Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30624x
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   4.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   4.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.7  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 410 MYVCVGRSRDLPECGR*LACQR 345
           ++  VGR+R +P+CG  L  +R
Sbjct: 124 LFYNVGRNRTVPKCGGALISER 145


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = +2

Query: 191 VYSIPSLQRRRWSLCSSKAVWPTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDH 370
           VYS+    RRRWSLC  K  +  Q    ++S      LL    S +    L + +L +DH
Sbjct: 24  VYSV----RRRWSLC-QKLHFRDQVCCVQRSPPHWPYLL--CSSCSAMPALKILQLNVDH 76

Query: 371 IQVNRATCLR-RRTYRA 418
            +  +A  L+  R +RA
Sbjct: 77  CREGQALALQAAREHRA 93


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 320  IQRSSITARGIRRISWASDPVLAKLLCLSTATNAAVEATE 201
            IQ ++     + ++ W  D      L  ST+  AAV A +
Sbjct: 1002 IQEAARRITTVLQLRWREDKAALNALANSTSAEAAVNAEQ 1041


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,788
Number of Sequences: 2352
Number of extensions: 10635
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)