Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30624x
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 137 DAAPTCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWPTQ 262
           D     C+    R+ K+ +  +PS +R  W  C   A W  Q
Sbjct: 103 DKVTVFCNRDLGRE-KQFIVKLPSAERVAWMWCLIFAFWVPQ 143


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 137 DAAPTCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWPTQ 262
           D     C+    R+ K+ +  +PS +R  W  C   A W  Q
Sbjct: 103 DKVTVFCNRDLGRE-KQFIVKLPSAERVAWMWCLIFAFWVPQ 143


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 137 DAAPTCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWPTQ 262
           D     C+    R+ K+ +  +PS +R  W  C   A W  Q
Sbjct: 103 DKVTVFCNRDLGRE-KQFIVKLPSAERVAWMWCLIFAFWVPQ 143


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 137 DAAPTCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWPTQ 262
           D     C+    R+ K+ +  +PS +R  W  C   A W  Q
Sbjct: 103 DKVTVFCNRDLGRE-KQFIVKLPSAERVAWMWCLIFAFWVPQ 143


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 RKMPLRRAVRYLKNVIEKKECIPFR 206
           R +PLR AV ++ ++I     +P R
Sbjct: 59  RALPLRSAVEHIPDLIADSRRLPLR 83


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 225 GRCAQAKQFGQHRVAGPRNPPNSSCSY 305
           G  A       H+  GPR+PP+ S  +
Sbjct: 341 GYSAMGMAAPHHQNFGPRHPPDCSMEF 367


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 230 LCSSKAVWP 256
           LCS  A+WP
Sbjct: 71  LCSEPAIWP 79


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 62  IMQSAWFKPPCSL 100
           ++QS W  P C L
Sbjct: 559 VLQSLWASPTCDL 571


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 475 AETYFDVAGRRHVGVDATVST 413
           A  +FD++    +G+ AT++T
Sbjct: 325 AANFFDISRSTFLGILATITT 345


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 427 HQPLHVVSLPHRSMSQRTRRC 489
           HQ  H  ++ H  +S    RC
Sbjct: 314 HQQHHQQNMSHEELSAMVNRC 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,790
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)