BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30609 (780 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 42 5e-06 AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 24 1.8 DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.4 >AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier protein JHBP-1 protein. Length = 253 Score = 42.3 bits (95), Expect = 5e-06 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = +2 Query: 539 DNNGKDHLKLGTPSYKYKIEKTTFDLKNLFNGNKELADTTLQFANENWQQLLDDL 703 + NG+ +L++ + K+ K +NLF+GNKEL + +F NEN + L +L Sbjct: 167 EKNGETYLRIKKHAVKFNPAKVKLRFENLFDGNKELGEQMNRFINENSELLFKEL 221 Score = 27.9 bits (59), Expect = 0.11 Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Frame = +3 Query: 255 PVHLDDINI-DGNG---LKLTFTKALMHGL-KGSHLKEFKLKFDGDHGNFKLAFISNMSL 419 P+ +D + I + G L+ + ++GL K +K + + +D + + ++ + Sbjct: 69 PLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNLEIKNYNIDWDKCILSSE-SYNPQVDF 127 Query: 420 TAEYEADGKLLILQIKGKGDALI 488 A+Y+ +GK+L+L ++G G + I Sbjct: 128 VADYKIEGKVLLLPVRGAGKSNI 150 >AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. Length = 366 Score = 23.8 bits (49), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 296 QPVAVDVNVIQMHWSVEGTSSSGIPFVNSGRLFSICSLMHCSRFS 162 QPV++ IQ + ++ SSGIP +S + S H RFS Sbjct: 8 QPVSLQTQRIQGLYLLDNNDSSGIP--HSAESSASNSPDHYERFS 50 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 23.4 bits (48), Expect = 2.4 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -1 Query: 750 IALTTVLTICLIAGGARSS 694 + +TTVLT+ I+ G RSS Sbjct: 276 LGITTVLTMTTISTGVRSS 294 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 202,857 Number of Sequences: 438 Number of extensions: 4153 Number of successful extensions: 8 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24518154 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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