
{Arabidopsis thaliana}
Length = 637
Score = 130 bits (313), Expect = 1e-30
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = +1
Query: 7 RYKPFKKLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSAN 186
R++ F NR LLWHGSR TN+AGI+SQGLRIAPPEAPVTGYMFGKG+YFADM SKSAN
Sbjct: 471 RFQQFSSSKNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSAN 530
Query: 187 YCCTTRNNPVGLMLLCEVALGNIRSV 264
YC G++LLCEVALG++ +
Sbjct: 531 YCYANTGANDGVLLLCEVALGDMNEL 556
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/70 (48%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +3
Query: 291 PSGTHSVWGVGRTEPDPKMNKELPDGLIVPLGTPVDRA-ENSTLLYNEFIVYDVAQVKVK 467
P G S GVG+T P+P + L DG++VPLG PV+R+ LLYNE+IVY+V Q+K++
Sbjct: 567 PPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNVEQIKMR 626
Query: 468 YLIEMRFDYR 497
Y+I+++F+Y+
Sbjct: 627 YVIQVKFNYK 636
>At5g22470.1 68418.m02621 poly (ADP-ribose) polymerase family
protein similar to poly(ADP)-ribose polymerase [Zea
mays] GI:3928871; contains Pfam profiles PF00644:
Poly(ADP-ribose) polymerase catalytic domain, PF00533:
BRCA1 C Terminus (BRCT) domain, PF05406: WGR domain
Length = 815
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +1
Query: 22 KKLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTT 201
KKL N+ LLW GSR++N I +G A PV GYMFG+ I +D +++A Y T
Sbjct: 644 KKLPNKVLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTA 703
Query: 202 RNNPVGLMLLCEVALG 249
+ P G ++L +LG
Sbjct: 704 VDRPEGFLVLAVASLG 719
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 309 VWGVGRTEPDPKMNKELPDGLIVPLGTPV-DRAENSTLLYNEFIVYDVAQVKVKYLIEMR 485
V G+GR + + + D + VP G V ++S L YNE+ VYD Q +++L+E++
Sbjct: 742 VKGLGRKKTEESEHFMWRDDIKVPCGRLVPSEHKDSPLEYNEYAVYDPKQTSIRFLVEVK 801
Query: 486 FD 491
++
Sbjct: 802 YE 803
>At2g35510.1 68415.m04349 WWE domain-containing protein contains
Pfam domain, PF02825: WWE domain
Length = 568
Score = 34.7 bits (76), Expect = 0.060
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 34 NRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTTRNNP 213
N R W ++ + ++ GL + A + M+G G++ A+ SA YC +N
Sbjct: 323 NIRYAWVPAKKEVLSAVMMHGLGVGG--AFIKKSMYGVGVHAANCPYFSARYC-DIDDNG 379
Query: 214 VGLMLLCEVALGNI 255
V M+LC V +GN+
Sbjct: 380 VRHMVLCRVIMGNM 393
>At1g32230.2 68414.m03965 WWE domain-containing protein / ceo
protein, putative (CEO) contains Pfam domain, PF02825:
WWE domain; identical to cDNA for ceo protein (ceo gene)
GI:11044956
Length = 588
Score = 34.3 bits (75), Expect = 0.079
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 NRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYF--ADMVSKSANYCCTTRN 207
N R W ++ + ++ QGL + A + ++G GI+ AD SA YC N
Sbjct: 327 NVRYAWLPAKREVLSAVMMQGLGVGG--AFIRKSIYGVGIHLTAADCPYFSARYCDVDEN 384
Query: 208 NPVGLMLLCEVALGNI 255
V M+LC V +GN+
Sbjct: 385 G-VRYMVLCRVIMGNM 399
>At1g32230.1 68414.m03964 WWE domain-containing protein / ceo
protein, putative (CEO) contains Pfam domain, PF02825:
WWE domain; identical to cDNA for ceo protein (ceo gene)
GI:11044956
Length = 589
Score = 34.3 bits (75), Expect = 0.079
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 NRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYF--ADMVSKSANYCCTTRN 207
N R W ++ + ++ QGL + A + ++G GI+ AD SA YC N
Sbjct: 327 NVRYAWLPAKREVLSAVMMQGLGVGG--AFIRKSIYGVGIHLTAADCPYFSARYCDVDEN 384
Query: 208 NPVGLMLLCEVALGNI 255
V M+LC V +GN+
Sbjct: 385 G-VRYMVLCRVIMGNM 399
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 409 FSALSTG--VPSGTMSPSGNSLFIFGSGSVRPTPHTECV--PDGALEKPSALTHSLYSR 245
+S ++ G PS + SPS N+ I SG + + + PD A++ L LYS+
Sbjct: 832 YSGITDGGDAPSSSTSPSTNNCQISSSGFLNRSQSGPAILIPDAAIDMSGNLVQDLYSK 890
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 409 FSALSTG--VPSGTMSPSGNSLFIFGSGSVRPTPHTECV--PDGALEKPSALTHSLYSR 245
+S ++ G PS + SPS N+ I SG + + + PD A++ L LYS+
Sbjct: 831 YSGITDGGDAPSSSTSPSTNNCQISSSGFLNRSQSGPAILIPDAAIDMSGNLVQDLYSK 889
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 409 FSALSTG--VPSGTMSPSGNSLFIFGSGSVRPTPHTECV--PDGALEKPSALTHSLYSR 245
+S ++ G PS + SPS N+ I SG + + + PD A++ L LYS+
Sbjct: 832 YSGITDGGDAPSSSTSPSTNNCQISSSGFLNRSQSGPAILIPDAAIDMSGNLVQDLYSK 890
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 418 SVLFSALSTGVPSGTMSPSGNSLFIFGSGSV 326
SVLFSAL GV G SG SL + +GS+
Sbjct: 5 SVLFSALGVGVGLGIGLASGQSLGKWANGSI 35
>At3g53290.1 68416.m05876 cytochrome P450, putative Similar to
Cytochrome P450 71B31 (SP:Q9SCN2)[Arabidopsis thaliana];
conatins Pfam profile: PF00067 cytochrome P450
Length = 407
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 604 HLQTEQHEIFSNITSSITLLLNRMT 530
HL+TEQH+ SN+ S++ ++N+ T
Sbjct: 185 HLKTEQHQDHSNLISAMLNMINKPT 209
>At2g24710.1 68415.m02952 glutamate receptor family protein (GLR2.3)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 214 VGLMLLCEVALGNIRSVSMLK--VSLKPRPARIPCGASVELSRTRK 345
VG++L+C +ALGN + K VS + PC +S ++ RK
Sbjct: 836 VGVLLVCVMALGNFTYCFLAKDQVSYLDKVEMSPCSSSQQMPVKRK 881
>At4g17130.1 68417.m02579 hypothetical protein
Length = 747
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 409 FSALSTGVPSGTMSPSGNSLFIFGSGSVRPTPHTECVPDGALEKPSALTHSL 254
+ ALS V SG+ PS S F + SV P +CV + + +A+ SL
Sbjct: 625 YVALSCVVSSGSTPPSLASTFCILASSVSPCSLRDCVAISSTDMYAAMNLSL 676
>At4g17505.1 68417.m02619 expressed protein contains Pfam profile
PF03080: Arabidopsis proteins of unknown function;
expression supported by MPSS
Length = 322
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 55 GSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTTRNNPV 216
G+ T + G+ G + + P G K YF DM AN+ +NNP+
Sbjct: 237 GADTIRYGGLTVGGAPMGNGKFPDKGNDLSKSSYFKDMKYVDANF----KNNPI 286
>At4g11450.1 68417.m01843 expressed protein
Length = 694
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 414 TLLYNEFIVYDVAQVK 461
TL+ NEF++YD+AQ +
Sbjct: 367 TLMVNEFVLYDIAQAR 382
>At1g50560.1 68414.m05673 cytochrome P450, putative similar to
CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]
Length = 519
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 47 CGTAPAPPTSPALFHKVFVLRRPKLQSRATCSAR 148
CG P+PP+ P + H F+L P +S S++
Sbjct: 41 CGLPPSPPSLPIIGHLHFLLSVPCYKSFQKLSSK 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,646
Number of Sequences: 28952
Number of extensions: 312567
Number of successful extensions: 943
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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