Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30626
(698 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 4.2
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 7.3
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 7.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 9.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.7
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 341 SNSSLELGTEIFWFDVQNFRCKNS 270
S++ +E + ++WF V+ CK S
Sbjct: 389 SDAEIEKLSTVYWFTVEFGLCKES 412
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 8/30 (26%)
Frame = +2
Query: 368 WLPNYC-----FSPAF---HCQWFQEPFGH 433
W NYC +P HC W FGH
Sbjct: 79 WRSNYCDNKQQANPPISTEHCDWLYGIFGH 108
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 39 QWGNGTRTSW 10
Q+GNG TSW
Sbjct: 274 QFGNGLETSW 283
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 85 LSTPSNSNATKSSGLTSPLS 104
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 343 LATPAWNLARRSSGLMSRIS 284
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,942
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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