Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30625x
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 161 9e-39
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 161 9e-39
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 145 3e-34
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 139 3e-32
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 131 8e-30
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 120 1e-26
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 115 4e-25
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 104 1e-21
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 101 7e-21
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 96 3e-19
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 87 1e-16
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 81 1e-14
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 78 8e-14
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 61 1e-08
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 59 4e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 59 5e-08
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 58 1e-07
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 53 3e-06
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 51 1e-05
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 47 2e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 46 4e-04
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 46 5e-04
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 44 0.001
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 44 0.002
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 41 0.015
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 41 0.015
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 36 0.41
UniRef50_A0C0H4 Cluster: Chromosome undetermined scaffold_14, wh... 33 2.2
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 2.9
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 2.9
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 5.1
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q10SH0 Cluster: Fizzy-related protein, putative, expres... 32 6.7
UniRef50_Q6LF42 Cluster: PfEMP1 (Erythrocyte membrane protein 1 ... 32 6.7
UniRef50_Q16EJ7 Cluster: Putative uncharacterized protein; n=2; ... 32 6.7
UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Re... 32 6.7
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.7
UniRef50_A3I7L1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 161 bits (390), Expect = 9e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 75.8 bits (178), Expect = 4e-13
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 380
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 161 bits (390), Expect = 9e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 101 bits (242), Expect = 7e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 167
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 168 QGKLLAC 174
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 145 bits (352), Expect = 3e-34
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI DVV
Sbjct: 23 KKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN+IVV+DAT
Sbjct: 83 YNASNNELVRTKTLVKNSIVVIDAT 107
Score = 90.6 bits (215), Expect = 1e-17
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQ 428
PFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+Q
Sbjct: 108 PFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQ 167
Query: 429 FHTGRLLAC 455
F +GR+LAC
Sbjct: 168 FTSGRILAC 176
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 139 bits (336), Expect = 3e-32
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++DVV
Sbjct: 23 KKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNAS+NELVRTKTLVKNAIV VD T
Sbjct: 83 YNASSNELVRTKTLVKNAIVTVDPT 107
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 131 bits (316), Expect = 8e-30
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DV
Sbjct: 23 KKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDV 82
Query: 178 VYNASNNELVRTKTLVKNAIVVVDA 252
VYNASNNELVRT+TLVK+AIV VDA
Sbjct: 83 VYNASNNELVRTQTLVKSAIVQVDA 107
Score = 53.6 bits (123), Expect = 2e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVE 410
PF+QWY +HY + +GRKK A+ E E A K+S RK R+ ++
Sbjct: 109 PFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLD 168
Query: 411 GALEEQFHTGRLLAC 455
+EEQF +GRLLAC
Sbjct: 169 PHIEEQFGSGRLLAC 183
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 120 bits (290), Expect = 1e-26
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
K+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE + R++DVV
Sbjct: 23 KRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDA 252
YNA++NELVRTKTLVKN IV VDA
Sbjct: 83 YNATSNELVRTKTLVKNCIVAVDA 106
Score = 38.7 bits (86), Expect = 0.059
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Frame = +3
Query: 255 PFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYLARQR 395
PF++WY HY + L KK K A E A +K K S K R++ R+R
Sbjct: 108 PFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRR 167
Query: 396 LAKVEGALEEQFHTGRLLA 452
+VE A+ +Q GR+LA
Sbjct: 168 NHRVEKAIADQLREGRVLA 186
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 115 bits (277), Expect = 4e-25
Identities = 57/85 (67%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
+++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI+DV
Sbjct: 120 EEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDV 179
Query: 178 VYNASNNELVRTKTLVKNAIVVVDA 252
VY A+NNELVRT+TLVK+AIV VDA
Sbjct: 180 VYIATNNELVRTQTLVKSAIVQVDA 204
Score = 34.3 bits (75), Expect = 1.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEE 335
PF+QWY +HY + +GRKK + + ++
Sbjct: 206 PFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 104 bits (249), Expect = 1e-21
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+ T+I++VV
Sbjct: 23 KKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKGTKILNVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVD 249
YNAS+N+ VRT TLVK AI+ +D
Sbjct: 83 YNASDNDFVRTNTLVKGAIIEID 105
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 101 bits (242), Expect = 7e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 88 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 147
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 148 QGKLLAC 154
Score = 100 bits (240), Expect = 1e-20
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGG C TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRIIDVV 62
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 63 YNASNNELVRTKTLVKNCIVLIDST 87
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 96.3 bits (229), Expect = 3e-19
Identities = 51/101 (50%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Frame = +1
Query: 1 KKRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECST 153
KKRKY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 154 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATHSGSGMS 276
K RI+ VVYN+++NELVRT TLVK +V +D+ S +S
Sbjct: 83 HKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFKSALS 123
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 87.4 bits (207), Expect = 1e-16
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 23 KKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R +++ VV
Sbjct: 23 KKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDA 252
Y+ S+NELVRT TL K+++V + A
Sbjct: 83 YHPSSNELVRTNTLTKSSVVKISA 106
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 78.2 bits (184), Expect = 8e-14
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKR + GR +NT++G + + +R RGG K RAL L GNFS+ S T K +I+ V
Sbjct: 23 KKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVA 82
Query: 181 YNASNNELVRTKTLVKNAIVVVD 249
+N S+NELVRT TL K +IV +D
Sbjct: 83 FNESSNELVRTNTLTKGSIVYLD 105
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 60.9 bits (141), Expect = 1e-08
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 183
K++ E+GR A T +G +R VR+ GGN K RALRL+ S + T+KT+I V
Sbjct: 22 KKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEA 81
Query: 184 NASNNELVRTKTLVKNAIV 240
N+++ VR K L K AI+
Sbjct: 82 NSADPNYVRRKLLTKGAII 100
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 59.3 bits (137), Expect = 4e-08
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYLARQRL--AKV 407
PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+ RQ L A V
Sbjct: 11 PFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFETRQALPQANV 70
Query: 408 EGALEEQFHTGRLLAC 455
E +L+E+F TGRLLAC
Sbjct: 71 EESLKEEFVTGRLLAC 86
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.8 bits (136), Expect = 5e-08
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KK+ + G NT L I R RGGN K++A+ L G+F W + ++ ++I+ V
Sbjct: 16 KKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSV 75
Query: 178 VYNASNNELVRTKTLVKNAIVVVDA 252
+YN +N +LV+ + L K I+ +D+
Sbjct: 76 LYNQANLKLVQKRNLSKGTIIKIDS 100
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 183
KR+YELGR TRLG + + +RS GGN+K+ LR D N + +TRK +I V
Sbjct: 23 KRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKE 82
Query: 184 NASNNELVRTKTLVKNAIV 240
N+++ V+ + + ++
Sbjct: 83 NSADPHYVQRNIMNRGTVI 101
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKR++ELGR T+LG + V R+ GGNTK +T N SE +K +II V
Sbjct: 22 KKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKIITV 81
Query: 178 VYNASNNELVRTKTLVKNAIVVVD 249
N +N+ V+ + K ++ +
Sbjct: 82 KANPANSHYVQRNIINKGTVIATE 105
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 50.8 bits (116), Expect = 1e-05
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKRK ELGR +NTR+ Q + +R+ GGN K R N + RK RII V
Sbjct: 22 KKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSGKGRKVRIIRV 80
Query: 178 VYNASNNELVRTKTLVKNAIV 240
+ N +N + R + K AI+
Sbjct: 81 LENPANRQFARRNIITKGAII 101
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KRKYE+G P T L + I R+ GGN K R T N + + +K +I++++
Sbjct: 23 KRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAKKVKILEIL 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDA 252
+N EL R +++ A + +A
Sbjct: 83 ETPANKELARRGIIIRGAKIRTEA 106
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 183
KRK+ELGR +G Q++ + G +K R L+ D N + T+K ++ V
Sbjct: 22 KRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKMTTVTE 81
Query: 184 NASNNELVRTKTLVKNAIVVVD 249
N +N VR L K V +
Sbjct: 82 NPANKNYVRRNFLTKGTFVTTE 103
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 45.6 bits (103), Expect = 5e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KK K E+GRPAA T++ + + VR RG N K + + + N + +K + +V
Sbjct: 22 KKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQANKVCKKVVVTNV 81
Query: 178 VYNASNNELVRTKTLVKNAIV 240
+ N +N +R + K AI+
Sbjct: 82 IDNKANKHYIRRNVMTKGAII 102
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 183
KR E GR A TR+G + + +RG TK RA N + S++ ++ V+
Sbjct: 23 KRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTVLE 82
Query: 184 NASNNELVRTKTLVKNAIV 240
N +N+ VR + K AIV
Sbjct: 83 NGANSHFVRRNIITKGAIV 101
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 43.6 bits (98), Expect = 0.002
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 4 KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 174
KRKY GRP T L + VR+RGG+ K +A ++ S RK RI+
Sbjct: 24 KRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNPKTGEARKARILR 83
Query: 175 VVYNASNNELVRTKTLVKNAIV 240
+V ++ E R +VK A++
Sbjct: 84 IVETPAHREYARRGIIVKGAVI 105
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 40.7 bits (91), Expect = 0.015
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 252 NPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 431
N Q Y HY L +G KK A T ++ +++ RK RQ+ K++ +EEQF
Sbjct: 41 NAIIQRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKLEKRQQDHKLDPHIEEQF 96
Query: 432 HTGRLLA 452
+GRLLA
Sbjct: 97 GSGRLLA 103
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 40.7 bits (91), Expect = 0.015
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSECSTRKTRIID 174
KKRK+E+G P T +G +R + R GGN K + L+ T N + + RI +
Sbjct: 22 KKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGEVKCVRIEE 80
Query: 175 VVYNASNNELVRTKTLVKNAIV 240
VV N ++ R + K AI+
Sbjct: 81 VVKNPASQYYERHGVITKGAII 102
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 35.9 bits (79), Expect = 0.41
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +1
Query: 4 KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 183
+RKYE+ R G Q + + RG TK +D N + +K++I+ V+
Sbjct: 24 RRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGAKVKKSKIVKVLE 82
Query: 184 NASNNELVRTKTLVKNAIV 240
N +NN+ R + + A++
Sbjct: 83 NPTNNDYRRRGVITRGAVL 101
>UniRef50_A0C0H4 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 253
Score = 33.5 bits (73), Expect = 2.2
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 243 SRCNPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGAL 419
SRC PF+ +S Y G K+ + E E+ + K+++ K + Y+A+ R + A+
Sbjct: 15 SRCQPFQFINQSKYGFSNGEKEKGEFAEKEQTNLEKQKTSK-KQGYVAKMREEVITNAI 72
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 321 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 431
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 2.9
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 270 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 425
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 5.1
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 306 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 413
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 5.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 203 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 114
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_Q10SH0 Cluster: Fizzy-related protein, putative,
expressed; n=4; Oryza sativa|Rep: Fizzy-related protein,
putative, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 523
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 61 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 240
+H + + GG T R +R + C +++ ++V++ + NELV T +N I+
Sbjct: 392 LHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQII 451
Query: 241 V 243
V
Sbjct: 452 V 452
>UniRef50_Q6LF42 Cluster: PfEMP1 (Erythrocyte membrane protein 1
(Pfemp1)); n=1; Plasmodium falciparum 3D7|Rep: PfEMP1
(Erythrocyte membrane protein 1 (Pfemp1)) - Plasmodium
falciparum (isolate 3D7)
Length = 2394
Score = 31.9 bits (69), Expect = 6.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 QECN-CCSRCNPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQ 392
QECN C C+PF W ++ L +KK K E +E KK S T A++
Sbjct: 353 QECNDCLVACDPFVHWIDNEKLEFLKQKKKYK-NEIKEREPTKKTSHGTINNMYAKE 408
>UniRef50_Q16EJ7 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 610
Score = 31.9 bits (69), Expect = 6.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 222 CQECNCCSRCNPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQK 365
C + CC R F +Y H L G+K A++ A +I R+++
Sbjct: 419 CGDYVCCKRDFKFHTFYNKHMFLVHGQKTNARVKPASNQLIANMRAER 466
>UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Rep:
AGL211Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 612
Score = 31.9 bits (69), Expect = 6.7
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 258 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 437
F W +SH +PL R++ ++ E NK+R +K + L R + + ALE +
Sbjct: 512 FTNWEDSHIGVPLSREEVTEINTKEVEAANKER-EKAVEEELQEAR-ERQKQALEAKRGP 569
Query: 438 GRLL 449
G++L
Sbjct: 570 GKIL 573
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 31.9 bits (69), Expect = 6.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 67 SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAI 237
+V++ G + + L N +W + R + + V N + N R T+VKN I
Sbjct: 229 TVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTVVKNDI 285
>UniRef50_A3I7L1 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 590
Score = 31.5 bits (68), Expect = 8.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 278 RLIPLPEWVASTTTIAFLTRVFVRTNSLLDALYTTSMIRV 159
RL+P V + T+AFL VFV SLL A+++ M+ +
Sbjct: 251 RLLPNAALVTAGLTLAFLEMVFVVLFSLLQAMFSQVMVAI 290
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,853,629
Number of Sequences: 1657284
Number of extensions: 7681501
Number of successful extensions: 23364
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 22685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23352
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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