Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30625x
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 131 3e-31
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 130 4e-31
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 33 0.14
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 32 0.25
01_02_0013 + 10162478-10163581 30 1.0
03_05_0736 - 27254502-27255497 29 1.8
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 2.3
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460... 28 4.1
04_04_0195 - 23488490-23488891,23489016-23489243,23489348-234894... 27 5.4
07_01_0556 - 4136000-4136608 27 7.2
12_02_0152 - 14477844-14478085,14478201-14478285 27 9.5
09_02_0401 - 8575886-8575935,8576518-8576617,8576798-8576959,857... 27 9.5
06_03_0451 - 20925100-20926734 27 9.5
06_02_0131 + 12161268-12161781,12162123-12162867,12162950-121629... 27 9.5
03_05_0151 - 21284751-21284800,21285422-21285521,21285702-212858... 27 9.5
01_07_0007 + 40378472-40378636,40378726-40378858,40378941-403791... 27 9.5
01_03_0226 - 13962764-13964048,13964256-13964750,13965854-13966623 27 9.5
01_01_1134 + 8994315-8995892 27 9.5
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 131 bits (316), Expect = 3e-31
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DV
Sbjct: 23 KKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDV 82
Query: 178 VYNASNNELVRTKTLVKNAIVVVDA 252
VYNASNNELVRT+TLVK+AIV VDA
Sbjct: 83 VYNASNNELVRTQTLVKSAIVQVDA 107
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 25/92 (27%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGA-------------------------KLTEAEEAIINKKRS 359
PF+QWY +HY + +GRKK A K +AE K+S
Sbjct: 109 PFKQWYLTHYGVDIGRKKKAPAAKKDAEHALGKIRCLFIGLYVMLKGQDAEATTEEAKKS 168
Query: 360 QKTARKYLARQRLAKVEGALEEQFHTGRLLAC 455
RK RQ+ ++ +EEQF +GRLLAC
Sbjct: 169 NHVVRKLEKRQQGRTLDAHIEEQFGSGRLLAC 200
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 130 bits (315), Expect = 4e-31
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 177
KKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DV
Sbjct: 23 KKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALRLDTGNYSWGSEAVTRKTRILDV 82
Query: 178 VYNASNNELVRTKTLVKNAIVVVDA 252
VYNASNNELVRT+TLVK+AIV VDA
Sbjct: 83 VYNASNNELVRTQTLVKSAIVQVDA 107
Score = 57.6 bits (133), Expect = 4e-09
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLT--------EAEEAIINKKRSQKTARKYLARQRLAKVE 410
PF+QWY +HY + +GRKK A E E A K+S RK RQ+ ++
Sbjct: 109 PFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLD 168
Query: 411 GALEEQFHTGRLLAC 455
+EEQF +GRLLAC
Sbjct: 169 SHIEEQFGSGRLLAC 183
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 7 RKYELGRPAANTRLGPQRIHSVRSR----GGNTKYRALRLDTGN-FSWGS 141
R+ +LG P+ +T+ P+R+ S+++R K+ A DTG F+WGS
Sbjct: 271 REGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVADTGEVFTWGS 320
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 61 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 240
+H + + GG T R +R + C +++ ++V++ + NELV T +N I+
Sbjct: 376 LHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQII 435
Query: 241 V 243
V
Sbjct: 436 V 436
>01_02_0013 + 10162478-10163581
Length = 367
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 86 EILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQRPLSRMQLL 241
E +S RC P+ G R + A SL + ++HL +C RPL + L
Sbjct: 240 EYMSPERCA--PMAMAGARVARAADVWSLGITVLHLYQGYCPARPLPSKRTL 289
>03_05_0736 - 27254502-27255497
Length = 331
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 234 NCCSRCNPFRQWYESHY--TLPLGRKKGAKLTEA 329
N C R PFR Y +LPLGR A+ TEA
Sbjct: 162 NACRRRLPFRSTYRDLIGPSLPLGRAAAAEATEA 195
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 44 GSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMN 202
G + P + VV + + C+W + SLG R Q++K + L ++ + +N
Sbjct: 270 GHQMVTINPLLSVVAA-TVIPCMWLVIASLGRRLRQISKEAHISLAMLTVYLN 321
>04_04_0799 +
28143878-28145042,28145127-28145290,28146008-28146070,
28146268-28146491,28146850-28147555
Length = 773
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 306 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 437
KG+KL + E + + R++ A R LA GAL + H+
Sbjct: 4 KGSKLEDQEAVALCRGRAELLAAAVRHRYALADAHGALADSLHS 47
>04_04_0195 -
23488490-23488891,23489016-23489243,23489348-23489481,
23489685-23489899,23490049-23490142,23490293-23490526,
23490643-23490736
Length = 466
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 302 PPKRQRIMRLIPLPEWVASTTTIAFLTRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKL 123
PP R ++R+ +VASTT +A F +LL AL + VE Q +
Sbjct: 369 PPCRVNLLRVCFRTVYVASTTAVALAFPYFNEVLALLGALNFWPLAIYFPVEMYFIQRHV 428
Query: 122 PVSRRSARYLV 90
P R S R++V
Sbjct: 429 P--RWSPRWVV 437
>07_01_0556 - 4136000-4136608
Length = 202
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 19 LGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 129
LG A+T R HS + RGG+T R + DT +F
Sbjct: 166 LGLILASTATWLARRHSAKVRGGSTVIRPVSGDTDDF 202
>12_02_0152 - 14477844-14478085,14478201-14478285
Length = 108
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +3
Query: 201 IGAYKDP-CQECNCCSRCNP 257
+G P C +C CCS+ NP
Sbjct: 60 VGTLAAPLCLQCRCCSKANP 79
>09_02_0401 -
8575886-8575935,8576518-8576617,8576798-8576959,
8577106-8577253,8577436-8577458,8577615-8577685,
8577792-8577878,8578039-8578470,8578574-8579009
Length = 502
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 49 GPQRIHSVRSRGGNTKYRALRLDTGNFS 132
G +R HS+ GG+ Y L TG FS
Sbjct: 177 GSERPHSISIDGGSLSYDQLAAATGGFS 204
>06_03_0451 - 20925100-20926734
Length = 544
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 425 LF*STLNLSKTLPCQVFSCCLLTSLLVDN 339
++ S N S+ LP + C LL L++DN
Sbjct: 394 IYASNNNFSRNLPANLGDCVLLQELVLDN 422
>06_02_0131 +
12161268-12161781,12162123-12162867,12162950-12162986,
12163083-12163216,12163298-12163625
Length = 585
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = -3
Query: 287 RIMRLIPLPEWVASTTTIAFLTRVFVRTNS---LLDALYTTSMIRVLRVEHSDPQEKLPV 117
R M + + + ST ++ FL + T + +L+ +YT ++ EH DP + +
Sbjct: 383 RNMDFLEVKSGLQSTQSLPFLEEHDMSTEAFEKVLEYMYTDNL------EHMDPNQAEEL 436
Query: 116 SRRSARYLVFP 84
++RYL+FP
Sbjct: 437 FDIASRYLLFP 447
>03_05_0151 -
21284751-21284800,21285422-21285521,21285702-21285863,
21286010-21286157,21286286-21286362,21286519-21286589,
21286696-21286782,21286943-21287374,21287478-21287913
Length = 520
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 49 GPQRIHSVRSRGGNTKYRALRLDTGNFS 132
G +R HS+ GG+ Y L TG FS
Sbjct: 177 GSERPHSISIDGGSLSYDQLAAATGGFS 204
>01_07_0007 +
40378472-40378636,40378726-40378858,40378941-40379111,
40379295-40379373,40379477-40379590,40379664-40379730,
40379819-40379924,40380009-40380067,40380258-40380367,
40380455-40380588,40380717-40380802,40380930-40381019,
40381104-40381283
Length = 497
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 142 ECSTRKTRIIDVVYNASNNELVRTKTLVK--NAIVVVDATH 258
EC+T T I+D ++ + + + L K N + VVD H
Sbjct: 250 ECATVDTPILDALHTMHDGKFLHLPVLDKDGNVVTVVDVLH 290
>01_03_0226 - 13962764-13964048,13964256-13964750,13965854-13966623
Length = 849
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -3
Query: 266 LPEWVASTTTIAFLTRVFVRTNSL----LDALYTTSMIRVLRVEHSDPQEKLPVSR 111
LP W+A++ + L + ++ L +DAL ++R LRVE + +E + + R
Sbjct: 688 LPAWIAASV-VPRLAVLLIQVRELRQVDIDALGKLPVLRTLRVEPYEMKEMIVIGR 742
>01_01_1134 + 8994315-8995892
Length = 525
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 121 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDAT 255
G FS C+ RK +DV + RT +N+ VV D+T
Sbjct: 146 GLFSRDCPCAGRKAVTVDVASEPRSPATPRTHARFENSHVVADST 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,993,580
Number of Sequences: 37544
Number of extensions: 217662
Number of successful extensions: 734
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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