Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30626
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 161 6e-40
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 161 6e-40
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 161 6e-40
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 161 6e-40
AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p pro... 31 1.5
AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH0603... 31 1.5
AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA... 31 1.5
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 29 8.0
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 29 8.0
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 29 8.0
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 29 8.0
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 161 bits (392), Expect = 6e-40
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPGDK
Sbjct: 107 VRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLLNMLNISPFSYGL+V Q
Sbjct: 167 VGASEATLLNMLNISPFSYGLIVNQ 191
Score = 124 bits (300), Expect = 9e-29
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
KE+IKDPSKFA
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFA 276
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 161 bits (392), Expect = 6e-40
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPGDK
Sbjct: 107 VRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLLNMLNISPFSYGL+V Q
Sbjct: 167 VGASEATLLNMLNISPFSYGLIVNQ 191
Score = 124 bits (300), Expect = 9e-29
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
KE+IKDPSKFA
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFA 276
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 161 bits (392), Expect = 6e-40
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPGDK
Sbjct: 107 VRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLLNMLNISPFSYGL+V Q
Sbjct: 167 VGASEATLLNMLNISPFSYGLIVNQ 191
Score = 124 bits (300), Expect = 9e-29
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
KE+IKDPSKFA
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFA 276
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 161 bits (392), Expect = 6e-40
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDK 180
V+APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPGDK
Sbjct: 107 VRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDK 166
Query: 181 VGASEATLLNMLNISPFSYGLVVKQ 255
VGASEATLLNMLNISPFSYGL+V Q
Sbjct: 167 VGASEATLLNMLNISPFSYGLIVNQ 191
Score = 124 bits (300), Expect = 9e-29
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +3
Query: 255 VYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXX 434
VYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251
Query: 435 XXXXXXXXXXXXXXKEFIKDPSKFA 509
KE+IKDPSKFA
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFA 276
>AY118783-1|AAM50643.1| 993|Drosophila melanogaster GH13756p protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 22 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 147
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 925 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 963
>AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH06032
protein.
Length = 1225
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 22 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 147
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195
>AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA
protein.
Length = 1225
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 22 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 147
GA A L +++ +TGL PE T FF+ + PT K + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 595 SDDDMGFGLFD 627
SDDDMGFGLFD
Sbjct: 102 SDDDMGFGLFD 112
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 595 SDDDMGFGLFD 627
SDDDMGFGLFD
Sbjct: 102 SDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 595 SDDDMGFGLFD 627
SDDDMGFGLFD
Sbjct: 102 SDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 595 SDDDMGFGLFD 627
SDDDMGFGLFD
Sbjct: 102 SDDDMGFGLFD 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,995,591
Number of Sequences: 53049
Number of extensions: 543465
Number of successful extensions: 1173
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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