Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30608
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 153 1e-37
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 103 1e-22
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 95 5e-20
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 64 1e-10
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 63 2e-10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 63 2e-10
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 60 1e-09
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 60 1e-09
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 60 2e-09
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 58 9e-09
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 57 1e-08
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 57 1e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 54 8e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 52 6e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 52 6e-07
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 49 4e-06
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 42 6e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 42 6e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 41 8e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 40 0.002
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 38 0.006
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 34 0.091
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 31 1.1
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.5
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 29 4.5
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 6.0
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 153 bits (371), Expect = 1e-37
Identities = 63/75 (84%), Positives = 70/75 (93%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELP 692
TLYQGGYFKA ++FP +YPYSPPS++F TKVWHPNVYENGDLCISILH P+DDPQSGEL
Sbjct: 52 TLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELA 111
Query: 693 CERWNPTQSVRTVLL 737
CERWNPTQSVRT+LL
Sbjct: 112 CERWNPTQSVRTILL 126
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 364 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
S +S ALRAL +E K+LQ +PVEGF + + EDNLF W V I+GP
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTID-VNEDNLFVWTVGIYGP 49
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 103 bits (247), Expect = 1e-22
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DTLY+GG+FKA + FP DYP PP ++F++++WHPN+ + G++CISILH P DD E
Sbjct: 45 DTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYER 104
Query: 690 PCERWNPTQSVRTVLL 737
P ERW P +V T+LL
Sbjct: 105 PEERWLPVHTVETILL 120
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 400 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
L + ++ PV+GF L+ ++++++WEV + GP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGP 43
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 95.1 bits (226), Expect = 5e-20
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
+T + G F A + FP DYP SPP +RF ++HPN+Y +G +CISILH P DDP EL
Sbjct: 46 ETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYEL 105
Query: 690 PCERWNPTQSVRTVLL 737
ERW+P QS+ +LL
Sbjct: 106 SNERWSPVQSIEKILL 121
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
AL+ L EYK L P EG + EDN FEWE I GP
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGP 44
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = +3
Query: 492 GNLR-TADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLCISIL 653
G++R DT Y GG F +K P YP+SPP+++F TK+WHPNV + G +C+ IL
Sbjct: 41 GHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL 96
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 516 LYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPC 695
+Y+GG F+ + PP+Y PP ++ LTKVWHPN+ E+G +C+SIL + L
Sbjct: 71 IYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSIL-------RQNSLDQ 123
Query: 696 ERWNPTQSVRTVL 734
W PT+++ V+
Sbjct: 124 YGWRPTRNLTDVV 136
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 62.9 bits (146), Expect = 2e-10
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
YQGG F + FP DYP+ PP + F T+++HPN+ NG +C+ IL
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 62.9 bits (146), Expect = 2e-10
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
YQGG F + FP DYP+ PP + F T+++HPN+ NG +C+ IL
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
+T ++ G FK ++F +YP PP+++F++K++HPNVY +G +C+ IL
Sbjct: 45 ETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----------- 93
Query: 690 PCERWNPTQSVRTVL 734
RW+PT V +L
Sbjct: 94 --NRWSPTYDVAAIL 106
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 379 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPR 510
T+ + R L ++K LQE+P G EDN+ WE IFGP+
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQ 44
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
+T ++ G FK ++F +YP PP+++F++K++HPNVY +G +C+ IL
Sbjct: 45 ETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----------- 93
Query: 690 PCERWNPTQSVRTVL 734
RW+PT V +L
Sbjct: 94 --NRWSPTYDVAAIL 106
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 379 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPR 510
T+ + R L ++K LQE+P G EDN+ WE IFGP+
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQ 44
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
D+ + GG FK + P +YP + P +RF+TK++HPN+ + G +C+ IL
Sbjct: 45 DSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILK----------- 93
Query: 690 PCERWNPTQSVRTVLL 737
++W+P +RTVLL
Sbjct: 94 --DKWSPALQIRTVLL 107
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 57.6 bits (133), Expect = 9e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
Y G FK + FP DYP+ PP + F TK++HPNV E G C+ I+
Sbjct: 46 YNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV 90
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 56.8 bits (131), Expect = 1e-08
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT+++GG ++ M F D+P +PP +F ++HPNVY +G +C+S+L
Sbjct: 50 DTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 56.8 bits (131), Expect = 1e-08
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT+++GG ++ M F D+P +PP +F ++HPNVY +G +C+S+L
Sbjct: 50 DTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK-----VWHPNVYENGDLCISILHPPVDDP 674
DT Y G F+ + FP YP+SPP FLT ++PN+Y +G +C+SIL P
Sbjct: 454 DTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRP 513
Query: 675 QSGELPCERWNPTQSVRTVLL 737
+ E+WNP S+ VL+
Sbjct: 514 E------EKWNPYCSLMQVLV 528
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 51.6 bits (118), Expect = 6e-07
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCI 644
+T Y+GG F+ +K YP+ P+++F+TK+WHP+V +G +C+
Sbjct: 390 ETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 656
DT Y+ G ++ + P YP+ PSI FL K++HPN+ E +G +C+ +++
Sbjct: 44 DTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFL--TKVWHPNVYENGDLCISIL 653
TLY G F F P YP++ P + F+ T HP++Y NG +C+SIL
Sbjct: 48 TLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL 96
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSI---------------RFLTKVWHPNV-YENGDLCI 644
T Y GG F+ + P YP+ PP + +F+T++WHPN+ + G +C+
Sbjct: 63 TPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICL 122
Query: 645 SILHPPVDDPQSGELPCERWNPTQSVRTVLL 737
IL ++W + ++RTVLL
Sbjct: 123 DILK-------------DKWTASLTLRTVLL 140
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/78 (35%), Positives = 39/78 (50%)
Frame = +3
Query: 504 TADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSG 683
T T ++GG + + FP DYP PP++ LT + N +C+SI SG
Sbjct: 48 TLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI---------SG 96
Query: 684 ELPCERWNPTQSVRTVLL 737
P E W P+ S+RT LL
Sbjct: 97 YHP-ETWLPSWSIRTALL 113
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSGE 686
T Y+GG + + FP D+P+ PP+I LT + N LC+SI HP
Sbjct: 50 TPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHP--------- 98
Query: 687 LPCERWNPTQSVRTVL 734
+ WNP +V T++
Sbjct: 99 ---DTWNPAWTVSTII 111
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWH 611
ADT Y+ G F+ + FP +YP + P I+F T +W+
Sbjct: 39 ADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 379 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFG 504
+SSA+R L +Y L ++PV+G + L EDN+ EW + G
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRG 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSG 683
DT + GGY+ + F ++P+SPP+I +T + N LC+SI HP
Sbjct: 60 DTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHP-------- 109
Query: 684 ELPCERWNPTQSVRTVLL 737
E WNP +V +L+
Sbjct: 110 ----ESWNPGWTVSAILI 123
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 516 LYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV 620
LY+ F + +YP+ PP ++F V+HPNV
Sbjct: 56 LYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNV 90
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
++GG ++ + F +P PP F T + HPNV G + + +L
Sbjct: 83 WEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 497 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELV 378
+ +SN + SP+N +TG+SC +L+S+ K A V
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSDKKGNDARRV 51
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
T Y+ + ++ +YP PP++RF TKV
Sbjct: 51 TPYESRIYNLQIQCGGNYPREPPTVRFTTKV 81
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 492 GNLRTADTLYQGGYFKAHMKFPPDYPYSPP 581
G+++T +TL GG +H + P+YP PP
Sbjct: 34 GDMKTLETLDDGGSTSSH-QTSPEYPSPPP 62
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 492 GNLRTADTLYQGGYFKAHMKFPPDYPYSPP 581
G+++T +TL GG +H + P+YP PP
Sbjct: 34 GDMKTLETLDDGGSTSSH-QTSPEYPSPPP 62
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 528 GYFKAHMKFPPDYPYSPP 581
GY+ +PP YPY PP
Sbjct: 297 GYYPPGYPYPPGYPYPPP 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,071,145
Number of Sequences: 27780
Number of extensions: 406358
Number of successful extensions: 1054
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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