Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30611
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein pr...    31   1.7  
AK023435-1|BAB14573.1|  462|Homo sapiens protein ( Homo sapiens ...    31   1.7  
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.       29   6.9  
BC044627-1|AAH44627.1|  682|Homo sapiens SCRIB protein protein.        29   6.9  
BC014632-1|AAH14632.2|  832|Homo sapiens SCRIB protein protein.        29   6.9  
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.             29   6.9  
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.    29   6.9  
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.                29   6.9  

>BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein
           protein.
          Length = 1122

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 136 LNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEINN 258
           L+ +K  F S++K H + Y  D   E     F+K+L +I N
Sbjct: 847 LHNSKSFFRSYIKNHIKRYCSDNGGEKMKTFFEKSLIDIKN 887


>AK023435-1|BAB14573.1|  462|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13373 fis, clone PLACE1000749. ).
          Length = 462

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 136 LNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEINN 258
           L+ +K  F S++K H + Y  D   E     F+K+L +I N
Sbjct: 187 LHNSKSFFRSYIKNHIKRYCSDNGGEKMKTFFEKSLIDIKN 227


>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
          Length = 1630

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847


>BC044627-1|AAH44627.1|  682|Homo sapiens SCRIB protein protein.
          Length = 682

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 97  RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 143


>BC014632-1|AAH14632.2|  832|Homo sapiens SCRIB protein protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 3   RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 49


>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
          Length = 1630

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847


>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
          Length = 1601

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 772 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 818


>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
          Length = 1630

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 210 RAALSIIQEKLGRDKQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLP 353
           R A + +Q ++ R++ +  +N  T   +    DY+P E++   GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,282,056
Number of Sequences: 237096
Number of extensions: 1096983
Number of successful extensions: 2360
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)