Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30623
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23514-5|AAC46541.2|  590|Caenorhabditis elegans Phosphatase 2a ...   137   5e-33
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    31   0.53 
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z47356-4|CAA87417.1|  431|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.    28   4.9  
Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>U23514-5|AAC46541.2|  590|Caenorhabditis elegans Phosphatase 2a
           regulatory a subunitprotein 1 protein.
          Length = 590

 Score =  137 bits (332), Expect = 5e-33
 Identities = 64/100 (64%), Positives = 77/100 (77%)
 Frame = +1

Query: 1   AAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAGGDWFTSRTSACGLFSVCYP 180
           A VEETVVRDKAV SLR +A+ HS  +LEEHFVP+++RLA GDWFTSRTSACGLFSV YP
Sbjct: 99  ATVEETVVRDKAVESLRKIADKHSSASLEEHFVPMLRRLATGDWFTSRTSACGLFSVVYP 158

Query: 181 RVSAPVKAELRQHFRSLCQDDTPMVAALLPTNLESLRKLW 300
           RVS  +K+EL+  FR+LC+DDTPMV       L    K++
Sbjct: 159 RVSPAIKSELKSMFRTLCRDDTPMVRRAAAAKLGEFAKVF 198



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 35/84 (41%), Positives = 42/84 (50%)
 Frame = +3

Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
           RRAAA KLGEFAKV E   V   L      L  D+QDSVR                 + +
Sbjct: 184 RRAAAAKLGEFAKVFEKTAVIEGLHSSLTDLHVDEQDSVRLLTVESAIAFGTLLDKANKK 243

Query: 435 QHVMPTVRALSGDASWRVRYMVAD 506
           + + P +  L  D SWRVRYMVA+
Sbjct: 244 KLIEPILIELFDDKSWRVRYMVAE 267



 Score = 35.9 bits (79), Expect = 0.025
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +3

Query: 255 RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
           R    + L   ++ +  E +  +++PI   L EDD  +VR              TP  + 
Sbjct: 500 RMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLT 559

Query: 435 QHVMPTVRALSGDASWRVRY 494
             V P +  L  D+ + VRY
Sbjct: 560 SEVKPLLEKLGKDSDFDVRY 579


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 459 HVQLASHAAPYPQESIEPQQPRRLRQPADERNLDHP 352
           H Q   + + YPQ+  +PQ P + +QPA      HP
Sbjct: 509 HAQHQQNMSGYPQQQQQPQHPHQHQQPASVPMQHHP 544


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/64 (21%), Positives = 28/64 (43%)
 Frame = +3

Query: 255  RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
            R++ ++ + E A ++  E    DL+P+F  L  D    VR              +PE  +
Sbjct: 880  RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 939

Query: 435  QHVM 446
            + ++
Sbjct: 940  EMIL 943


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/64 (21%), Positives = 28/64 (43%)
 Frame = +3

Query: 255  RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
            R++ ++ + E A ++  E    DL+P+F  L  D    VR              +PE  +
Sbjct: 1006 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 1065

Query: 435  QHVM 446
            + ++
Sbjct: 1066 EMIL 1069


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/64 (21%), Positives = 28/64 (43%)
 Frame = +3

Query: 255  RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
            R++ ++ + E A ++  E    DL+P+F  L  D    VR              +PE  +
Sbjct: 880  RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 939

Query: 435  QHVM 446
            + ++
Sbjct: 940  EMIL 943


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/64 (21%), Positives = 28/64 (43%)
 Frame = +3

Query: 255  RRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDME 434
            R++ ++ + E A ++  E    DL+P+F  L  D    VR              +PE  +
Sbjct: 1006 RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGILIHLYDFVKFLSPEKRD 1065

Query: 435  QHVM 446
            + ++
Sbjct: 1066 EMIL 1069


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -3

Query: 98  TKCSSSACGLWCSATARSEATALSR 24
           T C SS CG  CS+ A SEA  LSR
Sbjct: 530 THCESS-CGSSCSSNADSEANQLSR 553


>Z47356-4|CAA87417.1|  431|Caenorhabditis elegans Hypothetical
           protein T15H9.4 protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 10  EETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAGGDW 132
           E+ ++  +A AS  ++ +   P+A   HF+P+V  +    W
Sbjct: 33  EDKIISIRATASSASITKESVPEAPPTHFIPVVVTVEPDAW 73


>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
          Length = 1120

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -1

Query: 256  RPSEYHLDRGSGNADEVLPSQVPRHVGSIH*IVHKQMFLK*TSLLQQ 116
            R S+Y  DRG  N    L SQV      I  ++ + + LK    LQQ
Sbjct: 1055 RTSDYWRDRGENNYRSQLESQVESQAREIERLMRENIELKSKRCLQQ 1101


>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 348 PKSQIWE*DRS*HIQSPQLSQTLQVCRQQRGDHRSIILTEGAEM 217
           P+++IW      +    +L+ T Q+C +  GD+ S  +TEG  M
Sbjct: 269 PRTEIW------YNNYMRLNDTYQICEEADGDYCSDAVTEGLNM 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010,868
Number of Sequences: 27780
Number of extensions: 298037
Number of successful extensions: 1039
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)