Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30625x
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 161 1e-39
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 161 1e-39
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 161 1e-39
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 161 1e-39
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 101 1e-21
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 56 6e-08
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 2.5
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 2.5
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 2.5
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 2.5
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 5.7
X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein... 29 7.6
BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sp... 29 7.6
BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sp... 29 7.6
BC022530-1|AAH22530.1| 493|Homo sapiens activin A receptor, typ... 29 7.6
AY127050-1|AAM93495.1| 493|Homo sapiens activin receptor-like k... 29 7.6
AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein FL... 29 7.6
AF525679-1|AAP21993.1| 443|Homo sapiens truncated activin recep... 29 7.6
AC079750-1|AAX88951.1| 468|Homo sapiens unknown protein. 29 7.6
BC014311-1|AAH14311.1| 376|Homo sapiens FCHO2 protein protein. 29 10.0
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 161 bits (390), Expect = 1e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 101 bits (242), Expect = 1e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 167
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 168 QGKLLAC 174
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 161 bits (390), Expect = 1e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 101 bits (242), Expect = 1e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 167
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 168 QGKLLAC 174
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 161 bits (390), Expect = 1e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 101 bits (242), Expect = 1e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 167
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 168 QGKLLAC 174
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 161 bits (390), Expect = 1e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVV 82
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 83 YNASNNELVRTKTLVKNCIVLIDST 107
Score = 101 bits (242), Expect = 1e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 108 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 167
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 168 QGKLLAC 174
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 101 bits (242), Expect = 1e-21
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +3
Query: 255 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFH 434
P+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 88 PYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQ 147
Query: 435 TGRLLAC 455
G+LLAC
Sbjct: 148 QGKLLAC 154
Score = 100 bits (240), Expect = 2e-21
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +1
Query: 1 KKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 180
KKRKYELGRPAANT++GP+RIH+VR RGG C TRKTRIIDVV
Sbjct: 23 KKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRIIDVV 62
Query: 181 YNASNNELVRTKTLVKNAIVVVDAT 255
YNASNNELVRTKTLVKN IV++D+T
Sbjct: 63 YNASNNELVRTKTLVKNCIVLIDST 87
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 56.0 bits (129), Expect = 6e-08
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +3
Query: 318 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 455
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLAC 46
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 443
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 443
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 443
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 443
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 164 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 66
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
>X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein
protein.
Length = 250
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 219 PCQECNCCSRCNPFRQWYESHYTLPLGRK 305
PC CN CS CNP + + P G +
Sbjct: 214 PCNPCNPCSPCNPCSPYDPCNPCYPCGSR 242
>BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 219 PCQECNCCSRCNPFRQWYESHYTLPLGRK 305
PC CN CS CNP + + P G +
Sbjct: 214 PCNPCNPCSPCNPCSPYDPCNPCYPCGSR 242
>BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 219 PCQECNCCSRCNPFRQWYESHYTLPLGRK 305
PC CN CS CNP + + P G +
Sbjct: 214 PCNPCNPCSPCNPCSPYDPCNPCYPCGSR 242
>BC022530-1|AAH22530.1| 493|Homo sapiens activin A receptor, type
IC protein.
Length = 493
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 136 GSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATHSGSGMSRII 285
G +CS RK + +V S LV +K+ I V A+ SGSG+ ++
Sbjct: 138 GRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLV 187
>AY127050-1|AAM93495.1| 493|Homo sapiens activin receptor-like
kinase 7 protein.
Length = 493
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 136 GSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATHSGSGMSRII 285
G +CS RK + +V S LV +K+ I V A+ SGSG+ ++
Sbjct: 138 GRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLV 187
>AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein
FLJ11749 variant protein.
Length = 201
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 443
GRKK +++TE +AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQGKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AF525679-1|AAP21993.1| 443|Homo sapiens truncated activin
receptor-like kinase 7 protein.
Length = 443
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 136 GSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATHSGSGMSRII 285
G +CS RK + +V S LV +K+ I V A+ SGSG+ ++
Sbjct: 88 GRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLV 137
>AC079750-1|AAX88951.1| 468|Homo sapiens unknown protein.
Length = 468
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 136 GSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATHSGSGMSRII 285
G +CS RK + +V S LV +K+ I V A+ SGSG+ ++
Sbjct: 113 GRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLV 162
>BC014311-1|AAH14311.1| 376|Homo sapiens FCHO2 protein protein.
Length = 376
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 300 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVE 410
+K+GA E E+A + K++ T + Y+ + LAK +
Sbjct: 152 KKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKAD 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,001,365
Number of Sequences: 237096
Number of extensions: 1261242
Number of successful extensions: 2940
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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