Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30625x
(457 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles ... 89 5e-20
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 27 0.41
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 24 2.9
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 24 2.9
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 24 2.9
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 23 3.9
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 6.7
AJ973473-1|CAJ01520.1| 127|Anopheles gambiae hypothetical prote... 22 8.9
AF437891-1|AAL84186.1| 127|Anopheles gambiae sensory appendage ... 22 8.9
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 22 8.9
>U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S8 mRNA, complete cds.
).
Length = 135
Score = 89.4 bits (212), Expect = 5e-20
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +3
Query: 252 NPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 431
+PFRQWYESHY LPLG+K+ +L EE +++KKR++ RKY+ RQ+ AK++ A+EEQF
Sbjct: 36 SPFRQWYESHYLLPLGKKR--ELKAGEEDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQF 93
Query: 432 HTGRLLAC 455
+ GRLLAC
Sbjct: 94 NAGRLLAC 101
Score = 64.5 bits (150), Expect = 2e-12
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +1
Query: 154 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDAT 255
RK RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+
Sbjct: 3 RKARIIDVVYNASNNELIRTKTLVKNAIIVIDAS 36
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 26.6 bits (56), Expect = 0.41
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 187 ASNNELVRTKTLVKNAIVVVDATHSGSGMS 276
+SNN+ + + VKNA+V D H S MS
Sbjct: 843 SSNNDYIGSLVQVKNALVSSDHHHGRSTMS 872
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 243 YNNCILDKGLCTHQ 202
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 243 YNNCILDKGLCTHQ 202
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 243 YNNCILDKGLCTHQ 202
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 23.4 bits (48), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 58 RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI---IDVVYNASNNELVRTKTLVK 228
R ++ +GG R + LD +F WGSE + TR + +V++ + + +
Sbjct: 94 RDSAITMQGGGLGGRFV-LDQMHFHWGSEHTLDDTRYGLELHLVHHDTRYASLEDAVQAR 152
Query: 229 NAIVVVDAT-HSGS 267
N + V+ H GS
Sbjct: 153 NGVAVLGVLFHVGS 166
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 6.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 32 LQTPGSVLSVSTPFVHVVEILSTV 103
+ TP +++STPF+ +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550
>AJ973473-1|CAJ01520.1| 127|Anopheles gambiae hypothetical protein
protein.
Length = 127
Score = 22.2 bits (45), Expect = 8.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 243 YNNCILDKGLCT 208
Y C+LD+G CT
Sbjct: 43 YYKCLLDQGRCT 54
>AF437891-1|AAL84186.1| 127|Anopheles gambiae sensory appendage
protein protein.
Length = 127
Score = 22.2 bits (45), Expect = 8.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 243 YNNCILDKGLCT 208
Y C+LD+G CT
Sbjct: 43 YYKCLLDQGRCT 54
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 22.2 bits (45), Expect = 8.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRS----QKTARKYLA 386
G +KG EA A++ K+RS ++T +Y A
Sbjct: 507 GFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCA 540
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,835
Number of Sequences: 2352
Number of extensions: 8857
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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