Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30619X
(560 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 153 8e-38
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 153 8e-38
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 153 8e-38
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 150 7e-37
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 150 7e-37
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 150 7e-37
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 149 9e-37
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 149 9e-37
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 149 9e-37
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 149 9e-37
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 149 9e-37
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 149 9e-37
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 149 9e-37
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 149 9e-37
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 149 9e-37
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 149 9e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 149 9e-37
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 149 9e-37
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 149 9e-37
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 149 9e-37
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 148 2e-36
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 148 3e-36
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 138 2e-33
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 114 4e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 4e-20
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 68 5e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 7e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 6e-11
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 1e-08
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 55 3e-08
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 55 3e-08
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 55 4e-08
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 53 2e-07
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 51 5e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 6e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 8e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 8e-07
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 8e-07
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 50 1e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 50 1e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 50 1e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 50 1e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 50 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 49 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 6e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 7e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 1e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 45 3e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 5e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 7e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 2e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 3e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 40 0.001
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.008
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.008
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.043
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.057
At1g11970.1 68414.m01383 hypothetical protein 33 0.099
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.17
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 32 0.23
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.40
At5g58020.1 68418.m07260 expressed protein contains PF04641: Pro... 30 0.92
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.2
At5g12280.1 68418.m01444 hypothetical protein 29 1.6
At3g52110.1 68416.m05719 expressed protein 29 1.6
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.1
At1g47680.1 68414.m05297 hypothetical protein 29 2.1
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 29 2.8
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 28 3.7
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 28 3.7
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.9
At1g64900.1 68414.m07357 cytochrome P450, putative similar to cy... 27 6.5
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 8.6
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 153 bits (371), Expect = 8e-38
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGGAK 254
IQKESTLHLVLRLRGGAK
Sbjct: 61 IQKESTLHLVLRLRGGAK 78
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = +2
Query: 254 ERKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 433
+RKKK Y+ P LAVL+FYK+D +GK+ RLR+EC CGAG FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDR 138
Query: 434 HYCGKCHSTMVFKDD 478
HYCGKC T V++ +
Sbjct: 139 HYCGKCGLTYVYQKE 153
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 153 bits (371), Expect = 8e-38
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGGAK 254
IQKESTLHLVLRLRGGAK
Sbjct: 61 IQKESTLHLVLRLRGGAK 78
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +2
Query: 254 ERKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 433
+RKKK Y+ P LAVL+FYKVD +GK+ RLR+EC CGAG FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDR 138
Query: 434 HYCGKCHSTMVFKDD 478
HYCGKC T V++ +
Sbjct: 139 HYCGKCGLTYVYQKE 153
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 153 bits (371), Expect = 8e-38
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGGAK 254
IQKESTLHLVLRLRGGAK
Sbjct: 61 IQKESTLHLVLRLRGGAK 78
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +2
Query: 254 ERKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 433
+RKKK Y+ P LAVL+FYKVD +GK+ RL++EC CG G FMA DR
Sbjct: 79 KRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDR 138
Query: 434 HYCGKCHSTMVFKDDDK 484
HYCGKC +T VFK D+
Sbjct: 139 HYCGKCGTTYVFKKADE 155
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 150 bits (363), Expect = 7e-37
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 201 IQKESTLHLVLRLRGGA 251
IQKESTLHLVLRLRGG+
Sbjct: 365 IQKESTLHLVLRLRGGS 381
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 150 bits (363), Expect = 7e-37
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGGA 251
IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 150 bits (363), Expect = 7e-37
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGGA 251
IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 122
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 100 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRTQ 261
K K + K L + S LESS +MDV TT SRR+ TW FVV +++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKSR 308
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 122
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 100 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRTQ 261
K K + K L + S LESS +MDV TT SRR+ TW FVV +++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKSR 460
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 122
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 100 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRTQ 261
K K + K L + S LESS +MDV TT SRR+ TW FVV +++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKSR 384
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 122
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 100 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRTQ 261
K K + K L + S LESS +MDV TT SRR+ TW FVV +++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKSR 460
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 122
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 100 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRTQ 261
K K + K L + S LESS +MDV TT SRR+ TW FVV +++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKSR 384
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 3e-22
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +3
Query: 27 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 206
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 207 KESTLHLVLRLRGG 248
S LHLVL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 146 bits (354), Expect = 9e-36
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 142 bits (344), Expect = 1e-34
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 179
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 149 bits (362), Expect = 9e-37
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 104 bits (250), Expect = 4e-23
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 27 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 206
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 207 KESTLHLVLRLRGG 248
S LHLVL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 144 bits (348), Expect = 5e-35
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 201 IQKESTLHLVLRLRGGA 251
IQKESTLHLVLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGS 229
Score = 132 bits (319), Expect = 2e-31
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 201 IQKESTLHLVLRLRGG 248
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 148 bits (358), Expect = 3e-36
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 138 bits (333), Expect = 3e-33
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 132 bits (319), Expect = 2e-31
Identities = 67/77 (87%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDY 197
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 198 NIQKESTLHLVLRLRGG 248
NIQKESTLHLVLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 117 bits (281), Expect = 6e-27
Identities = 57/78 (73%), Positives = 66/78 (84%)
Frame = +3
Query: 15 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 194
+ MQI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 195 YNIQKESTLHLVLRLRGG 248
Y+IQK+S LHL LRLRGG
Sbjct: 61 YSIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 138 bits (335), Expect = 2e-33
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 129 bits (312), Expect = 1e-30
Identities = 63/76 (82%), Positives = 70/76 (92%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 201 IQKESTLHLVLRLRGG 248
IQKESTLHLVLRLRGG
Sbjct: 63 IQKESTLHLVLRLRGG 78
Score = 114 bits (275), Expect = 3e-26
Identities = 58/79 (73%), Positives = 66/79 (83%)
Frame = +3
Query: 6 VRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 185
++R MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG T
Sbjct: 547 LQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVT 606
Query: 186 LSDYNIQKESTLHLVLRLR 242
L DY+I K+STL+LVLRLR
Sbjct: 607 LGDYDIHKKSTLYLVLRLR 625
Score = 109 bits (261), Expect = 2e-24
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = +3
Query: 12 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 185
R MQIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 186 LSDYNIQKESTLHLVLRLR 242
L+DY+IQKESTLHLVL ++
Sbjct: 376 LADYSIQKESTLHLVLGMQ 394
Score = 105 bits (253), Expect = 2e-23
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
MQIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 201 IQKESTLHLVLRLRGG 248
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 98.7 bits (235), Expect = 2e-21
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Frame = +3
Query: 21 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 179
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 180 RTLSDYNIQKESTLHLVLRLRG 245
RTL+DY I+ STL L LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
Score = 97.5 bits (232), Expect = 5e-21
Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
Frame = +3
Query: 12 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 176
R M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294
Query: 177 GRTLSDYNIQKESTLHLVLRLRGG 248
GRTL+ YNIQK STL+LV R R G
Sbjct: 295 GRTLAHYNIQKGSTLYLVTRFRCG 318
Score = 93.5 bits (222), Expect = 9e-20
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Frame = +3
Query: 21 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 179
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 180 RTLSDYNIQKESTLHLVLRLRGG 248
RTL DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 114 bits (274), Expect = 4e-26
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +3
Query: 9 RRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL 188
R M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL
Sbjct: 82 RHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTL 141
Query: 189 SDYNIQKESTLHLVLRL 239
+DYNIQ +S LHL+ RL
Sbjct: 142 ADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 94.7 bits (225), Expect = 4e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 201 IQKESTLHLVLRLRGG 248
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 67.7 bits (158), Expect = 5e-12
Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK------------ 164
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 165 -QLEDGRTLSDYNIQKESTLHLVLRL 239
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 15 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 194
V M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 195 YNIQKESTL 221
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVK 101
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 67.3 bits (157), Expect = 7e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 201 IQKESTLHLVLR 236
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 6e-11
Identities = 30/76 (39%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +3
Query: 18 KMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 194
++QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 195 YNIQKESTLHLVLRLR 242
Y+I+++++L LV R++
Sbjct: 154 YSIEQDASLQLVARMQ 169
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSD 194
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 195 YNIQKESTLHLVL 233
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL-EDGRTLSDYNIQKES 215
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 216 TLHLVLRL 239
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 206
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 207 KESTLHLVLR 236
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL-EDGRTLSDYNIQKES 215
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 216 TLHLVLRL 239
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 206
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 207 KESTLHLVLR 236
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.8 bits (126), Expect = 4e-08
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 197
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 198 NIQKESTLHLVLRLRGG 248
Q ++T++LVL LRGG
Sbjct: 67 --QPDATVNLVLSLRGG 81
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +3
Query: 15 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 194
V + + V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 195 YNIQKESTLHLV 230
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +3
Query: 33 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 212
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 213 STLHLVLRLRGGAKNA 260
T+H+V RG A ++
Sbjct: 82 HTIHMV---RGSAPSS 94
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL-EDGRTLS 191
VK + +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + +
Sbjct: 32 VKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVK 91
Query: 192 DYNIQKESTLHLVLRL 239
DY + S LHLVL+L
Sbjct: 92 DYGVTGGSVLHLVLKL 107
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 27 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 200
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 201 IQKESTLHLVLR 236
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLS 191
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 192 DYNIQKESTLHLVLRLRGG 248
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M +++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 201 IQKESTLHL 227
I ES L L
Sbjct: 61 ILFESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 192 DYNIQKESTLHLVL 233
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 192 DYNIQKESTLHLVL 233
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 197
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 198 NIQKESTLHLVLRLRGG 248
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLS 191
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 192 DYNIQKESTLHLVLRLRGGAKNA 260
+ + +E L ++L A +A
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSA 83
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 192 DYNIQKESTLHLVL 233
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 192 DYNIQKESTLHLVL 233
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 192 DYNIQKESTLHLVL 233
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 201 IQKESTLHLVL 233
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M + + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 201 IQKESTL 221
I ES L
Sbjct: 61 ILFESLL 67
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDY 197
++I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 198 NIQKESTLHLV 230
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M++ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 201 IQKESTLHL 227
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 12 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 188
R M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 189 SDYNIQKESTLHLV 230
+ N+Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE-DGRTLSDYNIQKES 215
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 216 TLHLVLRL 239
LHLV+RL
Sbjct: 98 LLHLVIRL 105
Score = 40.3 bits (90), Expect = 9e-04
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +3
Query: 27 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 197
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 198 NIQKESTLHLVL 233
++ +HL++
Sbjct: 170 CQNGDNVIHLLI 181
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
M +F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 201 IQKESTLHLVLRLRGGAKN 257
I S + L + ++N
Sbjct: 61 ILNHSRIQLSISSPDQSRN 79
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDG 179
+++ M+I + L GK L V +++ ++KAK K + ++ + GK+LED
Sbjct: 494 AIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDE 553
Query: 180 RTLSDYNIQKESTLHLV 230
++L++ N+Q S +HL+
Sbjct: 554 KSLAEQNVQPNSLVHLL 570
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 48 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 227
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 228 V 230
+
Sbjct: 604 M 604
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 191
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 192 DYNIQKESTLHLVL 233
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
+++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 201 IQKESTLHL 227
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 78 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAK 254
S+ + ++K KI + IP N+Q+L L+D +L+ YN+ L L LR RGG K
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRK 784
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 200
+ + ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 201 IQKESTLHL 227
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 134
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVK 101
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 176
M +F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 161
M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 21 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 161
M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 63 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 176
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.057
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 18 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 185
+ ++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 12 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 131
R + ++ + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 33 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 176
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 32.3 bits (70), Expect = 0.23
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 78 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSDYNIQ------KEST 218
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 219 LHLVLRL 239
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.40
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 63 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 221
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At5g58020.1 68418.m07260 expressed protein contains PF04641:
Protein of unknown function, DUF602
Length = 354
Score = 30.3 bits (65), Expect = 0.92
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 15 VKMQIFVKTLT-GKTITLEVEPSD---TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR 182
++ QIFVK+ K + L+++P+ T+ + + ++ + I + + GK L
Sbjct: 3 IRRQIFVKSPDCQKVVALQLDPAQSLLTLSGITSLLESSQRISFSACSITLDGKLLNGST 62
Query: 183 TLSDYNIQKESTLHLVLRLRGG 248
+ + S L L RLRGG
Sbjct: 63 RIQVSKLPSVSMLTLFPRLRGG 84
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 230 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 111
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 51 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 203
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g52110.1 68416.m05719 expressed protein
Length = 362
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 205 RRNPPSTWC*G-----FVVALRTQEEELLHTQEDQAQEEEGQTS 321
R NPPS C + LRT+ E+L +ED+A+EE+ + S
Sbjct: 296 RTNPPSPQCFSENRTATLKPLRTKPTEVLKRKEDEAEEEKNRKS 339
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 209 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 111
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 72 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 227
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 78 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 236
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V R
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKR 100
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 502 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 377
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 502 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 377
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 206 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 111
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At1g64900.1 68414.m07357 cytochrome P450, putative similar to
cytochrome p450 GI:438240 from [Solanum melongena]
Length = 506
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 535 IIHSSRERSYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHRH 413
I+H SR RSY ++ ++FE R + ++HH H
Sbjct: 136 ILHPSRVRSYSHARHWVLEILFERFRNHGGEEPIVLIHHLH 176
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 118 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 222
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,111,320
Number of Sequences: 28952
Number of extensions: 252679
Number of successful extensions: 933
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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