Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30624x
(500 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995... 128 2e-30
09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433... 125 2e-29
06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392 31 0.39
02_05_0384 - 28501536-28501777,28502408-28502630 29 1.6
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 29 2.8
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 29 2.8
08_02_0593 + 19078264-19078609,19078724-19082256 28 3.7
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087... 28 3.7
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138... 28 4.8
05_05_0385 + 24566916-24567503,24568609-24568824,24568916-245692... 28 4.8
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 27 6.4
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211... 27 6.4
11_06_0284 + 21909758-21913645 27 8.5
09_02_0608 + 11194889-11195134,11195185-11195406 27 8.5
07_03_1624 + 28204892-28205024,28205160-28205242,28205305-282053... 27 8.5
06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796 27 8.5
>08_02_1361 -
26398987-26399019,26399320-26399387,26399458-26399560,
26399658-26399888,26400791-26400826,26400891-26400931,
26401028-26401064,26401158-26401160
Length = 183
Score = 128 bits (310), Expect = 2e-30
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +2
Query: 260 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRATCLRRRTYRAHGRINPY 439
QGRWP KSA F+L LL+NAESNAD K LDVD L + HIQVN+A RRRTYRAHGRINPY
Sbjct: 93 QGRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRAHGRINPY 152
Query: 440 MSSPCHIEVCLSEREDAVAR 499
MSSPCH+E+ LSE+E+AV +
Sbjct: 153 MSSPCHVELILSEKEEAVKK 172
Score = 93.1 bits (221), Expect = 1e-19
Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
Frame = +3
Query: 24 MGRYSREPDNPAKSCKARGSNLRVHFK------------NTYETAMAIRKMPLRRAVRYL 167
MG+YS EP NP KS KA G +LRVHFK NT ETA A+RK+PL +A RYL
Sbjct: 1 MGKYSTEPSNPTKSAKAMGRDLRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYL 60
Query: 168 KNVIEKKECIPFRRFNGGVGRCAQAK 245
++VI K+ IPFRR+ GGVGR AQ K
Sbjct: 61 EDVIAHKQAIPFRRYCGGVGRTAQVK 86
>09_02_0105 -
4337047-4337079,4337175-4337242,4337323-4337425,
4337507-4337737,4339307-4339347,4339437-4339473,
4339603-4339605
Length = 171
Score = 125 bits (301), Expect = 2e-29
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = +2
Query: 260 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRATCLRRRTYRAHGRINPY 439
QGRWP KSA F+L LL+NAESNA+ K LDVD L + HIQVN+A RRRTYRAHGRINPY
Sbjct: 81 QGRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQVNQAQKQRRRTYRAHGRINPY 140
Query: 440 MSSPCHIEVCLSEREDAVAR 499
MSSPCHIE+ LSE+E+ V +
Sbjct: 141 MSSPCHIELILSEKEEPVKK 160
Score = 104 bits (250), Expect = 3e-23
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = +3
Query: 24 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 203
M +YSRE +NP KS KA G +LRVHFKNT ETA AIRK+PL +A RYL++VI K+ IPF
Sbjct: 1 MVKYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPF 60
Query: 204 RRFNGGVGRCAQAK 245
RR+ GGVGR AQAK
Sbjct: 61 RRYCGGVGRTAQAK 74
>06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392
Length = 443
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 364 RPHSGKSRDLPTQTYIPCSRSHQPLHVVSLPHRSMS 471
+PHSG D+P +Y+ HQ LH+V P +++
Sbjct: 7 QPHSGGCDDMPFDSYVQ-QNGHQELHLVDHPFNNVT 41
>02_05_0384 - 28501536-28501777,28502408-28502630
Length = 154
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/93 (21%), Positives = 37/93 (39%)
Frame = +2
Query: 188 RVYSIPSLQRRRWSLCSSKAVWPTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVID 367
+ S+ SL+RRR LCS + Q + + + F+ L +A K L + +
Sbjct: 62 KALSVASLRRRRPVLCSEISSLINQVIFEQFLSIFVCNLCIHARKQQPQKPLRLSAYAVQ 121
Query: 368 HIQVNRATCLRRRTYRAHGRINPYMSSPCHIEV 466
+ T + Y ++ P S H+ +
Sbjct: 122 RKETTATTKTQYTCYLKRNKLRPSNSLQVHVPI 154
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 227 TNAAVEA-TEWNTLFLFNHVFEV-TNSTSERHLSDCH 123
TN +A WN + L N ++ + T+STSER + D H
Sbjct: 2527 TNMLSQAYASWNNISLGNELYRMETSSTSERSILDVH 2563
>04_03_0496 + 16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 363 ITSLSTSKVLLSAFDSAFLNNCKRNSADFLGQRPCVGQTALLEHSDQ 223
I + S +KVL+ + LNNC D + Q C +L +H+ +
Sbjct: 1672 ILNHSANKVLIEPAKAIILNNCLALLMDGIVQEACAKGPSLFQHNQE 1718
>08_02_0593 + 19078264-19078609,19078724-19082256
Length = 1292
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 359 LACQRPKFCCQRLIQRSSITARGIRRISWASDPVLAKL 246
+ C+R +F C+ L+ + IRR+ A+D ++ KL
Sbjct: 785 MLCRRFQFICRALLHAVEQGSLKIRRVDLAADKIIRKL 822
>04_04_1229 -
31906854-31907300,31907986-31908181,31908631-31908756,
31909962-31910329,31910680-31910835,31910968-31911168,
31911230-31911375,31911439-31911865,31912527-31912627,
31913197-31913254
Length = 741
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 114 ETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGQHRVAG 272
E A +++ + L A Y KN++ EC+P R+ GG+ +A + +AG
Sbjct: 416 ENAPSLKCITLDTANFYDKNLLTMGECLPMRK--GGILEARKAFDAAKRYIAG 466
>11_03_0158 +
10911997-10912078,10912203-10912288,10913780-10913857,
10913967-10914098,10914385-10914435,10914529-10914669,
10914754-10914876,10914989-10915066,10915448-10915541,
10915633-10915739,10915936-10916019,10916649-10916744,
10916835-10917023,10917705-10917780,10918507-10918610,
10918708-10918967,10920000-10920086,10920184-10920411,
10920752-10920826,10921264-10921346,10921552-10921661
Length = 787
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/65 (21%), Positives = 28/65 (43%)
Frame = +3
Query: 21 IMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIP 200
++ + + + K C RGS +R+H KN + P RR + +++ + I
Sbjct: 530 VLAKMAERDEGTLKDCAQRGSFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKIS 589
Query: 201 FRRFN 215
F+
Sbjct: 590 VLHFS 594
>05_05_0385 +
24566916-24567503,24568609-24568824,24568916-24569241,
24569906-24570338,24570769-24571281
Length = 691
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -1
Query: 335 CCQRLIQRSSITARGIRRISWASDPVLAKLLCLSTATNAAVEATEWNTLFLFN 177
C L +++ + G R++W + A+ +CLS+ N A +W + + N
Sbjct: 307 CVDPLYYGAAVASVGGDRLAWGGNAT-ARNVCLSSGDNYQYGAYKWTVMLVSN 358
>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
Length = 542
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 236 SSKAVWPTQGRW--PKKSAEFLLQLLRNAESNADNKTLDVDRLVID 367
SS A WP Q RW P + +L E K LD R +D
Sbjct: 193 SSSAPWPCQVRWGGPPSKSSIADPVLTGEEEKWAAKLLDKHRAAVD 238
>03_01_0273 -
2107778-2108772,2108857-2109043,2109121-2110575,
2110670-2111251
Length = 1072
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 215 RRRWSLCS-SKAVWPTQGRWPKKSAEFLLQLLRNAESN 325
R W++ S V P +GR P SAE + Q +R E N
Sbjct: 142 RAMWAMSQPSTPVSPGKGRRPMTSAEIMRQQMRVTEQN 179
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 119 RNGNQKDAAPTCCSLPQKRD*KERVYSIPSLQ 214
+ GN K A T CS P +D E + +P LQ
Sbjct: 1164 KGGNNKLAKVTLCSTPLNQDDLEVLAKLPKLQ 1195
>09_02_0608 + 11194889-11195134,11195185-11195406
Length = 155
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 384 ARPAYADVHTVLTVASTPTCRLPATS 461
AR A +D+ T+L + + P RLP TS
Sbjct: 24 ARRALSDLQTILGLGAAPPQRLPQTS 49
>07_03_1624 +
28204892-28205024,28205160-28205242,28205305-28205376,
28205889-28205946,28206554-28206603,28207805-28207873,
28208183-28208317,28208410-28208581,28208663-28208754,
28208837-28209244,28209783-28210704,28211592-28211831,
28211898-28212229,28212460-28212608,28213265-28213841,
28214078-28214224,28214693-28214968,28215296-28215403,
28215634-28215839,28216079-28216217,28216329-28216982,
28218040-28218099,28218234-28218388,28218414-28218636,
28218729-28218773
Length = 1834
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 275 WASDPVLAKLLCLSTATNAAVEATEWN 195
W S V L+ S+AT+ +E T WN
Sbjct: 214 WISSTVPHSLILASSATSHCMEGTNWN 240
>06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796
Length = 478
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 215 RRRWSLCSSKAVWPTQGRW--PKKSAEFLLQLLRNAESNADNKTL 343
+ ++ L SS A WP RW P+K A F +L AE + K L
Sbjct: 102 KEQFILVSSPAPWPCPVRWGKPRKHANF-PPVLTTAEKDMATKLL 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,047
Number of Sequences: 37544
Number of extensions: 286148
Number of successful extensions: 780
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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