BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30612 (725 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 37 0.085 BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 37 0.085 AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 37 0.085 >X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue specific mRNA. ). Length = 151 Score = 36.7 bits (81), Expect = 0.085 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +2 Query: 347 GTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDTFPILSIYPSIQAEVTWALKAEDK 508 G V I D KSG CP++ Y Y + P+ S YPSI+ V W L+ +DK Sbjct: 80 GVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQ-DDK 134 >BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type C2 protein. Length = 151 Score = 36.7 bits (81), Expect = 0.085 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +2 Query: 347 GTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDTFPILSIYPSIQAEVTWALKAEDK 508 G V I D KSG CP++ Y Y + P+ S YPSI+ V W L+ +DK Sbjct: 80 GVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQ-DDK 134 >AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type C2 precursor variant protein. Length = 151 Score = 36.7 bits (81), Expect = 0.085 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +2 Query: 347 GTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDTFPILSIYPSIQAEVTWALKAEDK 508 G V I D KSG CP++ Y Y + P+ S YPSI+ V W L+ +DK Sbjct: 80 GVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQ-DDK 134 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 88,588,359 Number of Sequences: 237096 Number of extensions: 1749592 Number of successful extensions: 2582 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2582 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8567175942 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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