BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30623 (643 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 137 5e-33 AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 31 0.53 Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 29 3.7 Z47356-4|CAA87417.1| 431|Caenorhabditis elegans Hypothetical pr... 29 3.7 AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 28 4.9 Z19154-8|CAE17741.1| 335|Caenorhabditis elegans Hypothetical pr... 28 6.5 >U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a regulatory a subunitprotein 1 protein. Length = 590 Score = 137 bits (332), Expect = 5e-33 Identities = 64/100 (64%), Positives = 77/100 (77%) Frame = +1 Query: 1 AAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAGGDWFTSRTSACGLFSVCYP 180 A VEETVVRDKAV SLR +A+ HS +LEEHFVP+++RLA GDWFTSRTSACGLFSV YP Sbjct: 99 ATVEETVVRDKAVESLRKIADKHSSASLEEHFVPMLRRLATGDWFTSRTSACGLFSVVYP 158 Query: 181 RVSAPVKAELRQHFRSLCQDDTPMVAALLPTNLESLRKLW 300 RVS +K+EL+ FR+LC+DDTPMV L K++ Sbjct: 159 RVSPAIKSELKSMFRTLCRDDTPMVRRAAAAKLGEFAKVF 198 Score = 55.2 bits (127), Expect = 4e-08 Identities = 35/84 (41%), Positives = 42/84 (50%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 RRAAA KLGEFAKV E V L L D+QDSVR + + Sbjct: 184 RRAAAAKLGEFAKVFEKTAVIEGLHSSLTDLHVDEQDSVRLLTVESAIAFGTLLDKANKK 243 Query: 435 QHVMPTVRALSGDASWRVRYMVAD 506 + + P + L D SWRVRYMVA+ Sbjct: 244 KLIEPILIELFDDKSWRVRYMVAE 267 Score = 35.9 bits (79), Expect = 0.025 Identities = 20/80 (25%), Positives = 33/80 (41%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 R + L ++ + E + +++PI L EDD +VR TP + Sbjct: 500 RMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLT 559 Query: 435 QHVMPTVRALSGDASWRVRY 494 V P + L D+ + VRY Sbjct: 560 SEVKPLLEKLGKDSDFDVRY 579 >AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily assigned gene nameprotein 192 protein. Length = 2957 Score = 31.5 bits (68), Expect = 0.53 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 459 HVQLASHAAPYPQESIEPQQPRRLRQPADERNLDHP 352 H Q + + YPQ+ +PQ P + +QPA HP Sbjct: 509 HAQHQQNMSGYPQQQQQPQHPHQHQQPASVPMQHHP 544 >Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein F16A11.3b protein. Length = 1364 Score = 29.5 bits (63), Expect = 2.1 Identities = 14/64 (21%), Positives = 28/64 (43%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 R++ ++ + E A ++ E DL+P+F L D VR +PE + Sbjct: 880 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 939 Query: 435 QHVM 446 + ++ Sbjct: 940 EMIL 943 >Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein F16A11.3a protein. Length = 1490 Score = 29.5 bits (63), Expect = 2.1 Identities = 14/64 (21%), Positives = 28/64 (43%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 R++ ++ + E A ++ E DL+P+F L D VR +PE + Sbjct: 1006 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 1065 Query: 435 QHVM 446 + ++ Sbjct: 1066 EMIL 1069 >Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein F16A11.3b protein. Length = 1364 Score = 29.5 bits (63), Expect = 2.1 Identities = 14/64 (21%), Positives = 28/64 (43%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 R++ ++ + E A ++ E DL+P+F L D VR +PE + Sbjct: 880 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 939 Query: 435 QHVM 446 + ++ Sbjct: 940 EMIL 943 >Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein F16A11.3a protein. Length = 1490 Score = 29.5 bits (63), Expect = 2.1 Identities = 14/64 (21%), Positives = 28/64 (43%) Frame = +3 Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434 R++ ++ + E A ++ E DL+P+F L D VR +PE + Sbjct: 1006 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 1065 Query: 435 QHVM 446 + ++ Sbjct: 1066 EMIL 1069 >Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical protein R11A8.4 protein. Length = 607 Score = 28.7 bits (61), Expect = 3.7 Identities = 15/25 (60%), Positives = 16/25 (64%) Frame = -3 Query: 98 TKCSSSACGLWCSATARSEATALSR 24 T C SS CG CS+ A SEA LSR Sbjct: 530 THCESS-CGSSCSSNADSEANQLSR 553 >Z47356-4|CAA87417.1| 431|Caenorhabditis elegans Hypothetical protein T15H9.4 protein. Length = 431 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +1 Query: 10 EETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAGGDW 132 E+ ++ +A AS ++ + P+A HF+P+V + W Sbjct: 33 EDKIISIRATASSASITKESVPEAPPTHFIPVVVTVEPDAW 73 >AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. Length = 1120 Score = 28.3 bits (60), Expect = 4.9 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -1 Query: 256 RPSEYHLDRGSGNADEVLPSQVPRHVGSIH*IVHKQMFLK*TSLLQQ 116 R S+Y DRG N L SQV I ++ + + LK LQQ Sbjct: 1055 RTSDYWRDRGENNYRSQLESQVESQAREIERLMRENIELKSKRCLQQ 1101 >Z19154-8|CAE17741.1| 335|Caenorhabditis elegans Hypothetical protein C40H1.9 protein. Length = 335 Score = 27.9 bits (59), Expect = 6.5 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -2 Query: 348 PKSQIWE*DRS*HIQSPQLSQTLQVCRQQRGDHRSIILTEGAEM 217 P+++IW + +L+ T Q+C + GD+ S +TEG M Sbjct: 269 PRTEIW------YNNYMRLNDTYQICEEADGDYCSDAVTEGLNM 306 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,010,868 Number of Sequences: 27780 Number of extensions: 298037 Number of successful extensions: 1039 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1038 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1427403330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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