Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30610
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 146 1e-35
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 145 2e-35
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 144 4e-35
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 54 7e-08
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 54 9e-08
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 53 2e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 52 3e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 1e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 2e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 50 2e-06
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 49 4e-06
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 49 4e-06
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 49 4e-06
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 49 4e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 48 8e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 48 8e-06
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 48 8e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 1e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 47 1e-05
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 47 1e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 46 3e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 46 3e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 46 3e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 46 3e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 46 3e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 46 3e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 46 3e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 45 4e-05
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 45 4e-05
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 45 4e-05
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 45 4e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 6e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 44 8e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 44 1e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 44 1e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 44 1e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 44 1e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 1e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 1e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 43 2e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 43 2e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 43 2e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 43 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 43 2e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 43 2e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 43 2e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 43 2e-04
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 42 3e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 4e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 42 4e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 42 4e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 42 4e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 42 4e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 42 5e-04
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 41 7e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 41 7e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 41 7e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 41 7e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 41 7e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 41 7e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 41 0.001
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 40 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.002
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.002
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 40 0.002
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 40 0.002
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 40 0.002
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 40 0.002
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 40 0.002
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 39 0.003
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.003
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.003
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 39 0.003
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 39 0.003
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 39 0.003
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 39 0.004
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 39 0.004
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 39 0.004
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 39 0.004
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 38 0.005
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.005
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 38 0.005
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 38 0.007
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 38 0.007
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 38 0.007
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 38 0.009
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 37 0.012
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 37 0.012
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 37 0.012
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 37 0.012
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.012
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 37 0.015
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 36 0.020
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 36 0.020
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 36 0.020
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.020
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 36 0.020
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 36 0.020
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.027
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 36 0.027
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.027
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 36 0.027
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.035
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.035
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.035
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.035
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 35 0.047
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 35 0.047
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 35 0.047
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 35 0.047
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.047
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.047
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 35 0.062
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 35 0.062
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 34 0.082
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 34 0.082
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.082
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.082
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.082
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 34 0.082
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 34 0.11
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.11
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.11
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.11
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 33 0.14
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 33 0.14
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.14
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 33 0.19
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.19
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.19
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 33 0.19
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.19
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.19
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.19
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.25
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 33 0.25
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.25
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.25
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.25
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.25
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 32 0.33
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 32 0.33
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.33
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.33
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.33
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 32 0.33
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.33
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 32 0.33
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 32 0.33
At4g39753.1 68417.m05629 kelch repeat-containing F-box family pr... 32 0.44
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.44
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.58
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 31 0.58
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.58
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 31 0.58
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 31 0.58
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.76
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.76
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 31 0.76
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 31 0.76
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 31 1.0
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 31 1.0
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 31 1.0
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 1.0
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 30 1.3
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.3
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.3
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 30 1.3
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 1.8
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 1.8
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 30 1.8
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 30 1.8
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 30 1.8
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.3
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 2.3
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 29 2.3
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 29 2.3
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 2.3
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 29 2.3
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 3.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 3.1
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 29 3.1
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 3.1
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 3.1
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 4.1
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 4.1
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 4.1
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.1
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 4.1
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 5.4
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 5.4
At5g08250.1 68418.m00969 cytochrome P450 family protein contains... 28 5.4
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 28 5.4
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 5.4
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 5.4
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 5.4
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 28 7.1
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 7.1
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 7.1
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 7.1
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 7.1
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 7.1
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 27 9.4
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 27 9.4
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 9.4
At1g71310.3 68414.m08231 expressed protein 27 9.4
At1g71310.2 68414.m08230 expressed protein 27 9.4
At1g71310.1 68414.m08229 expressed protein 27 9.4
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 27 9.4
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 146 bits (354), Expect = 1e-35
Identities = 66/88 (75%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
DGH +WVSCVRFSPN P IVS WD+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Score = 109 bits (261), Expect = 2e-24
Identities = 48/82 (58%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL GH
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWD 84
Score = 104 bits (249), Expect = 7e-23
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 173 KTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 686 HNDIITALCF 715
II +LCF
Sbjct: 233 AGSIIHSLCF 242
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 202 SPDGSLCASGGKD 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 255 RLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNTLAECKYTIQ 422
+LW+ L K T + H + V V FS + IVS S DKT+K+WN L CK
Sbjct: 130 KLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-LQNCKLRNS 188
Query: 423 DDGHSDWVSCVRFSPN 470
GHS +++ V SP+
Sbjct: 189 LVGHSGYLNTVAVSPD 204
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D + G RR H+ V V S D + +SGS D ++LW+ LA + T + GH+
Sbjct: 49 DKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD-LATGETTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSTD--NRQIVSASRDR 127
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
GHS ++ V +S DG SG D + LWDL G+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGE 96
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 34.3 bits (75), Expect = 0.082
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ +V + + LS S D L +W L E +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S+D +S S D+T
Sbjct: 113 FSTDNRQIVSASRDRT 128
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG--NYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 497 WLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
W G+ +++W L + +GH+ + +V S D S +D LW+ G+ +
Sbjct: 83 WDGE-LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKY 140
Query: 677 TLDHND 694
T+ D
Sbjct: 141 TISEGD 146
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 145 bits (352), Expect = 2e-35
Identities = 66/89 (74%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 426 -DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
+GH DWVSCVRFSPN P IVS WD+
Sbjct: 146 GEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Score = 112 bits (269), Expect = 3e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL GH
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWD 84
Score = 103 bits (247), Expect = 1e-22
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 174 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Query: 686 HNDIITALCF 715
N +I ALCF
Sbjct: 234 ANSVIHALCF 243
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
E H V V FS + Q IVS S DKT+K+WN L+ CK GH+ +VS V SP+
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-----RSTLAGHTGYVSTVAV 202
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 203 SPDGSLCASGGKD 215
Score = 37.5 bits (83), Expect = 0.009
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D A G RR H+ V V S D + +SGS D ++LW+ LA T + GH+
Sbjct: 49 DKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD-LAAGVSTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSLD--NRQIVSASRDR 127
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W+L+ K HT V +VA S D SG +D + LW+ LAE K + +
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEGKKLYSLEAN 235
Query: 435 SDWVSCVRFSPN 470
S + + FSPN
Sbjct: 236 S-VIHALCFSPN 246
Score = 35.5 bits (78), Expect = 0.035
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GHS ++ V +S DG SG D + LWDL G
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG 95
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ +V + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S D +S S D+T
Sbjct: 113 FSLDNRQIVSASRDRT 128
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD--GNYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKT 175
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 144 bits (350), Expect = 4e-35
Identities = 65/88 (73%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEA 145
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
DGH +WVSCVRFSPN P IVS WD+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Score = 108 bits (259), Expect = 4e-24
Identities = 47/82 (57%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+ GH
Sbjct: 3 EGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWD 84
Score = 103 bits (246), Expect = 2e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 173 KTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 686 HNDIITALCF 715
II +LCF
Sbjct: 233 AGSIIHSLCF 242
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 202 SPDGSLCASGGKD 214
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 255 RLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNTLAECKYTIQ 422
+LW+ L K T + H + V V FS + IVS S DKT+K+WN L CK
Sbjct: 130 KLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-LQNCKLRNT 188
Query: 423 DDGHSDWVSCVRFSPN 470
GHS +++ V SP+
Sbjct: 189 LAGHSGYLNTVAVSPD 204
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D + G RR H+ V V S D + +SGS D ++LW+ LA + T + GH+
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD-LATGESTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSTD--NRQIVSASRDR 127
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 35.9 bits (79), Expect = 0.027
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
GHS ++ V +S DG SG D + LWDL G+
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGE 96
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG--NYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Score = 31.5 bits (68), Expect = 0.58
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
+ GH+ +V + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S+D +S S D+T
Sbjct: 113 FSTDNRQIVSASRDRT 128
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 54.4 bits (125), Expect = 7e-08
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DG 431
RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K QD G
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTKKLKQDLPG 442
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+D V V +SP+ +VS G DR+
Sbjct: 443 HADEVFAVDWSPDGEK--VVSGGKDRV 467
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP+
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSPD 162
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
RLWDL + H VL+VA+S D + +VSGS+ I WN GH
Sbjct: 134 RLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH 193
Query: 435 SDWVSCVRFSPNH 473
W++ + + P H
Sbjct: 194 KKWITGISWEPVH 206
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D R+WD+ K+ HT V V + D I +GS+D TIK+W T + K +
Sbjct: 222 DARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQGKLIRELK 279
Query: 429 GHSDWVSCVRFSPNH 473
GH W++ + S +
Sbjct: 280 GHGHWINSLALSTEY 294
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
T+K+W + KLK + GH+ + V SPDG SGGKD LW
Sbjct: 425 TLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 42.3 bits (95), Expect(2) = 2e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 76 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK+
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKS 383
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
++W++ K + H +V +V +S D ++VSG +D+ +KLW
Sbjct: 427 KIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 208 SSDGNYALSGSWDK 249
S DG +SG D+
Sbjct: 453 SPDGEKVVSGGKDR 466
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
TV++W L GH ++ TV SPDG SG K + W+ G+
Sbjct: 132 TVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
GH+ + V+ SPDG ASG D LWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
++V++W+ + GH G + V+ S D L SG KD +W++ K L
Sbjct: 382 KSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 683 DHNDIITAL 709
H D + A+
Sbjct: 442 GHADEVFAV 450
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 202 VLSSDGNYALSGSWDKTFVC 261
S DG + +SGS C
Sbjct: 158 AWSPDGKHLVSGSKSGEICC 177
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKT 252
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHT 304
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 340 TMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 23.4 bits (48), Expect(2) = 2e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKY 75
KL L+GH W+ +A + +Y
Sbjct: 273 KLIRELKGHGHWINSLALSTEY 294
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD G RF++H V V F VSG D IK+WN C +T+ G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL--G 91
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H D++ V+F +H NP IVS D+ R
Sbjct: 92 HLDYIRTVQF--HHENPWIVSASDDQTIR 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 GQDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G D+++ W+ + H + +V F +N IVS S D+TI++WN + +
Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS 129
Query: 417 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ GH+ +V C F P ++VS D+ R
Sbjct: 130 VL-TGHNHYVMCASFHPK--EDLVVSASLDQTVR 160
Score = 34.3 bits (75), Expect = 0.082
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 205 LSSDG--NYALSG 237
D Y L G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 30.7 bits (66), Expect = 1.0
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPN 470
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF--- 256
Query: 471 HA-NPIIVSCG-------WDRLSRSGI 527
HA IIVS WD R+GI
Sbjct: 257 HAKQDIIVSNSEDKSIRVWDATKRTGI 283
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+KVW+ + LGH Y+ TV + S D +W+ + L H
Sbjct: 75 IKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
Query: 689 NDIITALCF 715
N + F
Sbjct: 135 NHYVMCASF 143
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
QT+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
Q R+W+ + H V+ +F +VS S D+T+++W+
Sbjct: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD+ G + HT V F+ + IVSGS D+T+++W+ T +C +
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL--PA 153
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
HSD V+ V F N +IVS +D L R
Sbjct: 154 HSDPVTAVDF--NRDGSLIVSSSYDGLCR 180
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD+ GK + H+ V +V F+ D IVS S D ++W++ C T+ DD
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Query: 432 HSDWVSCVRFSPN 470
+ VS VRFSPN
Sbjct: 198 NPP-VSFVRFSPN 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFS 464
+ F H + VAFS D R IVS S DKT+KLW+ E I+ GH+++ CV F+
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD--VETGSLIKTLIGHTNYAFCVNFN 122
Query: 465 PNHANPIIVSCGWDRLSR 518
P + +IVS +D R
Sbjct: 123 PQ--SNMIVSGSFDETVR 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+T+K+W + L +GH+ Y V +P ++ SG D +WD+ GK L L
Sbjct: 93 KTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 686 -HNDIITALCF 715
H+D +TA+ F
Sbjct: 153 AHSDPVTAVDF 163
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 202 VLSSDGNYALSGSWDKT 252
SSD + +S S DKT
Sbjct: 78 AFSSDARFIVSASDDKT 94
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
+W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 269 MWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKD--VLSVAFSVDN-RQIVSGSRDKTIKLWNTLAECK 410
L RLW++++ K + + H +S AFSV N ++IVSGS D + +W L K
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE-LNSKK 276
Query: 411 YTIQDDGHSDWVSCVRFSP 467
+ +GH++ V V P
Sbjct: 277 LLQKLEGHTETVMNVACHP 295
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
ET L TL GH + + NP+ +MI+S S D+T+ +W +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
S ++ V + DG+ +S S+D
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYD 176
Score = 35.5 bits (78), Expect = 0.035
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+TV++W +T K HS + V + DGSL S D +WD G + TL
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 683 -DHNDIITALCF 715
D N ++ + F
Sbjct: 195 DDENPPVSFVRF 206
Score = 35.1 bits (77), Expect = 0.047
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 211 SDGNYALSGSWDKT 252
N +SGS+D+T
Sbjct: 123 PQSNMIVSGSFDET 136
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 670
L T+++W++++ K + GH + Y +++ +G SG +D +W+LN K
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 671 LHTLD-HNDII 700
L L+ H + +
Sbjct: 278 LQKLEGHTETV 288
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
I+S S D + +W+L N+ + QK L GH+ + +V N SGS DKT
Sbjct: 258 IVSGSEDNCVHMWEL----NSKKLLQK-LEGHTETVMNVACHPTENLIASGSLDKT 308
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
V +W L + KL GH+ + V P +L ASG D +W
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
GH ++ V S D S D LWD+ G + TL
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL 109
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
+ R+W++ GK R + H+ + SV F+ D IVS S D + K+W+ C T+
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 423 DDGHSDWVSCVRFSPN 470
DD S VS +FSPN
Sbjct: 210 DD-KSPAVSFAKFSPN 224
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECKYTIQDDG 431
LW R+E H+ + +A+S D+ S S D T+++W+ + EC ++ G
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR--G 126
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H+++V CV F+P + +IVS +D R
Sbjct: 127 HTNFVFCVNFNP--PSNLIVSGSFDETIR 153
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 202 VLSSDGNYALSGSWDKTFVCGISL-QARLPDDSRTILR 312
SSD +Y S S D C + + AR P + +LR
Sbjct: 92 AWSSDSHYTCSASDD----CTLRIWDARSPYECLKVLR 125
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDD 428
R+WD + + + HT V V F+ + IVSGS D+TI++W +C I+
Sbjct: 110 RIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK-- 167
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWD 506
HS +S V F N +IVS D
Sbjct: 168 AHSMPISSVHF--NRDGSLIVSASHD 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIKLWNTLAECK 410
L +L + A GK + + HT V + AFSV N + IVSGS D + LW+ A
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR-N 291
Query: 411 YTIQDDGHSDWVSCVRFSP 467
+ +GH+D V V P
Sbjct: 292 ILQRLEGHTDAVISVSCHP 310
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIKLW 389
LWDL A +R E HT V+SV+ V N SG+ DKTI++W
Sbjct: 284 LWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+T+++W + K HS +++V + DGSL S D +WD +G L TL
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S + +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWS 94
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 163 KRLYGHSHFISDVVLSSDGNYALSGSWDKTFV 258
K L GH+ IS V S+DGN S S DKT +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMI 68
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 461 LTQSCQPHY-CILWLGQTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDM 634
L S HY C T+++W + + L GH+ ++ V +P +L SG D
Sbjct: 91 LAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE 150
Query: 635 KAMLWDLNDGK 667
+W++ GK
Sbjct: 151 TIRIWEVKTGK 161
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCF 715
GH+ ++ V S DG+L AS D +LW + +H + H+ I+ L +
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
+T+ +W TN L + GHS ++ + S D S D +WD
Sbjct: 65 KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 211 SDGNYALSGSWDKT 252
N +SGS+D+T
Sbjct: 138 PPSNLIVSGSFDET 151
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P + N
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPVNKN 326
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L++ + +
Sbjct: 293 KTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWT 351
Query: 683 DHNDIITALCF 715
D D I+A+ +
Sbjct: 352 DVRDSISAISY 362
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 545 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH+G + + S D +L S KD LW + LH HN+ +T + F
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEF 320
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 205 LS--SDGNYALSGSWD-KTFVCGIS 270
+ + N+A SGS D K + G+S
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNP 563
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
RLW+L++ +T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 537 RLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
+LSSS DKT+ +W L+ +++ HS +++ + + D Y +SGS D
Sbjct: 527 LLSSSMDKTVRLWNLSSQ------TCLKVFSHSDYVTCIQFNPVDDRYFISGSLD 575
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD G RF++H V V F VSG D IK+WN C +T+ G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL--G 91
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H D++ V+F +H P IVS D+ R
Sbjct: 92 HLDYIRTVQF--HHEYPWIVSASDDQTIR 118
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 GQDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G D+++ W+ + H + +V F + IVS S D+TI++WN + +
Sbjct: 70 GDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVS 129
Query: 417 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ GH+ +V C F P ++VS D+ R
Sbjct: 130 VL-TGHNHYVMCASFHPK--EDLVVSASLDQTVR 160
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 31.1 bits (67), Expect = 0.76
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPN 470
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF--- 256
Query: 471 HA-NPIIVSCGWDRLSR 518
HA IIVS D+ R
Sbjct: 257 HAKQDIIVSNSEDKSIR 273
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+KVW+ N + LGH Y+ TV + S D +W+ + L H
Sbjct: 75 IKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Query: 689 NDIITALCF 715
N + F
Sbjct: 135 NHYVMCASF 143
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
Q R+W+ + H V+ +F +VS S D+T+++W+ A K T+
Sbjct: 115 QTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H +V SV F IVS S DK+I++W+
Sbjct: 247 HMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
QT+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 115 QTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ + A C + G
Sbjct: 524 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM--G 581
Query: 432 HSDWVSCVRFS 464
H+ V + +S
Sbjct: 582 HNSCVWSLSYS 592
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--G 431
+WDL+ + H V S+++S + + SGS D T+KLW+ + K T ++ G
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNG 626
Query: 432 HSDWVSCVRFSPNHANPI 485
+S+ + +R P + P+
Sbjct: 627 NSNRLRSLRTFPTKSTPV 644
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+TV++W + + +GH + ++ +SPDG ASG +D M+WDL+ + + L
Sbjct: 521 KTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM 580
Query: 683 DHNDIITALCF 715
HN + +L +
Sbjct: 581 GHNSCVWSLSY 591
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
T+ +W L+ + +GH+ + +++ S +GSL ASG D LWD+ L
Sbjct: 564 TIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 34.7 bits (76), Expect = 0.062
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 205 LSSDGNYALSGSWDKT 252
S G+Y S S D+T
Sbjct: 468 FSPFGHYFASCSHDRT 483
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+W + + R H DV + + I +GS DKT++LW+ EC G
Sbjct: 485 RIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIF--IG 539
Query: 432 HSDWVSCVRFSPN 470
H V + SP+
Sbjct: 540 HRSMVLSLAMSPD 552
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
LGHSG + + T SP G S D LW
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT- 679
+T ++W + + L+I +G+L+ V P+ + A+G D LWD+ G+ +
Sbjct: 482 RTARIWSMDRIQPLRIM----AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 680 LDHNDIITAL 709
+ H ++ +L
Sbjct: 538 IGHRSMVLSL 547
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 205 LSSDGNYALSGSWDKTFV 258
+S DG Y SG D T +
Sbjct: 549 MSPDGRYMASGDEDGTIM 566
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 243 TFHGHEGDVNTVKFFPD 259
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDST 228
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 468 NHANPIIVSCG 500
N + V+CG
Sbjct: 118 NGQS---VACG 125
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 686 -HND 694
H D
Sbjct: 288 PHGD 291
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 85 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 144
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 121 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 180
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 181 TFHGHEGDVNTVKFFPD 197
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDST 166
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 166 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 225
Query: 686 -HND 694
H D
Sbjct: 226 PHGD 229
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 204
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 205 LSSDGNYALSGSWD 246
LS+DG+ +GSWD
Sbjct: 287 LSADGSALCTGSWD 300
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 23 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 82
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 115
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 315 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 494
V S+ ++ + +IVS S+D + +WN L K T WV FSPN + V+
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS---VA 61
Query: 495 CG 500
CG
Sbjct: 62 CG 63
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 243 TFHGHEGDVNTVKFFPD 259
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDST 228
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 468 NHANPIIVSCG 500
N + V+CG
Sbjct: 118 NGQS---VACG 125
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 686 -HND 694
H D
Sbjct: 288 PHGD 291
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 204
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 205 LSSDGNYALSGSWD 246
LS+DG+ +GSWD
Sbjct: 349 LSADGSALCTGSWD 362
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 85 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 144
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
R+WDL G++ F+ H K V SV FS + + SG D ++W+ + + Y I
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII--PA 463
Query: 432 HSDWVSCVRFSP 467
H++ VS V++ P
Sbjct: 464 HANLVSQVKYEP 475
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW G + FE H + VAF + + + S DKT +LW+ + +Q +GH
Sbjct: 323 KLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGH 380
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDRLSR 518
S V + F + A + SCG D L+R
Sbjct: 381 SRSVYGIAFQQDGA--LAASCGLDSLAR 406
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 252 FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+RLWD+ G E H++ V +AF D S D ++W+ L + + G
Sbjct: 363 WRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD-LRTGRSILVFQG 421
Query: 432 HSDWVSCVRFSPN 470
H V V FSPN
Sbjct: 422 HIKPVFSVNFSPN 434
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +VW L + + GH + +V SP+G ASGG+D + +WDL K L+
Sbjct: 401 LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Query: 680 LD-HNDIIT 703
+ H ++++
Sbjct: 461 IPAHANLVS 469
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+LW++ T +DH + V FS + + + S D+T KLW T T +G
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EG 337
Query: 432 HSDWVSCVRFSPN 470
H D ++ V F P+
Sbjct: 338 HLDRLARVAFHPS 350
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 506 QTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
+T ++W + T +L + GHS + + DG+L AS G D A +WDL G+ +
Sbjct: 361 KTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
+T K+W T+ L GH L V P G + D LWD+N G L
Sbjct: 320 RTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ H T + +P D + ++S D+T +WK G + GH ++ V
Sbjct: 294 LKDHKERATDVVFSP-VDDCLATASADRTAKLWKTD------GTLLQTFEGHLDRLARVA 346
Query: 205 LSSDGNYALSGSWDKTF 255
G Y + S+DKT+
Sbjct: 347 FHPSGKYLGTTSYDKTW 363
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWD+ K R F H + +V F + SGS D +K+W+ + C T + G
Sbjct: 83 KLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYK--G 140
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
HS +S +RF+P+ +VS G D +
Sbjct: 141 HSRGISTIRFTPD--GRWVVSGGLDNV 165
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-H 688
+K+W + + GHS ++T+ +PDG SGG D +WDL GK LH H
Sbjct: 124 LKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183
Query: 689 NDIITALCF 715
I +L F
Sbjct: 184 EGPIRSLDF 192
Score = 40.7 bits (91), Expect = 0.001
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
+ ++WD+ + ++ H++ + ++ F+ D R +VSG D +K+W+ A
Sbjct: 123 NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 225 RTFRFLGQDFRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 398
R F G D+++ A GK T HT V SVAF +++G+ IKLW+ +
Sbjct: 29 RLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-V 87
Query: 399 AECKYTIQDDGHSDWVSCVRFSP 467
E K GH S V F P
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP 110
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
+K+W + K+ GH + V P G ASG D +WD+
Sbjct: 82 IKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 129
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
L VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 162 LDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 31.5 bits (68), Expect = 0.58
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
S IS + + DG + +SG D
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLD 163
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R F H + +V F + SGS D +++W+T + C T + G
Sbjct: 32 KLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK--G 89
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ +S + FSP+ +VS G D +
Sbjct: 90 HTRGISTIEFSPD--GRWVVSGGLDNV 114
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-H 688
++VW + GH+ ++T+ SPDG SGG D +WDL GK LH H
Sbjct: 73 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Query: 689 NDIITALCF 715
I +L F
Sbjct: 133 EGPIRSLDF 141
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
+ R+WD + ++ HT+ + ++ FS D R +VSG D +K+W+ A
Sbjct: 72 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 116 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
L VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 111 LDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
+K+W L K+ GH + V P G ASG D +WD
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 77
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
+ IS + S DG + +SG D
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLD 112
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
++W ++ G + FE HT VL +F D Q VS D +KLWN +EC T D
Sbjct: 566 KIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY--DQ 623
Query: 432 HSDWV 446
H D V
Sbjct: 624 HEDKV 628
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
++VW L K + GH G + + G L A+ G D K ++WD++ G H H
Sbjct: 84 IRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH 143
Query: 689 NDIITALCF 715
+++++ F
Sbjct: 144 KGVVSSILF 152
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 255 RLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTI 419
R+WDL A T ++ E H V S+A S D + S RDK + LW+ CK T+
Sbjct: 171 RVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYT 416
++ R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++
Sbjct: 381 EEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIG 440
Query: 417 IQDDGHSDWVSCVRFS 464
+ GH+ + V F+
Sbjct: 441 V-GTGHNGDILAVAFA 455
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAE 404
+WD+ G T F H V S+ F D+ + ++SGS D T+++W+ A+
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
KT H KD+ SVA + ++ + +GS D+T +W L + + + GH + V
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVE 548
Query: 459 FS 464
FS
Sbjct: 549 FS 550
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVK+W +++ GH+ + + DG+ S G D LW++N + + T D
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 686 -HNDIITAL 709
H D + AL
Sbjct: 623 QHEDKVWAL 631
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H + + SV FS ++ +++ S DKT+K+W +++ +GH+ V F +
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIW-AISDGSCLKTFEGHTSSVLRASFITDGTQ- 597
Query: 483 IIVSCGWDRL 512
VSCG D L
Sbjct: 598 -FVSCGADGL 606
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 392
RLW+ + H D+L+VAF+ + VSGS D+T+K+W+
Sbjct: 429 RLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 183
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
I+ V ++ + + +GS D+T
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRT 522
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 509 TVKVWHLT--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
TV+VW L N + K + H + ++ +S DG S G+D LWDL+D
Sbjct: 169 TVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKA 228
Query: 677 TLDHNDIITAL 709
T+ +++ A+
Sbjct: 229 TVATYEVLEAV 239
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
G + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 39 GDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 428
+LWD+ G+ F +H K SV FS ++ SGS D ++KLWN C TI++
Sbjct: 779 KLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNI 838
Query: 429 GHSDWVSCVRFSPNHAN 479
+ V CV+FSP ++
Sbjct: 839 AN---VCCVQFSPQSSH 852
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 398
D LW++A GK +++ H + V + FS D+ +VSGS+D +I++W+ +
Sbjct: 101 DIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLI 150
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 599 DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
DG+L SG +D +WD +H+ TL H
Sbjct: 274 DGNLLISGSEDGVVCVWDPKSLRHVRTLIH 303
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
+ +W + KL GH + + S D SL SG +D +W L
Sbjct: 102 IYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVD--NRQIVSGSRDKTIKLWN 392
F +HT V + N I+S S D+T K+W+
Sbjct: 169 FNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 502 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
LGQ + VW + GH +N VT SPD L A+G D K +W++ G T
Sbjct: 328 LGQLL-VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFIT 386
Query: 680 L-DHNDIITALCF 715
+H + +TAL F
Sbjct: 387 FTEHTNAVTALHF 399
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 374 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV++W + K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 500 TVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHN- 691
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 520
Query: 692 DIIT 703
D++T
Sbjct: 521 DVLT 524
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 542 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
LGQ + VW + GH +N VT SPD L A+G D K +W++ G T
Sbjct: 368 LGQLL-VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFIT 426
Query: 680 L-DHNDIITALCF 715
+H + +TAL F
Sbjct: 427 FTEHTNAVTALHF 439
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 414 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV++W + K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 540 TVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHN- 691
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 560
Query: 692 DIIT 703
D++T
Sbjct: 561 DVLT 564
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 473
F H DVL +++S ++ ++S S DKT++LW+ + K ++ HSD+V+C++F+P
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSS--KTCLKVFSHSDYVTCIQFNPVD 520
Query: 474 ANPII 488
N I
Sbjct: 521 DNYFI 525
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 461 LTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 637
L+ S H + +TV++W L++ K + HS Y+ + +P D + SG D K
Sbjct: 474 LSWSKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAK 532
Query: 638 AMLWDLNDGKHLHTLDHNDIITALCF 715
+W + D + + D ++++TA C+
Sbjct: 533 VRIWSIPDHQVVDWNDLHEMVTAACY 558
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWDL++ KT + H+ V + F+ VD+ +SGS D +++W ++ + + +D
Sbjct: 492 RLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW-SIPDHQVVDWNDL 549
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
H + V+ ++P+ ++ S
Sbjct: 550 H-EMVTAACYTPDGQGALVGS 569
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D
Sbjct: 482 LLSSSMDKTVRLWDLSSK------TCLKVFSHSDYVTCIQFNPVDDNYFISGSLD 530
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 141
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ +VS G D +
Sbjct: 142 HTRGVNVLRFTPD--GRWVVSGGEDNI 166
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLT 179
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 180 EFKSHEGQIQSLDFHPH 196
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS D+T+K W+ L +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPE 226
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 227 TAGVRCLSFNPD 238
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 680 L-DHNDIITALCF 715
H I +L F
Sbjct: 181 FKSHEGQIQSLDF 193
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
V +W + ++ GHS +++VT L A+G LWDL + K + TL
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIV 94
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 95 RTLTGHRSNCISVDFHP 111
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 141
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ +VS G D +
Sbjct: 142 HTRGVNVLRFTPD--GRWVVSGGEDNI 166
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLT 179
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 180 EFKSHEGQIQSLDFHPH 196
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS D+T+K W+ L +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPE 226
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 227 TAGVRCLSFNPD 238
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 680 L-DHNDIITALCF 715
H I +L F
Sbjct: 181 FKSHEGQIQSLDF 193
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
V +W + ++ GHS +++VT L A+G LWDL + K + TL
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIV 94
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 95 RTLTGHRSNCISVDFHP 111
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 177 KLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 234
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ IVS G D +
Sbjct: 235 HTRGVNVLRFTPD--GRWIVSGGEDNV 259
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK LH
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 273
Query: 680 L-DHNDIITALCF 715
H I +L F
Sbjct: 274 FKSHEGKIQSLDF 286
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS DKT+K W+ L +
Sbjct: 261 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD-LETFELIGSGGTE 319
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 320 TTGVRCLTFNPD 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R IVSG D +K+W+ L K
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-LTAGKLLH 272
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 273 EFKSHEGKIQSLDFHPH 289
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 175 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 231
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 260 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
V +W + ++ GHS +++VT L A+G LWDL + K + TL
Sbjct: 134 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTL 190
Score = 34.3 bits (75), Expect = 0.082
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 129 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEAKVV 187
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 188 RTLTGHRSNCVSVNFHP 204
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD+ ++ +E+H K SV FS + +VSGS D +K+W T E I D
Sbjct: 447 VWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEAS-VINIDMK 505
Query: 435 SDWVSCVRFSPNHANPIIV 491
++ + CV+++P +N I V
Sbjct: 506 AN-ICCVKYNPGSSNYIAV 523
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ R F HT + V +V++ + GS + +++
Sbjct: 573 RLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
R+WDL + F+ H K VLSV FS + + SG D ++W+ + + Y I
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII--PA 212
Query: 432 HSDWVSCVRFSP 467
H + VS V++ P
Sbjct: 213 HVNLVSQVKYEP 224
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 515 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+VW L + + GH + +V SP+G ASGG+D + +WDL K L+ +
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII 210
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 303 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 395
H + V V FS VD+ + + S D+T K+W T
Sbjct: 105 HKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ + FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
HS Y+ V V P S DM LWD G
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 524 KLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
TVK+W K+ + GH + ++ SP+G ASG D +W + +GK + T
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTG 581
Query: 689 NDIITALCF 715
N I +C+
Sbjct: 582 NGGIFEVCW 590
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
GH G +N V P GSL AS D A +W++ +H L
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL 486
Score = 35.5 bits (78), Expect = 0.035
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSGSRDKTIKLWNTLAEC 407
++W++ +HTK++ ++ +S N+Q + S S D T+KLW+ AE
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD--AEL 530
Query: 408 -KYTIQDDGHSDWVSCVRFSPN 470
K +GH + V + FSPN
Sbjct: 531 GKMLCSFNGHREPVYSLAFSPN 552
Score = 34.7 bits (76), Expect = 0.062
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT 679
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
R+W L G+ H + S+ ++ +++GS D+T +W+ AE ++ Q + H
Sbjct: 349 RIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWKQQFEFH 406
Query: 435 S------DWVSCVRFSPNHANPIIVSC 497
S DW + V F+ + + +I C
Sbjct: 407 SGPTLDVDWRNNVSFATSSTDSMIYLC 433
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 190 ISDVVLSSDGNYALSGSWDKTFVCGI 267
DV ++ ++A S + ++C I
Sbjct: 410 TLDVDWRNNVSFATSSTDSMIYLCKI 435
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
HS Y+ V V P S DM LWD +G
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
HS Y+ V V P S DM LWD +G
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
HS Y+ V V P S DM LWD +G
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 HYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H + L TVKV+++ + K ++ GH + + +S DG L +G +D +W L+
Sbjct: 554 HIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF 613
Query: 662 GK-HLHTLDHNDIITALCF 715
G H H D + + F
Sbjct: 614 GDCHKSIFAHGDSVMGVKF 632
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 685
++++W ++N H G + + + GS+ ASG KD +LWD+ L L
Sbjct: 87 SIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRG 146
Query: 686 HNDIITALCF 715
H D +T L F
Sbjct: 147 HRDQVTDLVF 156
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 213
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 214 DGNYALSGSWDK 249
G +S S DK
Sbjct: 159 GGKKLVSSSKDK 170
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
H V+ + S D IV+GS+DK +K+W +C +I H D V V+F N
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI--FAHGDSVMGVKFVRN--T 636
Query: 480 PIIVSCGWDRL 512
+ S G DRL
Sbjct: 637 HYLFSIGKDRL 647
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
R+WD G F H V ++ ++ + SGS+D I LW+ + E + GH
Sbjct: 89 RIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SGLFRLRGH 147
Query: 435 SDWVSCVRF 461
D V+ + F
Sbjct: 148 RDQVTDLVF 156
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D LWD+ R H V + F +++VS S+DK +++W+ + I
Sbjct: 129 DIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 429 GHSD 440
HS+
Sbjct: 189 HHSE 192
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
I H GH + +VT+S D +L S + +W+ + G L T+D
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTID 444
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
DVL+VA S D + I D T+K++ + K+ + GH V C+ S
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDIS 591
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LRGH VT + ++ SSS+DK L VW L E + + + + GH + V
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLV-SSSKDKFLRVWDL---ETQHCM--QIVSGHHSEVWSVD 197
Query: 205 LSSDGNYALSGSWDK 249
+ Y ++GS D+
Sbjct: 198 TDPEERYVVTGSADQ 212
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 169 LYGHSHFISDVVLSSDGNYALSGSWDK 249
LYGH + + +SSDG ++GS DK
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDK 604
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHLKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 211 SDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 197 GDKPYLITGSDDHT 210
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
F H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDI--ETQSCLKLFAHNDYVTCVQFNP 569
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 500 LGQTVKVWHL-TNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHL 673
+ +TV++W + T LK+ H+ Y+ V +P D SG D K +W++++ + +
Sbjct: 538 MDKTVRLWDIETQSCLKL--FAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVV 595
Query: 674 HTLDHNDIITALCF 715
D +++TA+C+
Sbjct: 596 EWNDLKEMVTAVCY 609
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWD+ + F H V V F+ +D +SGS D I++WN + ++ +
Sbjct: 543 RLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN--ISNRQVVEWND 599
Query: 432 HSDWVSCVRFSPN 470
+ V+ V ++P+
Sbjct: 600 LKEMVTAVCYTPD 612
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 132
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 82 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D
Sbjct: 532 LLLSSSMDKTVRLWDIETQS------CLKLFAHNDYVTCVQFNPLDEDYFISGSLD 581
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K + GH
Sbjct: 288 KIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGKLLKEFRGH 346
Query: 435 SDWVSCVRFSPNHANPIIVS 494
+ +V+ F+ + + I S
Sbjct: 347 TSYVNHAIFTSDGSRIITAS 366
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQ 422
Q R+ L +GK + F HT V F+ D +I++ S D T+K+W++ +C T +
Sbjct: 327 QTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
Query: 423 DD----GHSDWVSCVRFSPNHANPIIV 491
G V+ + P + I+V
Sbjct: 387 PPPPLRGTDASVNSIHLFPKNTEHIVV 413
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +3
Query: 258 LWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+WD +GK + F H VL + FS D+ + SGS+D IK+W +
Sbjct: 239 VWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWR-IRTGVC 297
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ D HS V+ + FS + + ++S +D+ +R
Sbjct: 298 IRRFDAHSQGVTSLSFSRDGSQ--LLSTSFDQTAR 330
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
QT ++ L + KL GH+ Y+N + DGS + D +WD
Sbjct: 327 QTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCF 715
H + + S D + ASG +D K +W + G + D H+ +T+L F
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSF 313
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
R+WD+ +T H ++LS ++ D+ + + S DKT+K+W+ + +G
Sbjct: 175 RIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNG 234
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWD 506
H V V+FSP H +I SC +D
Sbjct: 235 HGYAVRKVKFSP-HRRSLIASCSYD 258
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWD 652
+TVKVW + + ++ + L GY + V SP SL AS DM LWD
Sbjct: 215 KTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 159
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +3
Query: 285 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 455
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 456 RFSPNHANPIIVSCG 500
+ P H++ + + G
Sbjct: 73 CWDPKHSDLVATASG 87
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-----NDGKHLHTLDHNDIITALCF 715
GH +++V + +G+ ASG D A +W++ + K L H D + LC+
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW 74
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 92 RLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
TV+V + K H+ + + P G A G D LWD++D L T
Sbjct: 172 TVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRT 228
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +3
Query: 246 QDFRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKY 413
Q+ LWDLA K +F H +K V+ F +D+ I SGS D + +WN L K
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN-LKNTKP 477
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 506
GHS V+CV ++P NP +++ D
Sbjct: 478 LEVLSGHSMTVNCVSWNPK--NPRMLASASD 506
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 509 TVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T +W L + K+++ H H ++ V+ SPD + + G LWD++ G HT
Sbjct: 247 TAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHT 306
Query: 680 LDHND 694
+N+
Sbjct: 307 FGNNN 311
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 389
+W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 469 IWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 506 QTVKVWHLTN-CKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
Q + +W L K + GH S Y + + D S ASG +D + +W+L + K L
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPL 478
Query: 674 HTL 682
L
Sbjct: 479 EVL 481
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 240 LGQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+G+D R++D K + + +L ++S+D + I++G D +++W+ + + K
Sbjct: 321 VGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWS-MEDRKV 379
Query: 414 TIQDDGHSDWVSCVRFSPNHANP 482
+GH+ WVS V F N ++P
Sbjct: 380 VAWGEGHNSWVSGVAFDSNWSSP 402
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 N 691
N
Sbjct: 93 N 93
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC 712
+N P SGG+D +WD GK L D H IT+LC
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLC 200
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 N 691
N
Sbjct: 93 N 93
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC 712
+N P SGG+D +WD GK L D H IT+LC
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLC 200
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 N 691
N
Sbjct: 93 N 93
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC 712
+N P SGG+D +WD GK L D H IT+LC
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLC 200
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 240 LGQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+G+D R++D + K + + +L A+S+D + +++G D +++W+ + + K
Sbjct: 321 VGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKV 379
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSRSG 524
+GH+ WVS V F ++P G + + R G
Sbjct: 380 VAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFG 416
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
GH+ ++ +V SPDG A+G D LWDL + T+ +HND + ++ F
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 270 AAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDW 443
A GKT HT VLSV S D I +GS D+T++LW+ + + IQ H+D
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD--LKMRAAIQTMSNHNDQ 287
Query: 444 VSCVRFSP 467
V V F P
Sbjct: 288 VWSVAFRP 295
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +TVK+W L + GHS + + P G + AS D ++D++ +
Sbjct: 38 LDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAV 97
Query: 680 LD 685
L+
Sbjct: 98 LE 99
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 190 ISDVVLSSDGNYALSGSWDKT 252
+ V S DG +GS D+T
Sbjct: 246 VLSVDASPDGGAIATGSSDRT 266
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQD 425
L+D +G+ H+K V SV F D+ +++ S DKT+++W + C YT+ D
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWD 506
HS V V P N VS D
Sbjct: 308 --HSAEVRAVTVHP--TNKYFVSASLD 330
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTF----VCGISLQARLPDDSRTI 306
+ V + Y +S S D T+ + S A++ DDS+ +
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/46 (23%), Positives = 29/46 (63%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQD 425
L+D +G+ H+K V SV F D+ +++ S DKT+++W + C YT+ D
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWD 506
HS V V P N VS D
Sbjct: 308 --HSAEVRAVTVHP--TNKYFVSASLD 330
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTF----VCGISLQARLPDDSRTI 306
+ V + Y +S S D T+ + S A++ DDS+ +
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/46 (23%), Positives = 29/46 (63%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 521 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
W + + K+K+ GHS YL+TV S +G +D A +WD GK + + D
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQD 243
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +3
Query: 237 FLGQD---FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL-- 398
+ GQD F +WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+
Sbjct: 322 YFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSM 381
Query: 399 -AECKYTIQDDGHSDWVSCVRFSPN 470
A+ T+ HS V FSP+
Sbjct: 382 GAKKPKTLSTVNHSRAVHSAYFSPS 406
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCV 455
K F HT +VL +++S DN ++S S DKT++LW + +C H+ +V+ V
Sbjct: 319 KPLYEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF---AHNSYVTSV 374
Query: 456 RFSPNHAN 479
+F+P + N
Sbjct: 375 QFNPVNEN 382
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH 676
+ +TV++W + + + H+ Y+ +V +P + + SG D K +W+++ +
Sbjct: 347 MDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVVD 405
Query: 677 TLDHNDIITALCF 715
D DII+A+C+
Sbjct: 406 WADLKDIISAVCY 418
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 208 SS-DGNYALSGSWD 246
+ + NY +SGS D
Sbjct: 377 NPVNENYFMSGSID 390
Score = 31.9 bits (69), Expect = 0.44
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + F H V SV F+ V+ +SGS D +++WN ++ C D
Sbjct: 352 RLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN-ISGCSVVDWAD- 408
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D +S V + P+ II S
Sbjct: 409 LKDIISAVCYRPDGQGGIIGS 429
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH+G + ++ S D L S D LW + L HN +T++ F
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQF 376
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +1
Query: 148 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKT 252
+ I +K LY GH+ + D+ S D NY LS S DKT
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKT 350
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 132
HN +VT + NP + +S S D + +W ++
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNIS 399
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + + I H ++ V +P D + SG D K +WD++ + +
Sbjct: 384 ETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYT 443
Query: 683 DHNDIITALCF 715
D I+TALC+
Sbjct: 444 DIRQIVTALCY 454
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 473
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 474 ANPII 488
N I
Sbjct: 417 DNYFI 421
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
RLW + + R H V VAF+ VD+ +SGS D +++W+
Sbjct: 387 RLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
RL+D+ K R F HT + + FS D + ++S S D ++++W+ + + D H
Sbjct: 540 RLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI---DGVH 596
Query: 435 SDW-VSCVRFSPN 470
D ++ + SPN
Sbjct: 597 VDVPITALSLSPN 609
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
++++ + K+ GH+ + + S DG S D +WD+ K + + H
Sbjct: 539 IRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV-HV 597
Query: 692 DI-ITAL 709
D+ ITAL
Sbjct: 598 DVPITAL 604
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
VK+W + + GH G + + VS + +L AS D +W L DG + L H
Sbjct: 329 VKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGH 388
Query: 689 NDIITALCF 715
+TA+ F
Sbjct: 389 TGAVTAIAF 397
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 123
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS---VDNRQIVSGSRDKTIKLWN 392
R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 372 RVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
G +RF + V + +S+DNR +++ D I +WN A+ GHS+ S
Sbjct: 587 GGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSE--SSY 643
Query: 456 RFSPNHANP-IIVSCGWD 506
+ NP I +S G+D
Sbjct: 644 VLDVHPFNPRIAMSAGYD 661
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP N
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPVDEN 560
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH 676
+ +TV++W + K + H+ Y+ + SP D + SG D K +W + D +
Sbjct: 525 MDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
Query: 677 TLDHNDIITALCF 715
D ++++TA C+
Sbjct: 584 WSDLHEMVTAACY 596
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWD+ KT + H V + FS VD +SGS D I++W+ + ++ ++
Sbjct: 530 RLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS--IQDRHVVEWSD 586
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
+ V+ ++P+ +I S
Sbjct: 587 LHEMVTAACYTPDGQGALIGS 607
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 202 VLSS-DGNYALSGSWD 246
S D NY LSGS D
Sbjct: 553 QFSPVDENYFLSGSLD 568
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVK+W++ KL+ GH ++ S DG + DM A LW + GK +
Sbjct: 233 KTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Query: 686 HNDIITALC 712
+ T C
Sbjct: 293 GHHKATVCC 301
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 255 RLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A
Sbjct: 59 RLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA 109
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 205 LSSDGNYALSGSWDKT 252
S DG + ++ S D T
Sbjct: 261 FSVDGEFLVTASSDMT 276
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W++ K + H + V FSVD +V+ S D T +LW+ A + + H
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 435 SDWVSC 452
V C
Sbjct: 296 KATVCC 301
Score = 35.5 bits (78), Expect = 0.035
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = +3
Query: 258 LWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
+W L GK T + + H +L S N+ + + S DKT+K+WN + K
Sbjct: 188 VWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDGFKLE 246
Query: 417 IQDDGHSDWV-SCV 455
GH WV CV
Sbjct: 247 KVLTGHQRWVWDCV 260
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
G TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+
Sbjct: 260 GGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T VW N + + GHSG + +S D S +G D A LWD+ GK L T
Sbjct: 60 TPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFT 116
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 194 GEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC 712
+N P SGG+D +WD GK L D H + IT+LC
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLC 227
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 205 LSSDGNYALSGSWDKT 252
+SDG+ +S S DKT
Sbjct: 104 WTSDGSQIVSASPDKT 119
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW L + + GH + +++SPDGS + G D K +WD+
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
D ++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 203 DVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLNDGKHLHTL 682
+TV+ W + K HS ++N+ + G L SG D A LWD+ + T
Sbjct: 118 KTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF 177
Query: 683 DHNDIITALCF 715
ITA+ F
Sbjct: 178 PDKYQITAVSF 188
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H V ++ F+ I SGS D+ I LW +CK + GH + + + ++ + +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ- 110
Query: 483 IIVSCGWDRLSRS 521
IVS D+ R+
Sbjct: 111 -IVSASPDKTVRA 122
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 392
R WD+ GK ++ +H+ V S + I+SGS D T KLW+
Sbjct: 121 RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV-SCVRFSPNHAN 479
H +L + ++ D QIVS S DKT++ W+ + K + HS +V SC P
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWD-VETGKQIKKMAEHSSFVNSC---CPTRRG 150
Query: 480 PIIVSCGWD 506
P ++ G D
Sbjct: 151 PPLIISGSD 159
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 533 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
+CK + GH + + + DGS S D WD+ GK + + +H+ + +
Sbjct: 85 DCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Query: 710 C 712
C
Sbjct: 145 C 145
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD- 685
T K+W + + I + V+ S +GG D +WDL G+ TL+
Sbjct: 162 TAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG 220
Query: 686 HNDIITAL 709
H D IT +
Sbjct: 221 HQDTITGM 228
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKHLHTL-DHNDIITAL 709
GH + T+ +P G+L ASG D + LW ++ D K+ L H + I L
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 246
D I + D + VW L + E L GH I+ + LS DG+Y L+ D
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATM-----TLEGHQDTITGMSLSPDGSYLLTNGMD 243
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + C + H+ ++ V +P D + SG D K +WD+ + +
Sbjct: 343 ETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYT 401
Query: 683 DHNDIITALCF 715
D DI+TA+C+
Sbjct: 402 DIRDIVTAVCY 412
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 346 RLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD- 402
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D V+ V + P+ +I S
Sbjct: 403 IRDIVTAVCYRPDAKGAVIGS 423
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 208 SS-DGNYALSGSWD 246
+ D NY +SGS D
Sbjct: 371 NPVDDNYFISGSID 384
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 428 WTQRLGVMCQIL-TQSC-----QPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVT 589
W ++LGV+ +L + C Q H + L++ + H G + +
Sbjct: 166 WLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMK 225
Query: 590 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
SPDG AS G+D +W + + + T + ++ + + F
Sbjct: 226 FSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYF 267
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + ++ S G L +S D LW + + L T HN+ +T + F
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAF 370
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + C + H+ ++ V +P D + SG D K +WD+ + +
Sbjct: 343 ETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYT 401
Query: 683 DHNDIITALCF 715
D DI+TA+C+
Sbjct: 402 DIRDIVTAVCY 412
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 346 RLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD- 402
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D V+ V + P+ +I S
Sbjct: 403 IRDIVTAVCYRPDAKGAVIGS 423
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 208 SS-DGNYALSGSWD 246
+ D NY +SGS D
Sbjct: 371 NPVDDNYFISGSID 384
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 428 WTQRLGVMCQIL-TQSC-----QPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVT 589
W ++LGV+ +L + C Q H + L++ + H G + +
Sbjct: 166 WLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMK 225
Query: 590 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
SPDG AS G+D +W + + + T + ++ + + F
Sbjct: 226 FSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYF 267
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + ++ S G L +S D LW + + L T HN+ +T + F
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAF 370
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 41.1 bits (92), Expect = 7e-04
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 190 ISDVVLSSDGNYALSGSWDK 249
+ D+ S+DG+ L+ +DK
Sbjct: 329 VRDICFSNDGSKFLTAGYDK 348
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
++WD+ +GK R + H K V + FS D + ++ DK IK W+T
Sbjct: 308 KIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDT 355
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 VKVWHLTNC-KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
VK+W + N K ++GH+ + + S DGS + G D WD G+ + T
Sbjct: 307 VKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFST 366
Query: 689 NDI 697
I
Sbjct: 367 GKI 369
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 560 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDI 697
GH +GY V SPDG SG + K WD K TL HN +
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
GH G L + SP D +L A+GG D KA LW + +G L H D ++ L F
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF 121
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN- 479
HT+ + + + ++ +SGS+D ++ + N + K + H+D V CV+FSP+ A
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTG-KVVSSLNSHTDSVECVKFSPSSATI 299
Query: 480 PIIVSCGWDR 509
P+ + G D+
Sbjct: 300 PLAATGGMDK 309
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 202 VLSSDGNYALSGSWD 246
S DG SG D
Sbjct: 120 AFSYDGQLLASGGLD 134
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LCASGGKDMKAMLWDLNDGKHLHT 679
+V + ++ K+ + H+ + V SP + L A+GG D K ++WDL
Sbjct: 265 SVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFI 324
Query: 680 LDHNDIITAL 709
+H + +T+L
Sbjct: 325 CEHEEGVTSL 334
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
LW + G H V +AFS D + + SG D +++++ + + DG
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL-DGPG 155
Query: 438 DWVSCVRFSP 467
+ VR+ P
Sbjct: 156 AGIEWVRWHP 165
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+W + N GH ++ + S DG L ASGG D ++D + G LD
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLD 152
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC 712
GH G +N + + +GSL SG D++ +W+ + K LH++D C
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 468 NHANPIIVSCGWD 506
++ ++VS D
Sbjct: 104 ETSDELVVSGAGD 116
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 464
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 465 PNHANPIIVSCGWDRLSR 518
P + IV+C D + R
Sbjct: 112 PFSDDRTIVTCAADGMVR 129
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G +NTV+ + +G + SG D + +LWD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 437 RLGVMCQILTQSCQPHYCILWLG-QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 613
R V C IL +S + Y I + VKVW + + GH G + + VS +
Sbjct: 245 RNAVYCAILDRSGR--YVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFI 302
Query: 614 ASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
AS D +W L DG + L H +TA+ F
Sbjct: 303 ASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAF 337
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W + H D+ +A S +N I S S D I++W ++ GH
Sbjct: 270 KVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLR-GH 328
Query: 435 SDWVSCVRFSPNHANP 482
+ V+ + FSP +P
Sbjct: 329 TGAVTAIAFSPRPGSP 344
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 123
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 392
R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 312 RVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 163 KRLYGHSHFISDVVLSSDGNYALSGSWDK 249
KRL GH + + +L G Y ++GS D+
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDR 267
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DG 431
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWD 506
HS V+ + F P + +I SC D
Sbjct: 735 HSSMVTSLDFHP-IKDDLICSCDND 758
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
S DG + AS G D KA+LW + K TL +H +IT + F
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRF 701
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL---NDGKHLHTLDHN 691
GH+ +N+V P G AS +DM +W L ++G+ +H L N
Sbjct: 816 GHANPINSVCWDPSGDFLASVSEDM-VKVWTLGTGSEGECVHELSCN 861
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 479 PHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
P ++ Q++++W+++ K + H G + ++ VS L AS D LW
Sbjct: 875 PSLLVIGCYQSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+ ++VW + GH+ + + + G C SG D LWDL + LHT
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 686 -HNDIITAL 709
H D + AL
Sbjct: 295 VHTDSVWAL 303
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD G + + HT +V + R +SGS D I+LW+ C +T
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 432 HSDWVSCVRFSPNH 473
S W S +H
Sbjct: 298 DSVWALACNPSFSH 311
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 467
FE H V A + ++ +VS S D T+K W+ L++ C T++ HSD+V+C+ +
Sbjct: 80 FESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAA 136
Query: 468 NHANPIIVSCG 500
+ N ++ S G
Sbjct: 137 KN-NNVVASGG 146
Score = 34.3 bits (75), Expect = 0.082
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 208 SSDGNYALSGSWD 246
S G + LSGS D
Sbjct: 264 DSTGRFCLSGSSD 276
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 488
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 489 VSCGWDRLSRS--GISLTVSSR 548
VSC D ++ G+S V +R
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTR 120
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 280 RLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+ ++VW + GH+ + + + G C SG D LWDL + LHT
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 686 -HNDIITAL 709
H D + AL
Sbjct: 295 VHTDSVWAL 303
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD G + + HT +V + R +SGS D I+LW+ C +T
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 432 HSDWVSCVRFSPNH 473
S W S +H
Sbjct: 298 DSVWALACNPSFSH 311
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 467
FE H V A + ++ +VS S D T+K W+ L++ C T++ HSD+V+C+ +
Sbjct: 80 FESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAA 136
Query: 468 NHANPIIVSCG 500
+ N ++ S G
Sbjct: 137 KN-NNVVASGG 146
Score = 34.3 bits (75), Expect = 0.082
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 208 SSDGNYALSGSWD 246
S G + LSGS D
Sbjct: 264 DSTGRFCLSGSSD 276
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 488
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 489 VSCGWDRLSRS--GISLTVSSR 548
VSC D ++ G+S V +R
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTR 120
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 280 RLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +3
Query: 255 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 410
RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
+TVK+W+L KL+ GH ++ S DG + D A LW + GK
Sbjct: 239 KTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 205 LSSDGNYALSGSWDKT 252
S DG Y ++ S D T
Sbjct: 267 FSMDGEYLVTASSDTT 282
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
+ + H +L S N+ + + S DKT+K+WN L K GH WV FS
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHERWVWDCDFS 268
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
++W+L K + H + V FS+D +V+ S D T +LW+ A
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
++WDL + R F V +V + +++SG ++ I++W+ A+
Sbjct: 109 KIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRAD 157
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/92 (31%), Positives = 46/92 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTFVCGISLQARL 285
+ V + + Y +S S D T+ C L + L
Sbjct: 312 VRAVTVHATNKYFVSASLDSTW-CFYDLSSGL 342
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
L+D +G+ H+K V S+ F D +++ S DKT+++W + YT
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYT 300
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
VK+W + + GH+G + +++ S +G A+ D LWDL K+ T D
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNFRTFDFP 436
Query: 692 D 694
D
Sbjct: 437 D 437
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
+WD+++G+ HT V +V S +R +VS + D+TIKLW+
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKY 413
GQD ++WD +G + ++L +A + DN+ +++ + + +W+ + ++
Sbjct: 250 GQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRH 309
Query: 414 TIQDDGHSDWVSCV---RFSPNHANPIIVSCGWDR 509
T+ GH+D V V +FS H +VS +DR
Sbjct: 310 TL--TGHTDKVCAVDVSKFSSRH----VVSAAYDR 338
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LWDL G T T + ++ S+D + SG D ++LW+ + K + GH
Sbjct: 341 KLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQTGKLLSEVAGH 398
Query: 435 SDWVSCVRFSPNHANPIIVS 494
S V+ V S N N I+ S
Sbjct: 399 SSAVTSVSLSRN-GNRILTS 417
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+ VK+W + L + G G + + V+ D + +WD++ G+ HTL
Sbjct: 253 RAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLT 312
Query: 683 DHNDIITAL 709
H D + A+
Sbjct: 313 GHTDKVCAV 321
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWDLNDGKHLHTLDHND 694
VW +++ +++ GH+ + V VS S S D LWDL+ G +T+
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS 358
Query: 695 IITALC 712
A+C
Sbjct: 359 NCNAIC 364
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 631
+++W + KL GHS + +V++S +G+ + G+D
Sbjct: 381 LRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 459 FSP 467
F+P
Sbjct: 404 FNP 406
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+V++W + C+ + H+ Y+ +V +P D SG D K +W + + + D
Sbjct: 378 SVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWAD 436
Query: 686 HNDIITALCF 715
I+TA+C+
Sbjct: 437 ARGIVTAVCY 446
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + F H V SV F+ VD+ +SGS D +++W+ ++C+ D
Sbjct: 380 RLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQCQVVDWADA 437
Query: 432 HSDWVSCVRFSPNHANPII 488
V+ V + P+ II
Sbjct: 438 RG-IVTAVCYQPDGQAVII 455
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
LGHSG + ++ S + L S D LW + L HN+ +T++ F
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQF 404
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 459 FSP 467
F+P
Sbjct: 404 FNP 406
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+V++W + C+ + H+ Y+ +V +P D SG D K +W + + + D
Sbjct: 378 SVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWAD 436
Query: 686 HNDIITALCF 715
I+TA+C+
Sbjct: 437 ARGIVTAVCY 446
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + F H V SV F+ VD+ +SGS D +++W+ ++C+ D
Sbjct: 380 RLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQCQVVDWADA 437
Query: 432 HSDWVSCVRFSPNHANPII 488
V+ V + P+ II
Sbjct: 438 RG-IVTAVCYQPDGQAVII 455
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
LGHSG + ++ S + L S D LW + L HN+ +T++ F
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQF 404
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD+ + + F H V + F ++ SGS D+T+K+WN + + + ++ GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKAFITENHGH 305
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
HS + VS DG A+GG D +WD+ +H+ H + ++ LCF
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
+C +T+K+W + LK+ GH G + + VS + S G D + WDL
Sbjct: 185 FCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN 244
Query: 665 K 667
K
Sbjct: 245 K 245
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 205 LSSDGNYALSGSWDKTFVC 261
+S+ Y S DK C
Sbjct: 220 VSNRHTYMFSAGDDKQVKC 238
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R+WD+ K H DV SV + Q+++GS D TIK W+
Sbjct: 279 RVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 270 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH- 688
VK W L K+ ++ GH + + + P + +GG+D +WD+ + L H
Sbjct: 236 VKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHD 295
Query: 689 NDIITAL 709
+D+ + L
Sbjct: 296 SDVFSVL 302
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 383
+ WDL GK+ +H K V ++A VS S D K
Sbjct: 320 KFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GH G++ +V P +G D +WD+ G
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 655 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 713
Query: 686 HN 691
++
Sbjct: 714 NS 715
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 534 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 593
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 594 APVMSIDFHPKKTE-LLCSC 612
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 699 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 756
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 757 ECVISALAQSP--STGVVASASHDK 779
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
WD++ G+ R+F H +V +V F+ + +VS D+++++W+
Sbjct: 87 WDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
+C + V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 240 LGQDFRLWDLAAG-KTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 407
L Q+ RLW++ K R++ H + + S I SGS D + +W+ +
Sbjct: 463 LNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHR-STG 521
Query: 408 KYTIQDDGHSDWVSCVRFSPNH 473
K ++ GH+ V+CV +SP +
Sbjct: 522 KLIVELPGHAGAVNCVSWSPTN 543
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 452
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 453 VRFSPNHANPIIVSCGWDRLSR 518
+ +SP+ +++CG + + R
Sbjct: 325 ILWSPDDRQ--VLTCGAEEVIR 344
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 658
V +WH + KL + GH+G +N V+ SP + AS D +W L+
Sbjct: 513 VYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 43 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGN 222
W Q + N KY + SSS+D+T I+W+++ D + + L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD--GHISLKHTLVGHHKPVIAILWSPDDR 332
Query: 223 YALS 234
L+
Sbjct: 333 QVLT 336
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSC 452
H K V+++ +S D+RQ+++ ++ I+ W+ +C + + G S +SC
Sbjct: 318 HHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISC 367
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 184 HFISDVVLSSDGN 222
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 506 QTVKVWHLT---NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
QT +W ++ + LK +GH + + SPD + G + WD++ G +H
Sbjct: 296 QTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVH 355
Query: 677 TLDHNDIITALC 712
+ I C
Sbjct: 356 MYEKGGISPISC 367
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 282 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
T R + + S + S DN+ I+ ++ I+LWN + K + GH
Sbjct: 435 TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGH 485
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 435 SDWVSCVRFSPNHANPIIVS 494
S++V+CVRF+P+ + I VS
Sbjct: 187 SNFVNCVRFAPDGSKFITVS 206
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
GH G + V+ SPDG + D A +WD++D
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 539 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
K K++ HS ++N V +PDGS + D K +++D + L L +D
Sbjct: 178 KFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDD 229
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
L + VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 511 LNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G ++ + SPD S+ AS + +A++WD
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWD 519
Score = 27.5 bits (58), Expect = 9.4
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +3
Query: 225 RTFRFL--GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R FR + G+DF ++ K +H+ V V F+ D + ++ S DK +++
Sbjct: 156 RPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYD 215
Query: 393 --TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 494
T DDGH + V +SP+ + VS
Sbjct: 216 GKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVS 251
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
++WD G+ ++ +H K SV FS D + VSGS D ++KLW ++ E K ++
Sbjct: 791 QIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-SINE-KRSLGTIW 848
Query: 432 HSDWVSCVRFSPNHANPII 488
V CV+FS +++N ++
Sbjct: 849 SPANVCCVQFS-SYSNHLL 866
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F +D+ IVS S D ++KLWN
Sbjct: 893 HEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 205 LSSDGNYALSGSWDKTFVC 261
+S+ Y S DK C
Sbjct: 226 VSNRHTYMFSAGDDKQVKC 244
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
+C +T+K+W + LK+ GH + + VS + S G D + WDL
Sbjct: 191 FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN 250
Query: 665 KHLHTLDHNDIITALC 712
K + + H + C
Sbjct: 251 KVIRSY-HGHLSGVYC 265
Score = 35.5 bits (78), Expect = 0.035
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 270 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVS 449
A K R + H V SVAF N +GS D+TIK+W+ +A + GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVR 222
Query: 450 CVRFSPNH 473
+ S H
Sbjct: 223 GLAVSNRH 230
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R+WD+ H V SV + Q+V+GS D TIK W+
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 KVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
+VW + K++I L GH + +V P +G D WDL GK + TL H+
Sbjct: 285 RVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHH 343
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
VK W L K+ ++ GH + + + P + +GG+D +WD+ + L +
Sbjct: 242 VKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGH 301
Query: 692 D 694
D
Sbjct: 302 D 302
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ V + T P P +++ S D T+ W L YG L H + +
Sbjct: 298 LSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351
Query: 205 LSSDGNYALSGSWDKT 252
L N S S D T
Sbjct: 352 LHPKENAFASASADNT 367
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 383
+ WDL GKT H K V ++ S S D T K
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GH G++ +V P +G D +WD+ G
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 471 HANPIIVSCGWDRLSRSG 524
+ I++ G D R G
Sbjct: 110 TDDRTIITSGADGQVRLG 127
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 444 VSCVRFSP 467
V V + P
Sbjct: 163 VKGVTWDP 170
Score = 35.5 bits (78), Expect = 0.035
Identities = 26/86 (30%), Positives = 37/86 (43%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 181 SHFISDVVLSSDGNYALSGSWDKTFV 258
+ V G++ S S DKT +
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVI 185
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L TV +W++ GH + VT P GS AS D ++W +D H
Sbjct: 138 LDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHR 197
Query: 680 LD 685
D
Sbjct: 198 TD 199
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L +W++ G T H V V + I S S DKT+ +W T ++
Sbjct: 138 LDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRT-SDWGMAH 196
Query: 420 QDDGH 434
+ DGH
Sbjct: 197 RTDGH 201
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 533 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
N K + GH+ + + SPD S+ ASG D +W++ G
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTG 150
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 25 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 183
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ V GN S SWD T
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCT 228
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 25 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 183
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ V GN S SWD T
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCT 228
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
GH + +V P SL SGGKD LWD G+ L +L H +I+ ++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSV 316
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LWD +G+ H VLSV ++ + +++ S+D+ IKL++ + K GH
Sbjct: 293 KLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IRTMKELQSFRGH 351
Query: 435 SDWVSCVRFSPNH 473
+ V+ + + P H
Sbjct: 352 TKDVTSLAWHPCH 364
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 389
Q +L+D+ K + F HTKDV S+A+ + + VSGS D +I W
Sbjct: 332 QIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ + D+ G SGS D T
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHT 419
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
H DV SV + +VSG +D+ +KLW+T + + GH + V V+++ N
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSG-RELCSLHGHKNIVLSVKWNQN 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 31 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 208 SSDGNYALSGSWDK 249
+ +GN+ L+ S D+
Sbjct: 319 NQNGNWLLTASKDQ 332
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
Q VK+W + + + GH + +V + +G+ + KD L+D+ K L +
Sbjct: 290 QLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFR 349
Query: 683 DHNDIITALCF 715
H +T+L +
Sbjct: 350 GHTKDVTSLAW 360
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 464
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RF
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 465 PNHAN 479
P + N
Sbjct: 267 PVNNN 271
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 163 KRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
K+L GHS ++D SS+ Y S S DKT
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKT 239
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 25 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 135
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 258 LWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAECKYTI 419
+WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+ +T
Sbjct: 254 IWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTF 313
Query: 420 QDDGHSDWVSCVRFSPNHANPIIVSC 497
D H + V V ++P + I+ SC
Sbjct: 314 --DSHKEEVFQVGWNPKN-ETILASC 336
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 198
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 199 VVLSSDGNYALSGSWDKT 252
+ S+DGN +S D T
Sbjct: 105 LTASTDGNVLVSCGTDCT 122
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
+++W +++ + GH G + +T S DG++ S G D LW++
Sbjct: 81 IRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 303 HTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
HTK V V +S D ++SGS D ++LW A
Sbjct: 318 HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKA 353
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 392
++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
V+VW + +L H + ++ S D +L ASG D LW +N G + T+
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F VD+ +VS S D T+KLW+
Sbjct: 661 HHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 198
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 199 VVLS-SDGNYALSGSWDKTFV 258
V LS SDG A ++ FV
Sbjct: 715 VGLSVSDGYIATGSETNEVFV 735
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 392
++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
V+VW + +L H + ++ S D +L ASG D LW +N G + T+
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F VD+ +VS S D T+KLW+
Sbjct: 661 HHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 198
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 199 VVLS-SDGNYALSGSWDKTFV 258
V LS SDG A ++ FV
Sbjct: 715 VGLSVSDGYIATGSETNEVFV 735
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGH 434
+WD+ +GK + + HTK + S+ D +++GS D T ++W+ + C + H
Sbjct: 1006 IWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLA--CH 1061
Query: 435 SDWVSCVRFSP 467
+ V V +SP
Sbjct: 1062 AGPVQSVEYSP 1072
Score = 32.3 bits (70), Expect = 0.33
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 190 ISDVVLSSDGNYALSGSWDKT 252
+S V + S G L+ + D T
Sbjct: 942 VSCVKMLS-GERVLTAAHDGT 961
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 RLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD L + + HT V ++ S D +IVSGS D ++ +W+ + +
Sbjct: 880 KIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDK-QTTQLLEELK 936
Query: 429 GHSDWVSCVR 458
GH VSCV+
Sbjct: 937 GHDSQVSCVK 946
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGH-SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
TVK+W + + + +G S + ++ + A+ G+D A +WD+ GK +H L
Sbjct: 961 TVKMWDVRT-DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL 1018
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 386
++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 VAFSVDNRQIV-SGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 497
+ F+ +NR IV SGS DK +K+W+ +CK T++ H V V ++ N+ +++S
Sbjct: 220 LTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEH--HEKKVHAVAWN-NYTPEVLLSG 276
Query: 498 GWDR 509
DR
Sbjct: 277 SRDR 280
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 605 SLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
++ ASG +D K +WD+ GK T++H++
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHE 257
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.3 bits (80), Expect = 0.020
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN-TLAECK 410
G D R ++A ++ F H + SV++++ +++ GS+D+T+KLW+ + E
Sbjct: 346 GFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPS 405
Query: 411 YTIQDDGHSDWVSCVRFSPNHANPIIVSCG--------WDRLSRSGISLTVSSR 548
+ ++ + + FSP+ NP +++ G WD LS + +S SR
Sbjct: 406 CIATHNPNAGGLFFIAFSPD--NPFLLAMGGVMGELKLWDTLSDTNVSSRYGSR 457
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 141
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 386
++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 259 KVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 190 I 192
+
Sbjct: 69 V 69
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSC 452
G+ ++ H + +V + + ++VSGS D ++KLW + K ++Q GH+D V
Sbjct: 141 GQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRG 195
Query: 453 VRFSPN 470
+ P+
Sbjct: 196 LAVMPD 201
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 190 I 192
+
Sbjct: 69 V 69
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSC 452
G+ ++ H + +V + + ++VSGS D ++KLW + K ++Q GH+D V
Sbjct: 141 GQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRG 195
Query: 453 VRFSPN 470
+ P+
Sbjct: 196 LAVMPD 201
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + + + + AS D A LWD G LH+ +H I+ A F
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAF 110
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHL 673
G TVK W + L + + + ++ P G+ +GG+DM L+D + GK +
Sbjct: 207 GSTVKFWDANHFGL-VKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEI 263
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + + + + AS D A LWD G LH+ +H I+ A F
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAF 110
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + + + + AS D A LWD G LH+ +H I+ A F
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAF 110
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H +V + +S DNR++ SG D + +WN + ++ H+ V + +SP H +
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HSTQPVLKYSEHTAAVKAIAWSP-HVHG 391
Query: 483 IIVSCG 500
++ S G
Sbjct: 392 LLASGG 397
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WD + K TR E H V ++A+ + + SGSRDK+I + + + + GH
Sbjct: 277 QIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRCQEDHVSKLAGH 334
Query: 435 SDWVSCVRFS 464
V +++S
Sbjct: 335 KSEVCGLKWS 344
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 35.9 bits (79), Expect = 0.027
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFS 464
FE ++ + V + SGS DK+I LW T CK+ + GH V C++ S
Sbjct: 312 FETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQAS 370
Query: 465 PNH--ANPIIVSCGWDRLSR 518
PN+ A ++ S G D+ R
Sbjct: 371 PNNVGAGFMLYSGGLDKSLR 390
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDL 655
QT+KVW + K +GH+G + ++ P S L SG +D LWDL
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 392
Q ++WD+ K T HT V S+ N + VSGSRD LW+
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 590 VSPDGSLCASGGKDMKAMLWDLN 658
+SPDG SG D A +W +N
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVN 368
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
GH G + + ++ + AS D A +W+ G LH+ +H I+ A F
Sbjct: 54 GHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAF 105
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S D + S + D+T++LWN
Sbjct: 327 LSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFG 386
Query: 402 E 404
E
Sbjct: 387 E 387
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
LG LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 110 LGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQV 169
Query: 414 TIQDDGHSDWVSCVRFSPNH 473
GH V + ++ NH
Sbjct: 170 RTLRGGHESRVGSLAWN-NH 188
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H +V + +S D+R++ SG D + +WN ++ + ++ H+ V + +SP H +
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ-QPILKLTEHTAAVKAITWSP-HQSS 354
Query: 483 IIVSCG 500
++ S G
Sbjct: 355 LLASGG 360
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKL-KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
LG V +W +N K+ K+ LG + + +V + +GS + G + +WD K +
Sbjct: 192 LGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVR 251
Query: 677 TL 682
T+
Sbjct: 252 TM 253
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ + H ++ + +S DNR++ SG D + +WN + ++ H+ V + +SP+
Sbjct: 287 KLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQ-HSTQPVLRFCEHAAAVKAIAWSPH 345
Query: 471 H 473
H
Sbjct: 346 H 346
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WD+ K R E H V ++A+S + + SGSRDK+I + + + + GH
Sbjct: 234 QIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDHVSKLKGH 291
Query: 435 SDWVSCVRFSPNH 473
+ +++S ++
Sbjct: 292 KSEICGLKWSSDN 304
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPN 470
E H +V SV+++ + + SRDK++ +W L +Y GH+ V V++ P
Sbjct: 115 EGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP- 173
Query: 471 HANPIIVSCGWD 506
++ SC +D
Sbjct: 174 -TMDVLFSCSYD 184
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H+ V S++F+ ++V+ S D T+K+W T + + ++ W+ S H +
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT--DIAKMQSGEEYAPWIHLCTLSGYH-DR 268
Query: 483 IIVSCGWDR 509
I S W R
Sbjct: 269 TIYSAHWSR 277
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSP 467
E HT+ V S A+S + + + S D T +W EC T+ +GH + V V S
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL--EGHENEVKSV--SW 126
Query: 468 NHANPIIVSCGWDR 509
N + + +C D+
Sbjct: 127 NASGSCLATCSRDK 140
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW-----NTLAECKYTI--QDDGHSDWVSCVRF 461
HT+DV V + + S S D TIK+W + +C T+ ++GHS V + F
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF 221
Query: 462 SPNHANPIIVSCGWD 506
N A +V+C D
Sbjct: 222 --NAAGDKMVTCSDD 234
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 459 FSP 467
+ P
Sbjct: 103 WDP 105
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
SPD + SG D ++WD+N G LD
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILD 92
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
++ K+ +L H V + +P ++S S D + I+W + N G + L H
Sbjct: 41 QSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQILDAH 94
Query: 181 SHFISDVVLSSDGNYALSGSWDKT 252
H++ V Y S S D+T
Sbjct: 95 CHYVQGVAWDPLAKYVASLSSDRT 118
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 459 FSP 467
+ P
Sbjct: 162 WDP 164
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
SPD + SG D ++WD+N G LD
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILD 151
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
++ K+ +L H V + +P ++S S D + I+W + N G + L H
Sbjct: 100 QSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQILDAH 153
Query: 181 SHFISDVVLSSDGNYALSGSWDKT 252
H++ V Y S S D+T
Sbjct: 154 CHYVQGVAWDPLAKYVASLSSDRT 177
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 459 FSP 467
+ P
Sbjct: 162 WDP 164
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
SPD + SG D ++WD+N G LD
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILD 151
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
++ K+ +L H V + +P ++S S D + I+W + N G + L H
Sbjct: 100 QSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQILDAH 153
Query: 181 SHFISDVVLSSDGNYALSGSWDKT 252
H++ V Y S S D+T
Sbjct: 154 CHYVQGVAWDPLAKYVASLSSDRT 177
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 237 FLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
F LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 349 FTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
LG LWD ++ T++ +D V S+ ++ D + G + +++W+ ++
Sbjct: 128 LGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHV 187
Query: 414 TIQDDGHSDWVSCVRFSPNH 473
GH V + ++ NH
Sbjct: 188 RTLRGGHESRVGSLAWN-NH 206
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 422
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+ R + + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 93 GESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 318 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 476
+ F+ D + ++SGS D T+ WN + + + + VSC++++P A
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +2
Query: 413 YHPR*WTQRLGVMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTV 592
YH + T R+ + C Y + G++++ + + ++ GH + ++ +
Sbjct: 63 YHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCM 122
Query: 593 SPDGSLCASGGKDMKAMLWDL 655
SP SG D LWDL
Sbjct: 123 SPINDSFMSGSLDRSVRLWDL 143
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 468 NHANPIIVSCGWDRLSR 518
+ IV+ D+ R
Sbjct: 109 FSDDRTIVTSAADKQVR 125
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + + G
Sbjct: 164 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 223
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H V + ++ NH I+ + G D L
Sbjct: 224 HQSRVGSLAWN-NH---ILTTGGMDGL 246
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 458
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 459 FSPNHANPIIVSCG 500
+ P AN + G
Sbjct: 322 WCPFQANLLATGGG 335
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L + F LW + HT VL +A S D + S + D+T++ WN
Sbjct: 374 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Frame = +3
Query: 258 LWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIKLWNT 395
+WD ++ TT+ R E+HT V ++A+ +++ G D+TIK WNT
Sbjct: 292 IWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNT 346
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + + G
Sbjct: 154 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 213
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H V + ++ NH I+ + G D L
Sbjct: 214 HQSRVGSLAWN-NH---ILTTGGMDGL 236
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 458
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 459 FSPNHANPIIVSCG 500
+ P AN + G
Sbjct: 312 WCPFQANLLATGGG 325
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L + F LW + HT VL +A S D + S + D+T++ WN
Sbjct: 364 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Frame = +3
Query: 258 LWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIKLWNT 395
+WD ++ TT+ R E+HT V ++A+ +++ G D+TIK WNT
Sbjct: 282 IWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNT 336
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 389
RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 199 RLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 389
RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 291 RLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 162
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 162
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 126
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 539 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
K +H HS ++N + SPDG+ + D K M++D G + L D
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED 93
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Query: 471 HANPIIVS 494
I VS
Sbjct: 63 GTKFITVS 70
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G L + SPD ++ ASG + +A++WD
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWD 384
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+ H + +V++S D++++++ S DK+ K+W
Sbjct: 93 DGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLWN 392
++DL A + + R HT DV +V F+ ++ I+SGS D K+W+
Sbjct: 255 VYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H + V + D R +S +D+TIKLW+
Sbjct: 317 HLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2659 KTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
GH + + +SPD + +G +D +LW ++
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 126
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +3
Query: 348 QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPNHANP 482
++ SG D T+K+W +C +Q H+DWV V ++PN P
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLP 225
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
HT D+ SV FS D R ++S S D ++K+W+
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 136 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
+EN Y IP + +L GH+ +S + + S G LSGS+D T
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYT 200
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
RL L K R F+ H V+S++ +SGS D+T+ LW+ E C+ ++ G
Sbjct: 103 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG 162
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
RL L K R F+ H V+S++ +SGS D+T+ LW+ E C+ ++ G
Sbjct: 100 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG 159
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LRGH V ++ N ++ + RDK++ +W++ +E++ L GHS + V+
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 205 LSSDGNYALSGSWDKT 252
+ S S+D T
Sbjct: 147 WHPTMDVLFSCSYDNT 162
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
GH + +V+ + GSL A+ G+D +W++
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD----DGHSDWVSCVRFSPN 470
H +V SV+++ + + RDK++ +W E GHS+ V V + P
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHP- 149
Query: 471 HANPIIVSCGWD 506
++ SC +D
Sbjct: 150 -TMDVLFSCSYD 160
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 428
F L KT R H + S+A +D I SGS D ++++W+ + +C T++
Sbjct: 239 FDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMKCVKTLR-- 294
Query: 429 GHSDWV 446
HSDWV
Sbjct: 295 -HSDWV 299
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITAL 709
GH G + ++ + D + SG DM +WD + K + TL H+D + L
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGL 302
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 380
++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 291 KVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 285 TRRFEDHTKD--VLSVAFSVDNRQIVS-GSRDKTIKLW---NTLAECKYTIQDDGHSDWV 446
T + H +D V S+++++ +++ GS DK++KLW N C T Q + + V
Sbjct: 395 TYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGA--V 452
Query: 447 SCVRFSPNHANPIIVSCG 500
+ F+ + NP +++ G
Sbjct: 453 FSISFAVD--NPFLLAIG 468
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ + H V + FS ++ QI++ S+D +I++WN +Y + +D + V + +
Sbjct: 284 QLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYHLDEDPKTLKVFPIPLCDS 341
Query: 471 HANPIIVSCGWDRLS 515
NP+ +DRLS
Sbjct: 342 GGNPL----HYDRLS 352
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
Score = 30.7 bits (66), Expect(2) = 0.27
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 172 YGHSHFISDVVLSSDGNYALSGSWDKTF 255
+ H IS + LS D SGSWDKTF
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTF 235
Score = 20.6 bits (41), Expect(2) = 0.27
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENN 147
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 658
H G + V P+ ++ AS G+D + M+WDLN
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 422
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
GHSG + V G + SG D +WDLN + + TL H +T+L
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 246 DPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSE-- 162
Query: 486 IVSCG 500
IV+ G
Sbjct: 163 IVASG 167
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN-TLAEC 407
++ D G + H + V F + +IV SGS D ++LWN T +EC
Sbjct: 131 KIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSEC 183
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 551 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 712
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 398
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 389
G+D ++WD G FE H V SV +N Q I S + D IK W
Sbjct: 485 GEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 551 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 712
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 398
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 389
G+D ++WD G FE H V SV +N Q I S + D IK W
Sbjct: 485 GEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
+ + GH+G + +++ G ASG D +W++ G+ L ++ I + +
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAW 472
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 470
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 471 HANPII-VSCGWD 506
P++ V+ G D
Sbjct: 476 SRLPVLAVAMGRD 488
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 358 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 417
Query: 402 E 404
E
Sbjct: 418 E 418
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 360 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 419
Query: 402 E 404
E
Sbjct: 420 E 420
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 422
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 658
TV ++ L ++ L H G + V P+ ++ AS G+D + M+WD+N
Sbjct: 285 TVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
+L GH V +I T P P +++++S+D+++ +W +
Sbjct: 123 SLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+ H +N ++SPDG L A G + + ++ D N GK L TL
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETL 315
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD- 428
+++D+ R H+ V + V D +VSG D +K W+ T+ D
Sbjct: 118 QVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGA---TVISDL 174
Query: 429 -GHSDWVSCVRFSP 467
GH D+V C SP
Sbjct: 175 LGHKDYVRCGDCSP 188
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 652
VK W + + + LGH Y+ SP + S+ +G D +WD
Sbjct: 160 VKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+ WD+A H V S V++ +V+GS D T+K+W+ I +
Sbjct: 161 KYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEIN 220
Query: 432 HSDWVSCVRFSPN 470
H V V + P+
Sbjct: 221 HGLPVEDVVYLPS 233
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V +S Q+++GS DKTIK W+
Sbjct: 96 HEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 186
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 187 FISDVVLSSDGNYALSGSWDKTFV 258
++ + L+ DG+ SGS D++ +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSIL 305
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 144
+ +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 316 MAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 470
A +V + I S S DKT+K+W CK +I+ H D V+ + S N
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVSTN 246
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHS 437
H K +LS+ F+V + ++SGS D+T+++W + Y+ + GH+
Sbjct: 325 HDKAILSL-FNVSDL-LLSGSADRTVRIWRRGPDSSYSCLEVLSGHT 369
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H +N + ++ DGS+ SG D ++W+ D
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
>At4g39753.1 68417.m05629 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 390
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 470 SCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 637
SC+P+ LW +K W L +NH SG + TV DG+L K K
Sbjct: 285 SCRPN-SFLWFDNEIKNWRLIKGLSSLNHSCRSGLIETVCY--DGNLLLLWDKPTK 337
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 25 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 129
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
K + E H + + + +++ Q + SRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 138
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
R WD + + R + + +++ S ++ +++G + + LW+ + ++
Sbjct: 112 RSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEES 171
Query: 432 HSDWVSCVRFSPNHANPII 488
H D V+ V F PN N ++
Sbjct: 172 HMDDVTQVHFVPNKPNKLL 190
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
++W +A K H V SV S + SGS D T+K W + KYT
Sbjct: 231 KVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYT 283
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L Y W +T+KVW + + K + H +N+V VS ++ SG
Sbjct: 209 VSCLSLNDEQGLLYSASW-DRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGS 266
Query: 626 KDMKAMLWDLN-DGKHL-HTL 682
D W + GK+ HTL
Sbjct: 267 ADGTVKAWKRDQQGKYTKHTL 287
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-- 159
Query: 486 IVSCG 500
IV+ G
Sbjct: 160 IVASG 164
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 407
++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-- 159
Query: 486 IVSCG 500
IV+ G
Sbjct: 160 IVASG 164
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 407
++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 CKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWDLNDGKHLHTLD 685
C K GH+ ++V P +GG D K +LWD + G+ +D
Sbjct: 138 CLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKIID 188
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H+K V V F VD+ +VS S D T+KLW+
Sbjct: 703 HSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 192
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 193 SDVVLS-SDGNYALSGSWDKTFV 258
+ V LS SDG A ++ FV
Sbjct: 755 NFVGLSVSDGYIATGSETNEVFV 777
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 377
++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 609 QIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 545 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITAL 709
K + H ++++ +S DGSL S D +W +D K L +++ H+D I A+
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAI 241
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 198
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 199 VVLS---SDGN 222
+ +S SD N
Sbjct: 379 LAVSVSDSDSN 389
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 178 HSHFISDVVLSSDGNYALSGSWDKTF 255
H +S + LS DG+ S SWD++F
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSF 216
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 512 VKVWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LN-DGKHLH 676
+KVW+ + K L H +N + +S DG + SG D ++W+ +N D + LH
Sbjct: 258 IKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELH 317
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 8/40 (20%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQ--------IVSGSRDKTIKLWN 392
E HTK V S+A SV + + SGS D ++K+WN
Sbjct: 370 EGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWN 409
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 470
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSEN 219
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Frame = +2
Query: 506 QTVKVWHLT----NCKLKINHL------GHSGYLNTVTVS-PDGSLCASGGKDMKAMLWD 652
Q +KVW N K K H H+ +N + +S +GSL SGG D ++W+
Sbjct: 229 QRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE 288
Query: 653 LNDG 664
+DG
Sbjct: 289 RDDG 292
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 205 LSSDGNYALSGSWDKT 252
+ SD SGS DKT
Sbjct: 313 VVSD--ILCSGSADKT 326
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCV 455
HT+ VL +A D + SGS DKT++LW A + +GH V C+
Sbjct: 304 HTESVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCL 353
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
G LRGH V +A D++ S S DKT+ +WK
Sbjct: 299 GMLRGHTESVLCLAV---VSDILCSGSADKTVRLWK 331
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 270 TVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 318 LSVAFSVDNRQIVSGSRDKTIKLWN 392
LSV +S D ++I SGS D I+ W+
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWD 226
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 587 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDI--ITALCF 715
TV+ G ASGG D L+DL L + LDHN ITAL F
Sbjct: 46 TVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSF 91
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
T+K W L + L GH ++T+ V + SG D LW L+D L L
Sbjct: 608 TIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 330 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 422
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
H+ + VS DG A+GG D LWD+ +H+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHV 241
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
F H V S+ F ++ SGS D T+ +WN
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 177
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +3
Query: 267 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH---- 434
L++ K + E H + + +AFS +VS D + LW+T + K T ++
Sbjct: 498 LSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCN 557
Query: 435 ------SDWVSCVRFSPNHANPIIVSCGW 503
+ V+ ++F P ++V GW
Sbjct: 558 RSNLESTSLVTHIQFDPYQIELLVVHDGW 586
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+N ++SPDG L G + +++L D N GK L TL
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATL 313
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 97 KMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +1
Query: 46 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 225
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 226 ALSGSWDK 249
SG DK
Sbjct: 87 VFSGGCDK 94
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 694
+N +VSPDG L A G + ++ D + GK + +L H D
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKD 291
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
GH Y P+G + A+G +D LWD+ +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRN 321
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD A G FE H V SV + + + I S + D IK W + D
Sbjct: 489 KVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYD 547
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSRSGI 527
W + + +S + + SCG + S I
Sbjct: 548 APGRWCTTMAYSADGTR--LFSCGTSKDGESFI 578
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKEN 519
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 902 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD A G FE H V SV + + + I S + D IK W + D
Sbjct: 489 KVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYD 547
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSRSGI 527
W + + +S + + SCG + S I
Sbjct: 548 APGRWCTTMAYSADGTR--LFSCGTSKDGESFI 578
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKEN 519
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 902 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG-KDMKAMLWDL 655
GQT ++ N +L G G + V S DG+ +GG KD + WD+
Sbjct: 234 GQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +T+KVW L++ K + H +NTV D L +G
Sbjct: 252 VSCLSLNEELGLLYSGSW-DKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGS 309
Query: 626 KDMKAMLW 649
D +W
Sbjct: 310 ADGTLKVW 317
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/83 (27%), Positives = 30/83 (36%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ RG GH V +A +P S D LI+W N +K
Sbjct: 281 TVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADL 340
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
H + D N L+GS D T
Sbjct: 341 HCVD--WNPHDDNLILTGSADNT 361
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +3
Query: 258 LWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
LWD G T+ + H D+ V ++ D+ I++GS D T++L++ +
Sbjct: 319 LWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSP 378
Query: 426 ----DGHSDWVSCVRFSPNHAN 479
+GH V CV++SP+ ++
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSS 400
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +T+KVW L++ K + H +NTV VS L +G
Sbjct: 248 VSCLSLNEDLGLLYSGSW-DKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGS 305
Query: 626 KDMKAMLW 649
D +W
Sbjct: 306 ADGTLKVW 313
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 270 KVWRLSDSKCLESIEAHDDAVNTVVSGFDDL-VFTGSADGTLKVW 313
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 548 INHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKH 670
+ H G H + + ++ GSL SGG D +W N DG H
Sbjct: 367 LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSH 410
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 670
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +3
Query: 252 FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
F +W +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 384 FGMW---SGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +1
Query: 46 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 225
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 226 ALSGSWDK 249
+G DK
Sbjct: 88 VFTGGCDK 95
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 315
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D L D + G+T + H + A+ + +G++DKT ++W+T +
Sbjct: 300 DGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 359
Query: 429 GHSDWVSCVRFS 464
G+ V +RF+
Sbjct: 360 GNLGAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 309
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D L D + G+T + H + A+ + +G++DKT ++W+T +
Sbjct: 294 DGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 353
Query: 429 GHSDWVSCVRFS 464
G+ V +RF+
Sbjct: 354 GNLGAVRSIRFT 365
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 237 FLGQDFRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
F R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 870 FSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCF 715
GH Y + P+G + A+G +D LWD+ N + L L N I AL F
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRF 370
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L D +GK E H S A+ + + + +G++D T +LW+
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWD 347
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +TVKVW + + K + H +N+VT + SL +G
Sbjct: 138 VSCLSLAEDQGLLYSASW-DRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGS 194
Query: 626 KDMKAMLW 649
D +W
Sbjct: 195 ADGTVKVW 202
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 530 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDII-T 703
T K I L +G + ++ S DG S G D + +WDL K L+ +D T
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 421
Query: 704 ALC 712
+LC
Sbjct: 422 SLC 424
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
H N V+ SPD L AS +D LW L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 647 WDLNDGKHLHTLDHNDIIT 703
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 647 WDLNDGKHLHTLDHNDIIT 703
WDLN K L TL+H +I+T
Sbjct: 654 WDLNTVKELETLEHLEILT 672
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 100 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 186
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 488
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 187 FISDVVLSSDGNYALSGSWDKTFVCGISLQAR 282
++SDV++S +G + G W T C ++ R
Sbjct: 24 WLSDVLISQNGTFRFRGPWFSTLNCVVTCDPR 55
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
++W +A K H + SV D+ + +GS D T+K+W + K T
Sbjct: 260 KVWRIADSKCLESIHAHDDAINSVMSGFDDL-VFTGSADGTVKVWKRELQGKGT 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
H V S++ V+ + S S D TIK+W +A+ K H D ++ V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWR-IADSKCLESIHAHDDAINSV 283
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQKRL 171
L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P +
Sbjct: 3314 LRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVV 3372
Query: 172 Y 174
Y
Sbjct: 3373 Y 3373
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 306 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 VAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQD 425
V V ++ SGS DKTIK+W+ +C T+ D
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTD 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+ + H K V +A + ++ +GS+D+T+++W+
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 422
GQ ++WDL ++ + HT + V ++ + + S S + + N + + T
Sbjct: 114 GQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATEL 173
Query: 423 DDGHSDWVSCVRFSPNHANPIIVSCGWD 506
D + + + +S + ++V+ G D
Sbjct: 174 KDPNGQVLRLLDYS-RSSRHLLVTAGDD 200
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 891 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 891 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 563 HSGYLNTVT-VSPDGSLCA-SGGKDMKAMLWDLNDGKHLHTLDHNDIITALC 712
H G +N + +P+ LC + G D +WD++ KH H+ + ++C
Sbjct: 451 HVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSIC 502
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
RS N+ F+ PD K P+ +T +F
Sbjct: 93 RSKNVLFVISKPDVFKSPNSETYVIF 118
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 67 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 162
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At1g71310.3 68414.m08231 expressed protein
Length = 165
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 521 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 607
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.2 68414.m08230 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 521 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 607
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.1 68414.m08229 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 521 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 607
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
R+ N+ F+ PD +K P+ +T +F
Sbjct: 90 RAKNVLFVISKPDVYKSPNAETYVIF 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,918
Number of Sequences: 28952
Number of extensions: 390104
Number of successful extensions: 2369
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2302
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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