Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30613
(576 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 144 1e-34
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 144 1e-34
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 144 1e-34
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 144 1e-34
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 144 1e-34
AY058274-1|AAL13503.1| 357|Drosophila melanogaster GH02816p pro... 29 6.0
AE014296-416|AAF47616.2| 357|Drosophila melanogaster CG5707-PA ... 29 6.0
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 28 7.9
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 28 7.9
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 144 bits (348), Expect = 1e-34
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3
Query: 243 FPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
F +LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 174 FLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 144 bits (348), Expect = 1e-34
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3
Query: 243 FPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
F +LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 174 FLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 144 bits (348), Expect = 1e-34
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3
Query: 243 FPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
F +LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 174 FLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 144 bits (348), Expect = 1e-34
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3
Query: 243 FPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
F +LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 174 FLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 144 bits (348), Expect = 1e-34
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = +3
Query: 243 FPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
F +LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 174 FLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AY058274-1|AAL13503.1| 357|Drosophila melanogaster GH02816p
protein.
Length = 357
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 228 H*AGPFPASLCRKM-GVPYCIVKG 296
H + PF A L R + VPYC++KG
Sbjct: 237 HTSPPFAAELARTIKNVPYCVIKG 260
>AE014296-416|AAF47616.2| 357|Drosophila melanogaster CG5707-PA
protein.
Length = 357
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 228 H*AGPFPASLCRKM-GVPYCIVKG 296
H + PF A L R + VPYC++KG
Sbjct: 237 HTSPPFAAELARTIKNVPYCVIKG 260
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 407
LC VPY V+ K LG V R C TN S ++ + + + I+
Sbjct: 71 LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 407
LC VPY V+ K LG V R C TN S ++ + + + I+
Sbjct: 71 LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,799,845
Number of Sequences: 53049
Number of extensions: 403108
Number of successful extensions: 1431
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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