Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30620X
(288 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0207 - 15455163-15455389,15455623-15455895,15455991-154560... 113 3e-26
07_03_1309 + 25669394-25669399,25669520-25669584,25670543-256706... 110 2e-25
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201... 27 1.8
10_08_0204 + 15780718-15780783,15781674-15781731,15781982-157821... 27 3.2
07_03_0849 + 21997758-21998423 27 3.2
06_03_0395 - 20354713-20355570 27 3.2
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 26 4.2
07_03_0244 - 15715047-15715163,15716672-15716824,15718629-157187... 26 4.2
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 26 4.2
04_03_0498 + 16574250-16574312,16576576-16577457,16578624-165787... 26 4.2
03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961... 26 4.2
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 26 5.6
06_03_1216 - 28480222-28480275,28480362-28480394,28481271-28481345 26 5.6
05_04_0367 - 20672776-20673550,20674097-20674320,20674626-206748... 26 5.6
12_02_0844 - 23609783-23609926,23610014-23610331,23610771-236109... 25 7.4
10_06_0114 - 10911713-10911724,10913642-10913772,10913869-109142... 25 7.4
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 25 7.4
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245... 25 7.4
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230... 25 7.4
11_01_0404 + 3071412-3071464,3073572-3074970 25 9.8
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 25 9.8
05_03_0328 - 12468142-12468262,12468443-12468641,12468758-124689... 25 9.8
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414... 25 9.8
>03_03_0207 -
15455163-15455389,15455623-15455895,15455991-15456099,
15456186-15456243,15457002-15457066,15457190-15457195
Length = 245
Score = 113 bits (271), Expect = 3e-26
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK N++ P TGCQK E+ D+ KLR FY+KR+ EV D LG+E+KGYV ++ GG DKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSKAT 261
FPMKQGVLT+ RVRLL+ + T
Sbjct: 61 FPMKQGVLTSGRVRLLLHRGT 81
>07_03_1309 +
25669394-25669399,25669520-25669584,25670543-25670600,
25670683-25670791,25670872-25671144,25671348-25671589
Length = 250
Score = 110 bits (264), Expect = 2e-25
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV ++ GG DKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSKAT 261
FPMKQGVLT RVRLL+ + T
Sbjct: 61 FPMKQGVLTAGRVRLLLHRGT 81
>01_07_0254 +
42318181-42319471,42319581-42319792,42319909-42320132,
42320232-42321009
Length = 834
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 55 QKLF-EVVDEHKLRIFYEKRMGAEVEADQLG 144
+KL+ E+ DE KLRI YEK+ D+ G
Sbjct: 494 KKLYQEIKDEEKLRILYEKKYRRLKSLDERG 524
>10_08_0204 +
15780718-15780783,15781674-15781731,15781982-15782142,
15782221-15782982
Length = 348
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +1
Query: 76 DEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 255
D+ LR +K M + A + +E+ G R++ + ++ VLT S +++
Sbjct: 261 DDDSLREDMKKYMDVQAAASKRHEEFLGTQHRISDAKVEVARLRREAVLTESYQKMMSMD 320
Query: 256 ATHVTDRAAIE 288
+ +TD E
Sbjct: 321 TSQMTDEMKAE 331
>07_03_0849 + 21997758-21998423
Length = 221
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 265 HEWPLTSEDEHGCLSGRPVSSGILACRCRQ 176
H+WP ++ D+ + V G LA C++
Sbjct: 192 HDWPSSATDQETTTKRKVVKEGFLARNCKK 221
>06_03_0395 - 20354713-20355570
Length = 285
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 238 EHGCLSGRPVSSGI-LACRCRQRHEVHSPSIHR 143
EH S P S L RC++RH +HS HR
Sbjct: 37 EHSATSPSPSSPRTRLFPRCQRRHRLHSHGRHR 69
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 103 RKRYEACARPPLRTTSGIPLPGTKRL 26
R R RPP R++S +PLP R+
Sbjct: 251 RPRLSRRPRPPRRSSSPVPLPSPHRI 276
>07_03_0244 -
15715047-15715163,15716672-15716824,15718629-15718748,
15718830-15719045,15719902-15719968,15720051-15720125,
15720607-15720698,15721053-15721154,15721642-15721711,
15721788-15721846,15721947-15722031,15722443-15722520,
15722627-15722725,15722819-15722910,15725572-15725661,
15725937-15725995,15727966-15728281,15728627-15728702,
15729998-15730308,15730577-15730634,15731082-15731092,
15731247-15731397,15733372-15733778
Length = 967
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 181 GNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRA 279
GND++ P K+ VLT + ++++ HV+ R+
Sbjct: 405 GNDEKKDPSKKAVLTAMQQAAVLAECLHVSRRS 437
>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 160 YVLRVAGGNDKQGFPMKQGVLT-NSRVRLLMSKATHVTDR 276
Y R KQ F M +G+L +SRVRLL ++ V DR
Sbjct: 1256 YWARFCNMTCKQQFGMWKGILLPSSRVRLLSNEDGSVADR 1295
>04_03_0498 +
16574250-16574312,16576576-16577457,16578624-16578714,
16578802-16578857,16579527-16579640
Length = 401
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 180 RQRQARIPDET-GRPDKQPCSSSDVKG 257
R A + DET DK PC+S DV+G
Sbjct: 252 RTPNASVHDETVPNEDKTPCTSLDVRG 278
>03_02_0969 -
12795413-12795475,12795672-12795744,12796011-12796114,
12796374-12796493,12796591-12796683,12797813-12797911,
12798074-12798167,12798254-12798333,12798817-12799347
Length = 418
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -3
Query: 256 PLTSEDE---HGCLSGRPVSSGILA 191
PLT+E+E H CL GR S+ ILA
Sbjct: 185 PLTAEEENEVHNCLFGRGSSTEILA 209
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 73 VDEHKLRIFYEKRMGAEVEADQLGDEWKGYVL 168
++ + +RIF + + E + D + EW GY+L
Sbjct: 139 IEYYYIRIFENQDVEIEEKVDVIISEWMGYML 170
>06_03_1216 - 28480222-28480275,28480362-28480394,28481271-28481345
Length = 53
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +3
Query: 162 CTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHSCY 269
C SC W + R + Q CSS+ + S Y
Sbjct: 14 CASCAWGSVEMRFSPDGSTSAMQTCSSNCIPSSSKY 49
>05_04_0367 -
20672776-20673550,20674097-20674320,20674626-20674843,
20675133-20676534
Length = 872
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 67 EVVDEHKLRIFYEKRMGAEVEADQLGDE 150
E+++E KLRI Y+K+ E D G E
Sbjct: 538 EIMEEEKLRITYDKQWKRLKELDDNGAE 565
>12_02_0844 -
23609783-23609926,23610014-23610331,23610771-23610926,
23611068-23611318,23611384-23611530,23612450-23612501,
23612628-23612763,23613507-23613538
Length = 411
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 82 HKL-RIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKA 258
HKL + Y +M +EVE D +W+ Y ++ G K PM++ + T ++ A
Sbjct: 190 HKLYKRAYHPKMISEVELD---GKWRQYKSKLKRGYYKPNLPMERVLQTVPKIVAKSQWA 246
Query: 259 THVT 270
T V+
Sbjct: 247 TLVS 250
>10_06_0114 -
10911713-10911724,10913642-10913772,10913869-10914229,
10914339-10915081,10918916-10918964,10919063-10919334,
10919426-10919519,10919618-10920000,10920504-10920575,
10920656-10920778,10920875-10921048,10921115-10921579,
10921662-10921839
Length = 1018
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 169 EVHSPSIHRLTDQPLLRRPCAFRKRYEAC 83
+V P +HRL + +L RPC AC
Sbjct: 624 KVKYPELHRLVIKHMLHRPCGALNMNCAC 652
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 38 TRQRDARSCSKWWTSTSFVSFTKSAWAPK*RLI 136
TR ++A + +W+ TSFV W+ +L+
Sbjct: 94 TRMQEAPNHKDYWSMTSFVKLVGRPWSVVTKLV 126
>08_01_0002 -
20208-20594,21525-21671,21754-21917,22005-22162,
24533-24826,24916-25121,25216-25812,26366-27097
Length = 894
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 186 RQARIPDETGRPDKQPCS 239
R R+P E GRP + PC+
Sbjct: 31 RICRVPAEAGRPLRHPCA 48
>03_02_0752 -
10922456-10922644,10922719-10922796,10922888-10923016,
10923105-10923152,10923243-10923333,10923517-10923648,
10923869-10924086,10925121-10925271,10925360-10926009,
10926715-10926786,10926938-10926985,10927105-10927242,
10927750-10927756,10928064-10928212
Length = 699
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 108 LFVKDTKLVLVHHFEQLLASRCRVRNV*LHDCGKS 4
LF+ T V + F+ L RC V + LH C ++
Sbjct: 76 LFLDKTMDVALDSFDNLFCRRCLVFDCRLHGCSQN 110
>11_01_0404 + 3071412-3071464,3073572-3074970
Length = 483
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +1
Query: 67 EVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLL 246
++ H + K G++ E + ++ A G DK+G P + T+S V+LL
Sbjct: 119 KIAHHHHHHRHHSKNHGSDEEEHDMNED-------AADGKDKKGSPWHRMKWTDSMVKLL 171
Query: 247 MSKATH 264
++ ++
Sbjct: 172 ITAVSY 177
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 129 LYFGAHALFVKDTKLVLVHH-FEQLLASRCRVRN 31
LYF A F+ DTK V H F +L R V+N
Sbjct: 27 LYFRRDAKFLLDTKQVSRRHTFRELADGRHSVKN 60
>05_03_0328 -
12468142-12468262,12468443-12468641,12468758-12468974,
12469896-12469994,12470843-12470899,12470943-12472577
Length = 775
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 94 IFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 234
I E+ +GA A Q+ + W + AG N F ++ G + +R
Sbjct: 182 IHMEELLGAVANARQVFERWMAWRPDTAGWNSYIKFELRYGEVERAR 228
>04_04_0285 - 24136865-24137000,24137554-24137611,24138142-24141480,
24141789-24142218,24142861-24142928,24143015-24143165
Length = 1393
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 150 MEGLCTSCRWRQRQARIPDETGRPDKQP 233
+ G C+ + +Q+QA D+T PD QP
Sbjct: 1362 LRGSCSYKKAKQKQAVQLDDTEVPDSQP 1389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,457,478
Number of Sequences: 37544
Number of extensions: 166284
Number of successful extensions: 595
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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