Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30620X
         (288 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.16 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   1.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   1.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   1.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   2.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   2.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   2.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   3.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   4.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   6.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   8.0  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.0 bits (52), Expect = 0.16
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -1

Query: 201 ESLLVVAASDTKYIALPF-IA*LISLYFGAHALFVKDTKLVLVHHFEQ 61
           ++L VVA + TK   LPF +  +I + F  +  FV  T+++ V ++EQ
Sbjct: 97  QNLKVVATTKTKAWFLPFVVTNIIFVLFHTYEAFVW-TRIMGVAYYEQ 143


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 74  TTSNNFWHPVAGYETFNFMTAVNP 3
           +TSNN WH   G  + N     NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 19  MKLNVSYPATGCQKLFEVVDEHKLRI 96
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 19  MKLNVSYPATGCQKLFEVVDEHKLRI 96
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -3

Query: 187 RCRQR-HEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGT 35
           +CRQ+  +  + S  R T  P   +     K   A A   + T +GIP P T
Sbjct: 181 KCRQQLQQQQNKSASRTTTSPTKVKAS---KASPAAAPRSVATPTGIPTPST 229


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 178 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 50
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 178 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 50
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 178 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 50
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 178 QRHEVHSPSIHRLTDQPLL 122
           Q H  H P IH     P+L
Sbjct: 88  QLHSHHGPPIHHQIRPPIL 106


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -1

Query: 207 HRESLLVVAASDTKYIALPFIA*LISLYFGAHALFVKDTKLVLVHHFEQL 58
           H E   + +      IA  F+    SLYF     ++ D ++V+  +F  +
Sbjct: 231 HNEIQTIFSVPLLMKIASQFVGIFCSLYFCIFG-YIYDDEMVVPQNFHDI 279


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -1

Query: 207 HRESLLVVAASDTKYIALPFIA*LISLYFGAHALFVKDTKLVLVHHFEQL 58
           H E   + +      IA  F+    SLYF     ++ D ++V+  +F  +
Sbjct: 56  HNEIQTIFSVPLLMKIASQFVGIFCSLYFCIFG-YIYDDEMVVPQNFHDI 104


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +3

Query: 15  SHEVKRFVPG 44
           +HE+K+ +PG
Sbjct: 769 NHEIKKVIPG 778


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 74  WTSTSFVSFTKSAW 115
           WTS   +SF +  W
Sbjct: 294 WTSKEKISFLRGFW 307


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +3

Query: 12  RSHEVKRFVPGNGMPEVVRSGGRAQASYLLRKAH 113
           R H +      N  P V R  G++ A     K H
Sbjct: 235 RRHSINLLEEDNQKPNVCRICGKSYARPSTLKTH 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,805
Number of Sequences: 336
Number of extensions: 1172
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5003479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)