Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30609
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81486-9|CAB03991.1|  430|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AC024214-13|AAM97984.1|  296|Caenorhabditis elegans Collagen pro...    29   4.9  
U40417-6|AAA81415.2|   90|Caenorhabditis elegans Saposin-like pr...    28   8.6  

>Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical
           protein Y69H2.2 protein.
          Length = 907

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 554 DHLKLGTPSYKYKIEKTTFDLKNLFNGNKELADTTLQFAN--ENWQQLLDDL 703
           D++K+GT   KYK +K T D  N +   K   D TL++      W  + +D+
Sbjct: 202 DYVKIGTHQTKYKDDKMTSDKCNEYAQEKSTDDKTLKYLTLCGEWCMVSEDM 253


>Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +3

Query: 243 SFD*PVHLDDINIDGNGLKLTFTKALMHGLKGSHLKEFKLKFDGDHGN 386
           SF   + +++++++G   +L F + LM  L   +LK  K+ F GDH N
Sbjct: 334 SFKTKMAIENLDLEGKS-ELEFIE-LMRYLDEKNLKRLKISFSGDHDN 379


>Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +3

Query: 243 SFD*PVHLDDINIDGNGLKLTFTKALMHGLKGSHLKEFKLKFDGDHGN 386
           SF   + +++++++G   +L F + LM  L   +LK  K+ F GDH N
Sbjct: 334 SFKTKMAIENLDLEGKS-ELEFIE-LMRYLDEKNLKRLKISFSGDHDN 379


>Z81486-9|CAB03991.1|  430|Caenorhabditis elegans Hypothetical
           protein C53A5.11 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 270 HPDALVSRRNVQFRNTLRKLRQTLLYLFFDALFEVFIGE 154
           HP A+  R   QFRNT   L QTL   F    FE++ G+
Sbjct: 81  HPKAIEMRN--QFRNTTENLIQTLQMFFGILSFELYEGK 117


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 361 SLNSFR*LPFKPCINALVNVSFNPLPSMLMSSRCTGQS 248
           S  SF  LP+   I+ L    +N L  M+M+S C  Q+
Sbjct: 115 SYGSFGKLPYDAVIHILTRTPYNLLSRMVMTSSCWNQT 152


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 361 SLNSFR*LPFKPCINALVNVSFNPLPSMLMSSRCTGQS 248
           S  SF  LP+   I+ L    +N L  M+M+S C  Q+
Sbjct: 115 SYGSFGKLPYDAVIHILTRTPYNLLSRMVMTSSCWNQT 152


>AC024214-13|AAM97984.1|  296|Caenorhabditis elegans Collagen
           protein 106 protein.
          Length = 296

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 611 DLKNLFNGNKELADTTLQFANENWQQLL-DDLAPPAIKQIVKTVVKAINK 757
           D+  L+N   E + TT + A++ W++LL  + AP A +  V  ++   NK
Sbjct: 29  DINGLYNDVMEESRTTREVADDAWEELLRKNGAPEASRAAVTAMLFGRNK 78


>U40417-6|AAA81415.2|   90|Caenorhabditis elegans Saposin-like
           protein family protein6 protein.
          Length = 90

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 563 KLGTPSYKYKIEKTTFDLKNLFNGNKELADTTLQFANENWQQLLDDLAPPAIKQI 727
           KL   S     +K T D+K  F+   + A  ++QFA    +  +D    P IK++
Sbjct: 19  KLAVKSADGDADKDTNDIKKDFDAKCKKAFHSIQFAPRECEHYVDKKLDPIIKEL 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,177,164
Number of Sequences: 27780
Number of extensions: 361828
Number of successful extensions: 1099
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)