Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30608
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 104 1e-23
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 95 9e-21
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 66 5e-12
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 66 7e-12
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 64 2e-11
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 61 1e-10
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 60 3e-10
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 60 4e-10
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 57 2e-09
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 56 7e-09
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 54 2e-08
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 50 5e-07
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 48 1e-06
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 3.7
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 26 4.9
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 4.9
SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subuni... 26 4.9
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 26 6.4
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.4
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 104 bits (250), Expect = 1e-23
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DTLY+GG+F A + FP DYP PP ++F T++WHPNV+ NG++CISILHPP DD E
Sbjct: 47 DTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYED 106
Query: 690 PCERWNPTQSVRTVLL 737
ERW P S T+L+
Sbjct: 107 AGERWLPVHSPETILI 122
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +1
Query: 373 VPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
+P+S++ + L + K +Q+ P +GF V L+ + ++FEWEV I GP
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGP 45
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 95.1 bits (226), Expect = 9e-21
Identities = 39/75 (52%), Positives = 53/75 (70%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELP 692
T ++GG + A +KFP DYP PP+++F + +HPNVY++G +CISILH P DDP E
Sbjct: 48 TPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESS 107
Query: 693 CERWNPTQSVRTVLL 737
ERW+P QSV +LL
Sbjct: 108 SERWSPVQSVEKILL 122
Score = 34.7 bits (76), Expect = 0.014
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
ALR L EYK L E +G ED+ F W+ I GP
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGP 45
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 66.1 bits (154), Expect = 5e-12
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
+DT Y+G FK M FP +YPYSPP+I F + +WHPNV +G++C+ IL
Sbjct: 69 SDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL 117
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 65.7 bits (153), Expect = 7e-12
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 498 LRTADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDP 674
L +D++Y GG F +KFP DYP+ PP+I F T+++HPN G++C++IL V P
Sbjct: 44 LGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKP 102
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 361 MSNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
M++ P+SS R L EY L+E P+ RV L+ +DNLF W GP
Sbjct: 1 MASASPSSS--RRLTKEYSDLREHPIPDIRVNLV-DDNLFHWACTALGP 46
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 64.5 bits (150), Expect = 2e-11
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
AD+ Y GG F + FP DYP+ PP + F T+++HPN+ NG +C+ IL
Sbjct: 41 ADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDIL 89
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
AL+ + E L ++P +G+D LF W+ I GP
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDD-LFHWQATIMGP 40
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 61.3 bits (142), Expect = 1e-10
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
ADT ++ G FK + F YP PP ++F++ ++HPNVY NG+LC+ IL
Sbjct: 44 ADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQ---------- 93
Query: 687 LPCERWNPTQSVRTVL 734
RW+PT V +L
Sbjct: 94 ---NRWSPTYDVAAIL 106
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y+GG F + P +YP PP++RFLTK++HPNV + G +C+S L +
Sbjct: 46 YEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLK-------------K 92
Query: 699 RWNPTQSVRTVLL 737
W+P +RTVLL
Sbjct: 93 DWSPALQIRTVLL 105
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 59.7 bits (138), Expect = 4e-10
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELP 692
T ++GG +K M FP +YP PP RF ++HPNVY +G +C+SIL+
Sbjct: 51 TSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEE---------- 100
Query: 693 CERWNPTQSVRTVLL 737
E W P +++ +LL
Sbjct: 101 -EGWKPAITIKQILL 114
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 57.2 bits (132), Expect = 2e-09
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLCISIL 653
T Y+GGYF ++ P DYP+ PP + F TK++HPNV + G +C+ IL
Sbjct: 46 TPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDIL 93
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 55.6 bits (128), Expect = 7e-09
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 656
++T Y GG +K H++ P +YP+ PSI F+ +++HPN+ E +G +C+ +++
Sbjct: 40 SETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVIN 90
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 54.0 bits (124), Expect = 2e-08
Identities = 19/52 (36%), Positives = 35/52 (67%)
Frame = +3
Query: 498 LRTADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
+R + Y+GG FK ++ +YP+ PP ++ L K++HPN+ G++C++IL
Sbjct: 58 IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL 109
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 49.6 bits (113), Expect = 5e-07
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLCISIL 653
+T Y+GG + + YP SPPS+ F TK+ HPN+ + NG++C+ IL
Sbjct: 46 ETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDIL 94
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 48.0 bits (109), Expect = 1e-06
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSG 683
DT Y+GG + + FPPDYP+ PP+IR +T N LC+S HP
Sbjct: 46 DTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHP-------- 95
Query: 684 ELPCERWNPTQSVRTVLL 737
+ WNP+ V T+L+
Sbjct: 96 ----KSWNPSWMVSTILV 109
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 361 MSNTVPTS-SALRALALEYKSLQEEPVEGFR 450
M ++VP + ++L E+ +L E+P+EGFR
Sbjct: 22 MFHSVPQNKNSLSVCVAEFTALSEKPLEGFR 52
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 509 RGPKIATSHSNRLSSPSN--LTRKPST 435
+GP+ TS SN +SP+N T KPST
Sbjct: 229 KGPRPTTSASNTNTSPANGAPTNKPST 255
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 135 LKSRRNNRPKAHDQLNNNEKAKHRSTKRNPKKISYVRATAAD 10
L++R +A Q +N++ + K+ KK+ +RAT D
Sbjct: 113 LEARLKGDKEARGQNSNDQPEESDDKKKRKKKVKEIRATRLD 154
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 503 PKIATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKA 396
P + S +R SS +LTR+PS S L N +A
Sbjct: 90 PYLKGSFDDRFSSTHSLTRQPSPRSPLTPLKGNTRA 125
>SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subunit
3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 90
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 187 YLWMLQYRCYVYQNF*FVVIVTSEMPGGYVDSIKSSK 297
YL++L + Y+ + V T++ P YVD +K K
Sbjct: 39 YLFILAFGSYLGITLLYNVATTNDKPEAYVDLVKDIK 75
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 577 HHPLGF*LKSGIQMYMKTEIFAYRFSTRPW 666
H LG GIQ ++ E++ + S PW
Sbjct: 401 HRVLGIIFHGGIQPSLRKEVWPFLLSVYPW 430
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 579 PSIRFLTKVWHPNVYENGDLCISI 650
PS+ LTKV HP + G++ + I
Sbjct: 395 PSVSLLTKVLHPKYHLIGNVAVQI 418
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,245,384
Number of Sequences: 5004
Number of extensions: 71400
Number of successful extensions: 194
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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