Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30617X
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 54 4e-08
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 50 5e-07
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 50 5e-07
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 50 5e-07
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 50 5e-07
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 44 3e-05
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 31 0.23
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 29 1.2
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 29 1.2
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 2.1
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 2.1
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 5.0
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 27 5.0
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 5.0
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 27 5.0
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 6.5
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 27 6.5
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 27 6.5
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 6.5
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 26 8.7
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 54.0 bits (124), Expect = 4e-08
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 14 MAKSKNHTNHNQNRKAHRNGIKKP 85
MAKSKNHTNHNQN+KAHRNGI KP
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKP 24
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 798 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQK+STLHLV
Sbjct: 798 PDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +QL DGRTLSDYNIQKESTLHLV
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 20 KSKNHTNHNQNRKAHRNGIKKP 85
K +NHTNHN+N KAHRNGI KP
Sbjct: 14 KPENHTNHNRNNKAHRNGITKP 35
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 20 KSKNHTNHNQNRKAHRNGIKKP 85
KSKNHTNHNQN AHR GI KP
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKP 101
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.23
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IFG QL + R L YNI+ E +HLV
Sbjct: 198 PDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 131 DGRTLSDYNIQKESTLHL 184
D RT+SDYNI+ STL L
Sbjct: 136 DQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 286 RFYKVTRTGKIHRLRREC 339
++YK+ GKI RLR+EC
Sbjct: 98 KYYKIDENGKITRLRKEC 115
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 286 RFYKVTRTGKIHRLRREC 339
++YK+ GKI RLR+EC
Sbjct: 98 KYYKIDENGKITRLRKEC 115
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 89 PIRHESIFGMEQLVDGRTLSDYNIQKESTLHLV 187
P + IF +Q+ D +T +DY + S LHLV
Sbjct: 38 PPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 191 STPGGGWIPSGYCSPRGYVHLPAAPYQ 111
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 74 YHFCELCGFGYDLYDSL 24
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 386 GPHHRHEHSGADCSPVHSR 330
GPHH H H G P + R
Sbjct: 119 GPHHHHHHHGPPPPPYYGR 137
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 74 YHFCELCGFGYDLYDSL 24
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 386 GPHHRHEHSGADCSPVHSR 330
GPHH H H G P + R
Sbjct: 119 GPHHHHHHHGPPPPPYYGR 137
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KRIKMAKSKNHTNHNQNRKAHRNGIKKPLPIRHESI-FGMEQLVDGRTLSDYNIQKEST 175
+R+ S+ N N + NG KK L +++ + FGM G S I + +T
Sbjct: 681 RRVSSPSSEATRKKNSNEEDPENGAKKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNT 739
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KRIKMAKSKNHTNHNQNRKAHRNGIKKPLPIRHESI-FGMEQLVDGRTLSDYNIQKEST 175
+R+ S+ N N + NG KK L +++ + FGM G S I + +T
Sbjct: 54 RRVSSPSSEATRKKNSNEEDPENGAKKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNT 112
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KRIKMAKSKNHTNHNQNRKAHRNGIKKPLPIRHESI-FGMEQLVDGRTLSDYNIQKEST 175
+R+ S+ N N + NG KK L +++ + FGM G S I + +T
Sbjct: 622 RRVSSPSSEATRKKNSNEEDPENGAKKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNT 680
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KRIKMAKSKNHTNHNQNRKAHRNGIKKPLPIRHESI-FGMEQLVDGRTLSDYNIQKEST 175
+R+ S+ N N + NG KK L +++ + FGM G S I + +T
Sbjct: 681 RRVSSPSSEATRKKNSNEEDPENGAKKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNT 739
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 110 FGMEQLVDGRTLSDYNIQKESTL 178
F ++L D ++ DYNIQK ST+
Sbjct: 197 FSGKRLEDHCSIGDYNIQKSSTI 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,687,244
Number of Sequences: 27780
Number of extensions: 160662
Number of successful extensions: 656
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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