Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30626
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 137 3e-31
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 135 9e-31
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 129 7e-29
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 113 4e-24
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 113 4e-24
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 106 6e-22
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 106 6e-22
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 93 4e-18
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 93 8e-18
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 92 1e-17
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 92 1e-17
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 88 2e-16
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 87 4e-16
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 86 7e-16
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 86 9e-16
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 83 8e-15
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 78 2e-13
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 75 2e-12
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 69 1e-10
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 68 3e-10
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 66 6e-10
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 65 1e-09
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 65 1e-09
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 62 1e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 62 2e-08
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 60 7e-08
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 58 3e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 58 3e-07
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 55 2e-06
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 54 3e-06
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 3e-06
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 8e-06
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 52 1e-05
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 5e-05
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 3e-04
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 47 4e-04
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 46 7e-04
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 44 0.005
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 43 0.006
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 41 0.025
UniRef50_A0NAP9 Cluster: ENSANGP00000018250; n=2; Anopheles gamb... 33 5.1
UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;... 33 6.7
UniRef50_Q98FH4 Cluster: Mll3775 protein; n=20; Proteobacteria|R... 33 8.9
UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella ... 33 8.9
UniRef50_A2QZW5 Cluster: Similarity to AP1 protein from patent U... 33 8.9
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 8.9
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 137 bits (331), Expect = 3e-31
Identities = 65/85 (76%), Positives = 74/85 (87%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDK
Sbjct: 107 VPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLLNMLNISPFS+GLV++Q
Sbjct: 167 VGASEATLLNMLNISPFSFGLVIQQ 191
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
V+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 192 VFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLAL 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKF 506
K F+ DPS F
Sbjct: 252 SVETDYTFPLAEKVKAFLADPSAF 275
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 135 bits (327), Expect = 9e-31
Identities = 66/88 (75%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDK
Sbjct: 107 VPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDK 166
Query: 181 VGASEATL---LNMLNISPFSYGLVVKQ 255
VGASEATL LNMLNISPFSYGL+++Q
Sbjct: 167 VGASEATLLNMLNMLNISPFSYGLIIQQ 194
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYD+G++++PE+LDI + L +F GV N+A++ L IGYPT+AS PH+I NG+K +L
Sbjct: 195 VYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAV 254
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
K ++ DP+ FA
Sbjct: 255 TVETDYTFPLAEKVKAYLADPTAFA 279
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 129 bits (311), Expect = 7e-29
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+K
Sbjct: 107 VGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLL ML I PF+YGL + Q
Sbjct: 167 VGASEATLLQMLKIFPFTYGLKIVQ 191
Score = 100 bits (239), Expect = 4e-20
Identities = 48/85 (56%), Positives = 57/85 (67%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYDSG++FAP ILDI +DL +F +G+ANVAA+SL IGYPT+AS PHSI NGFKNLL
Sbjct: 192 VYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAV 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
K F+ DPS FA
Sbjct: 252 AVATDITFKEAEQAKAFVADPSAFA 276
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 113 bits (272), Expect = 4e-24
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDK
Sbjct: 109 VGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDK 168
Query: 181 VGASEATLLNMLNISPFSYGLVVK 252
VG+SEA LL L I PFSYGLVV+
Sbjct: 169 VGSSEAALLAKLGIRPFSYGLVVQ 192
Score = 86.2 bits (204), Expect = 7e-16
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLX 431
+VYD+G++F+PE+LD+ + L KF +G++ V +L+LA+ YPT+A+APH N +KN L
Sbjct: 193 SVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALA 252
Query: 432 XXXXXXXXXXXXXXXKEFIKDPSKF 506
KEF+KDPSKF
Sbjct: 253 IAVATDYTFPQAEKVKEFLKDPSKF 277
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 113 bits (272), Expect = 4e-24
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDK
Sbjct: 110 VGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169
Query: 181 VGASEATLLNMLNISPFSYGLVVK 252
VG+SEA LL L I PFSYGLVV+
Sbjct: 170 VGSSEAALLAKLGIRPFSYGLVVE 193
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/86 (47%), Positives = 57/86 (66%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLX 431
+VYD+G++F PE+L++ +DL KF AGV+ + ALSLAI YPT+A+APH N +KN+L
Sbjct: 194 SVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLA 253
Query: 432 XXXXXXXXXXXXXXXKEFIKDPSKFA 509
KEF+KDP+KFA
Sbjct: 254 VALATEYSFPQAENVKEFLKDPTKFA 279
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 106 bits (254), Expect = 6e-22
Identities = 51/84 (60%), Positives = 65/84 (77%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
VQAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+
Sbjct: 114 VQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDR 173
Query: 181 VGASEATLLNMLNISPFSYGLVVK 252
V S ATLL L+ISPF Y + V+
Sbjct: 174 VDNSTATLLQKLDISPFYYQVEVQ 197
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
+V+D G +F E L I + + G++NVAALSL G PT A+ PH I + FK LL
Sbjct: 198 SVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 106 bits (254), Expect = 6e-22
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G K
Sbjct: 106 VGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQK 165
Query: 181 VGASEATLLNMLNISPFSYGLVVK 252
VGASEATLL LNI PF+YGL K
Sbjct: 166 VGASEATLLQKLNIKPFTYGLEPK 189
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
+YD+G ++P I + EDL KF+ G+ N+AA+SL IGYPT+AS PHS+ N FKNLL
Sbjct: 191 IYDAGACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLL 245
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/81 (51%), Positives = 60/81 (74%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 186
+PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG
Sbjct: 116 SPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVG 175
Query: 187 ASEATLLNMLNISPFSYGLVV 249
S+A LL L I+PF YG V+
Sbjct: 176 VSQAVLLQKLKINPFKYGAVI 196
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
VYD+G ++ + LD+ D+ KFQ GV A+SLA PT A+ PH + N F+ LL
Sbjct: 199 VYDNGIVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALL 256
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 92.7 bits (220), Expect = 8e-18
Identities = 45/83 (54%), Positives = 53/83 (63%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK G K
Sbjct: 125 VETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQK 184
Query: 181 VGASEATLLNMLNISPFSYGLVV 249
VG S+A LL L PF YG+ V
Sbjct: 185 VGQSQAVLLQKLGKKPFLYGMEV 207
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 425
A YD+G+I + + + D+ AKFQ V NV+A+SL G+ ASAP+ +AN FK+L
Sbjct: 209 ACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDL 266
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = +1
Query: 4 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
+APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KV
Sbjct: 126 EAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKV 185
Query: 184 GASEATLLNMLNISPFSYGLVV 249
G++EA LL LNI+PFSY L V
Sbjct: 186 GSNEAALLQKLNINPFSYKLSV 207
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
V+D+G ++ P +LDI E + ++ ++NVA++SL G PT ASAPHSI FKNLL
Sbjct: 210 VFDNGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLL 267
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = +3
Query: 267 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
G+IF+P+ILDIKPEDLRAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NLL
Sbjct: 770 GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLL 823
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = +1
Query: 100 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL--NMLNISP 228
ALSIP KISKGTIEIINDV ILK GDK+ ++ ++L+I P
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKIEQVYGSIFSPDILDIKP 782
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K
Sbjct: 125 VPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKK 184
Query: 181 VGASEATLLNMLNISPFSYGL 243
+G SE +LL +NI PFSYG+
Sbjct: 185 IGNSEVSLLEKMNIQPFSYGM 205
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = +3
Query: 246 C*AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 425
C + YD+G I E+L I P + F +AA+SLA GY T S PH I N FK+L
Sbjct: 207 CFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDL 266
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V A A+ G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ K
Sbjct: 117 VPAEAKAGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKK 176
Query: 181 VGASEATLLNMLNISPFSYGLVVK 252
VG SEA LL L + PFS+GL VK
Sbjct: 177 VGNSEAVLLKKLGVKPFSFGLKVK 200
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYD+G++++ E+L + + L KF GV N+AA+SL +G PT ASAPHSI +GFKNL+
Sbjct: 202 VYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSI 261
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
+KDPSK A
Sbjct: 262 AHVVDYTFSQAEGLLAVLKDPSKLA 286
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 4 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
+A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKV
Sbjct: 130 EACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKV 189
Query: 184 GASEATLLNMLNISPFSYGLVVKQ 255
G S+A LL MLNI PF Y + + Q
Sbjct: 190 GPSQANLLGMLNIKPFCYKMTMHQ 213
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 428
+Y+ G I+ ++DI ED+ + ++ VAA SL G T AS P+++ N FK++L
Sbjct: 214 IYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDIL 271
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 85.8 bits (203), Expect = 9e-16
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +1
Query: 10 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 189
PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV A
Sbjct: 111 PARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTA 170
Query: 190 SEATLLNMLNISPFSYGLVVK 252
S ATLL N++P SYG+ V+
Sbjct: 171 SSATLLRKFNMNP-SYGVDVR 190
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYD G I+ ++LDI ED+ KF GV+NVAALS A G T AS PH FKN++
Sbjct: 192 VYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVAL 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
K+++++P FA
Sbjct: 252 IIDSDYTFPLMKILKKWVENPEAFA 276
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 82.6 bits (195), Expect = 8e-15
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = -3
Query: 255 LLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*NLGRDRKSLEERGLLW 76
L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T NLG + +SLEER L W
Sbjct: 136 LNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTW 195
Query: 75 TEAGVVGGNDD*QWGNGTRTSWS 7
GV G N D WGN T + WS
Sbjct: 196 FHTGVDGENPDIFWGNSTSSGWS 218
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -1
Query: 497 WVLNELLDGGSFFKLNLCDSSDGQKVLETIGNGMRG*SNSWVTNSQRKSSYISNSSLELG 318
WVLN +L +F+ + SD Q+VL + + WVT+SQ +S +S E+
Sbjct: 55 WVLNSVLQFFNFWVDVVSSDSDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVR 114
Query: 317 TEIFWFDVQN 288
+ D+Q+
Sbjct: 115 DQFIVSDIQD 124
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +1
Query: 4 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
+A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++K GD V
Sbjct: 109 KAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIV 168
Query: 184 GASEATLLNMLNISPFSYGL 243
S ATLL L I PF Y +
Sbjct: 169 TPSHATLLQRLEIDPFFYAM 188
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
+YD G I+ +L+I + AK+ AG+ +L+L +P + + PH + K+ +
Sbjct: 193 LYDDGEIYDAAVLEIDDSVMEAKWNAGLEAFVSLALGANFPCLPAIPHIFMDTAKSFIGA 252
Query: 435 XXXXXXXXXXXXXX-KEFIKDPSKFA 509
KE + DPSKFA
Sbjct: 253 GVEADVTEIPLVKRVKEILADPSKFA 278
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 192
A+ GAIAP V++ T + P AL+I KI KGTIEI + ++ G KVGAS
Sbjct: 113 AKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGAS 172
Query: 193 EATLLNMLNISPFSYGLVVK 252
EA +LN+L I PF Y L ++
Sbjct: 173 EANILNILGIMPFKYTLKIE 192
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLX 431
A+YD G ++ P IL I E L KF+ G+ NV L+LA+GYP ASAPH + + FK++
Sbjct: 193 ALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDIAA 252
Query: 432 XXXXXXXXXXXXXXXKEFIKDPSKFA 509
++ + DP A
Sbjct: 253 IAIAIEHNMKQIEDLQKLLSDPEALA 278
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +1
Query: 22 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEAT 201
G IA +++I L P +T FFQAL IPT+ISK +IEII D+ ++ + S+
Sbjct: 109 GEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEV 168
Query: 202 LLNMLNISPFSYGLVVKQYMILELFLHLKFWTSN 303
LL L+I P YG+ +K+ + ++LK N
Sbjct: 169 LLKKLDIKPHKYGVKIKKIFSSKGEINLKILQMN 202
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
APA+PGA+ P VV+PA T L P QAL IP +I KG + I D +LK G+ +
Sbjct: 110 APAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVI 169
Query: 184 GASEATLLNMLNISPFSYGLVV 249
A +LN L I P GL V
Sbjct: 170 TPELANILNALGIQPLEVGLDV 191
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKN 422
AVY+ G ++ P++L I ++ Q + L++ I YPT + I F N
Sbjct: 193 AVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLN 249
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 192
A+ G +A V + T + P+ FQ+L+IPTKI KG IEII + +L+ G K+ +
Sbjct: 110 AKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEA 169
Query: 193 EATLLNMLNISPF 231
EATLL LNI PF
Sbjct: 170 EATLLQKLNILPF 182
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
APA+PG +A +V+PA +TGL P S F L I T + GTI I D + KPGD +
Sbjct: 118 APAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVI 177
Query: 184 GASEATLLNMLNISPFSYGLVVKQYMILEL 273
A+LL L I+P + +K I L
Sbjct: 178 SPELASLLQKLGITPMELKMKIKGAYIKSL 207
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGD 177
V+ A+PG + +++PA NTG+ P S F L IPT+I G I + D + KPGD
Sbjct: 118 VRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGD 177
Query: 178 KVGASEATLLNMLNISPFSYGLVVKQYMI 264
V A LL ++N+ P L VK ++
Sbjct: 178 TVTPELADLLRLINVKPVYESLKVKAVLL 206
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGD 177
+ AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D + KPGD
Sbjct: 112 IMREARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGD 171
Query: 178 KVGASEATLLNMLNISPFSYGLVVK 252
+ A LL+ L + P L +K
Sbjct: 172 VISPELAELLSKLGLKPIESKLQIK 196
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 186
AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI I+ D +K G+ +G
Sbjct: 97 ARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPIG 155
Query: 187 ASEATLLNMLNISP 228
A LL L+I P
Sbjct: 156 DKLAPLLGKLDIKP 169
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 QAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDK 180
+APA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D I+ G++
Sbjct: 104 EAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEE 163
Query: 181 VGASEATLLNMLNISPFSYGL 243
+ + A +L L I P G+
Sbjct: 164 IPKAVADILTKLEIHPMEVGI 184
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 186
AR G IA + VV+PA NTG+ GP T F +A IPTKI +GTI I D + G+ +
Sbjct: 111 ARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAIN 169
Query: 187 ASEATLLNMLNISPFSYGLVV 249
A +L L+I P G+ +
Sbjct: 170 EKLAAILGKLDIKPVEAGITL 190
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 16 RPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 192
+PG IA +VIP NTGL P S F L IPT+I +I I D + KPGD +
Sbjct: 115 KPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEE 174
Query: 193 EATLLNMLNIS 225
A+LL L+I+
Sbjct: 175 LASLLQRLDIA 185
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 174
V P + G IAP +VIP T + GP +T +AL + TK++ G IEI+ D ++K G
Sbjct: 102 VNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIVEDAVVVKEG 160
Query: 175 DKVGASEATLLNMLNISP 228
+ V A +L L I P
Sbjct: 161 EIVSPKVANVLQTLGIKP 178
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +3
Query: 336 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 506
V NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 57
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
AP + GAIAP + + + +TG+ P S +A+ IP I KG I I D + K GD +
Sbjct: 115 APIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVI 174
Query: 184 GASEATLLNMLNISPFSYGLVV 249
A +L+ L I P + GL V
Sbjct: 175 SPKLAVVLSALGIKPVTVGLNV 196
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 52.8 bits (121), Expect = 8e-06
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 186
A PG A VVIPA +TG+ GP S F L + TK+ G + ++ D + KPGD +
Sbjct: 115 AMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIP 173
Query: 187 ASEATLLNMLNISPFSYGLVVK 252
A +L L I P L +K
Sbjct: 174 AEALPILQKLGIMPVYVKLKIK 195
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
APA+PG IAP +V+P T P S Q +P +I G + I D ++K G+++
Sbjct: 121 APAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEI 180
Query: 184 GASEATLLNMLNISPFSYGL 243
A +L L I P G+
Sbjct: 181 DEKTAEILKKLEIEPMEVGV 200
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGD 177
V+ A+PG AP +V+PA T P S F L IPT++ +G I I D + K G
Sbjct: 115 VRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQ 174
Query: 178 KVGASEATLLNMLNISP 228
++ A +L ++ I P
Sbjct: 175 EITPEMAEVLRVVGIEP 191
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 7 APARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 183
AP G +AP +V+P +TG+ P Q + +I +G+I++++D + + G+ V
Sbjct: 112 APINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETV 171
Query: 184 GASEATLLNMLNISPFSYGL 243
+ +L+ L I P GL
Sbjct: 172 SDDVSNVLSELGIEPKEVGL 191
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANG 413
V+ G +F PE L+I ++ RA Q+ A+ LS+ YPT +AP IA G
Sbjct: 196 VFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = -1
Query: 137 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGA 6
+VP ILVG +AWKKEV G PVL A +GA AP AGA
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGA 44
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 189
A+ G IAP +VIP T P FQ + IP I G + I + ++K G+K+ A
Sbjct: 117 AKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISA 176
Query: 190 SEATLLNMLNISPFSYGL 243
A L L I P GL
Sbjct: 177 KLAEALTRLEIMPIDVGL 194
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 PARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 186
P + GA+AP+ +V+ + T P Q+ IP I G + I V + K GD +
Sbjct: 112 PIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVIT 171
Query: 187 ASEATLLNMLNISPFSYGLVVK 252
A +L ++ I P GL ++
Sbjct: 172 PKVAEVLKLMEIYPKLVGLELR 193
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 ARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 189
A+PG AP +VIP T P Q + IP I G ++I ++K G+ +
Sbjct: 110 AKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINK 169
Query: 190 SEATLLNMLNISPFSYGLVVK 252
A L L + P GL+++
Sbjct: 170 KVAEALVKLGVKPMDVGLILQ 190
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 41.1 bits (92), Expect = 0.025
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGD 177
+ AP + GA+AP+ +VI T L P Q L IP+ I G + + ++ G+
Sbjct: 104 IPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGE 163
Query: 178 KVGASEATLLNMLNISPFSYGL 243
V A +L L I P + GL
Sbjct: 164 IVSPELADMLAKLEIYPITEGL 185
>UniRef50_A0NAP9 Cluster: ENSANGP00000018250; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018250 - Anopheles gambiae
str. PEST
Length = 171
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 323 LGTEIFWFDVQNFRCKNSSRIIYCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLM 144
LG + W + + R +S + L T Y N E++ ++R +AP P F S +
Sbjct: 98 LGCDPCWGLIPHGRFADSFECVSALPTPKYANDEVYQIMRHCWKQAPQERPSFVELCSRL 157
Query: 143 ISIVPFEIL 117
++P +L
Sbjct: 158 NCLIPRSML 166
>UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;
Enterobacteriaceae|Rep: Putative fimbrial adhesin
protein - Escherichia coli
Length = 174
Score = 33.1 bits (72), Expect = 6.7
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 28 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 207
+ PLS A T LGP+ T L KIS+G E++ D + G V +
Sbjct: 10 LLPLSFSSFAATTDLGPKGT-----LKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIG 64
Query: 208 NMLNISPFSYGL-----VVKQYMILE 270
+N +PFS GL VV+ Y+ ++
Sbjct: 65 TEINPTPFSIGLKNCSEVVRAYVTMD 90
>UniRef50_Q98FH4 Cluster: Mll3775 protein; n=20; Proteobacteria|Rep:
Mll3775 protein - Rhizobium loti (Mesorhizobium loti)
Length = 218
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 210 HVEHLSILIWSCC*AVYDSGTIFAPEILDIKPEDLRAKF 326
H L+ W A+Y++GT F P I+D+ E RA F
Sbjct: 6 HFHPLASFCWKPLIALYENGTAFKPVIVDLGDEHSRAAF 44
>UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 545
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 10 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 189
P++PGA+ L ++ + G P +F+ + S+PT +I++ H+L + +
Sbjct: 264 PSQPGALPALPTLLAPNPDGSKPMLVNFYPSGSVPTTPVTFASQILSSNHVLLGRNLAAS 323
Query: 190 SEATLLNM 213
S A ++++
Sbjct: 324 SGARVISI 331
>UniRef50_A2QZW5 Cluster: Similarity to AP1 protein from patent
US5811536-A - Arabidopsis thaliana; n=1; Aspergillus
niger|Rep: Similarity to AP1 protein from patent
US5811536-A - Arabidopsis thaliana - Aspergillus niger
Length = 446
Score = 32.7 bits (71), Expect = 8.9
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 73 GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL--V 246
GP +T AL++PT S+ +I+ + PGD GA + + + N S ++ L V
Sbjct: 25 GPLETLVSSALTLPTPDSRPVSKILAN-----PGD--GAPRSGSVQVKNRSTLNFWLFKV 77
Query: 247 VKQYMILELFLHLKFWTSN 303
KQ++ L LFL + F SN
Sbjct: 78 AKQHIYLGLFLAVVFSPSN 96
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 252 AVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGF 416
A YD GTI+ PE+L + + N LS+ YPT A+ +A +
Sbjct: 194 AAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,026,478
Number of Sequences: 1657284
Number of extensions: 11597880
Number of successful extensions: 29741
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 28841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29726
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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