Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30608
(737 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 111 5e-25
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 111 5e-25
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 110 8e-25
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 69 4e-12
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 68 6e-12
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 68 6e-12
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 68 6e-12
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 68 6e-12
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 68 8e-12
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 68 8e-12
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 68 8e-12
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 67 1e-11
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 66 2e-11
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 66 2e-11
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 66 2e-11
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 63 2e-10
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 63 2e-10
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 63 2e-10
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 62 4e-10
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 61 9e-10
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 61 9e-10
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 60 2e-09
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 60 2e-09
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 59 3e-09
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 59 3e-09
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 57 1e-08
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 55 4e-08
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 54 1e-07
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 53 2e-07
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 50 2e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 46 3e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 45 6e-05
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 44 1e-04
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 44 1e-04
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 43 2e-04
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 43 2e-04
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 43 2e-04
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 43 2e-04
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 42 6e-04
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 40 0.002
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 38 0.007
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 35 0.049
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 33 0.26
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 33 0.26
At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive eff... 30 1.8
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 29 3.2
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 29 4.3
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 29 4.3
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 28 5.6
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 28 5.6
At5g28780.1 68418.m03538 hypothetical protein various predicted ... 28 7.4
At5g19480.1 68418.m02321 expressed protein 27 9.8
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 27 9.8
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 111 bits (267), Expect = 5e-25
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DTLY+GG+F A M FP +YP SPP++RF + +WHPNVY +G +CISILHPP DDP EL
Sbjct: 78 DTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYEL 137
Query: 690 PCERWNPTQSVRTVLL 737
ERW P +V +++L
Sbjct: 138 ASERWTPVHTVESIML 153
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 111 bits (267), Expect = 5e-25
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DTLY+GG+F A M FP +YP SPP++RF + +WHPNVY +G +CISILHPP DDP EL
Sbjct: 46 DTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYEL 105
Query: 690 PCERWNPTQSVRTVLL 737
ERW P +V +++L
Sbjct: 106 ASERWTPVHTVESIML 121
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 382 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
S A L + K L + PV+GF L+ E N+FEW V I GP
Sbjct: 3 SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGP 44
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 110 bits (265), Expect = 8e-25
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DTLY+GG+F A M FP +YP SPP++ F +++WHPNVY +G +CISILHPP DDP EL
Sbjct: 47 DTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYEL 106
Query: 690 PCERWNPTQSVRTVLL 737
ERW P +V +++L
Sbjct: 107 ASERWTPVHTVESIVL 122
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 400 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
L + K L ++PV+GF L+ E N+F+W V+I GP
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGP 45
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
+D+ Y GG F + FPPDYP+ PP + F TKV+HPNV NG +C+ IL
Sbjct: 41 SDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
AD+ + GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 ADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P +V VLL
Sbjct: 91 ---EQWSPALTVSKVLL 104
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
AD+ + GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 ADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P +V VLL
Sbjct: 91 ---EQWSPALTVSKVLL 104
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
+D+ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 71 SDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 120
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 121 ---EQWSPALTISKVLL 134
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 70
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
+D+ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 SDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
A++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 42 AESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 91
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 92 ---EQWSPALTISKVLL 105
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
A++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 AESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
A++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 AESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 67.3 bits (157), Expect = 1e-11
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
A++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 AESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL 89
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL E
Sbjct: 45 YAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILK-------------E 91
Query: 699 RWNPTQSVRTVLL 737
+W+P ++ VLL
Sbjct: 92 QWSPALTISKVLL 104
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAED-MFHWQATIMGP 40
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 66.5 bits (155), Expect = 2e-11
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
Y GG F ++ FPPDYP+ PP + F TKV+HPN+ NG++C+ IL
Sbjct: 45 YSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL 89
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A R + E K LQ +P GED +F W+ I GP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGED-MFHWQATIMGP 40
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
+++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 SESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGE 686
+++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+ IL
Sbjct: 41 SESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---------- 90
Query: 687 LPCERWNPTQSVRTVLL 737
E+W+P ++ VLL
Sbjct: 91 ---EQWSPALTISKVLL 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + + E K LQ++P + ED +F W+ I GP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGP 40
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 63.3 bits (147), Expect = 2e-10
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+ IL
Sbjct: 45 DTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 63.3 bits (147), Expect = 2e-10
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+ IL
Sbjct: 45 DTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 63.3 bits (147), Expect = 2e-10
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+ IL
Sbjct: 45 DTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y+GG FK + P +YP + P +RFLTK++HPN+ + G +C+ IL +
Sbjct: 49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-------------D 95
Query: 699 RWNPTQSVRTVLL 737
+W+P +RTVLL
Sbjct: 96 KWSPALQIRTVLL 108
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y+GG FK + P +YP + P +RFLTK++HPN+ + G +C+ IL +
Sbjct: 49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-------------D 95
Query: 699 RWNPTQSVRTVLL 737
+W+P +RTVLL
Sbjct: 96 KWSPALQIRTVLL 108
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 62.1 bits (144), Expect = 4e-10
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
T Y+GG F +KFP DYP+ PP F T ++HPN+ + G +C++IL
Sbjct: 49 TPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL 95
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y+GG FK + P +YP + P +RFLTK++HPN+ + G +C+ IL +
Sbjct: 49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-------------D 95
Query: 699 RWNPTQSVRTVLL 737
+W+P +RTVLL
Sbjct: 96 KWSPALQIRTVLL 108
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 698
Y+GG FK + P +YP + P +RFLTK++HPN+ + G +C+ IL +
Sbjct: 16 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-------------D 62
Query: 699 RWNPTQSVRTVLL 737
+W+P +RTVLL
Sbjct: 63 KWSPALQIRTVLL 75
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 60.9 bits (141), Expect = 9e-10
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
DT + GG FK + F DYP PP +RF+++++HPN+Y +G +C+ IL
Sbjct: 45 DTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL 92
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 656
D+LYQGG +K ++ P YPY PS+ F+TK++HPNV E +G +C+ +++
Sbjct: 41 DSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVIN 90
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLCISIL 653
++T Y+GG F+ P YP PP +RFLTK++HPNV ++ G++C+ IL
Sbjct: 45 SETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL 94
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
D+ Y GG F + F DYP+ PP + F TKV+HPN+ G +C+ IL
Sbjct: 43 DSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDIL 90
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A + ++ E + +Q P + E+++F W+ I GP
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGP 41
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DT+Y G F ++ P YP+ PP + F T ++HPN+ +G +C+ IL+ P
Sbjct: 56 DTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP--------- 106
Query: 690 PCERWNPTQSVRTVL 734
P W P+ ++ TVL
Sbjct: 107 PKGAWQPSLNISTVL 121
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 58.8 bits (136), Expect = 3e-09
Identities = 21/50 (42%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 656
D++Y+GG +K ++ P YPY PS+ F+TK++HPNV E +G +C+ +++
Sbjct: 41 DSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVIN 90
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLCISIL 653
T Y+GG F+ + P YP+ PP ++F TKVWHPN+ ++G +C+ IL
Sbjct: 45 TPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDIL 92
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 656
D+LYQGG +K ++ P YPY PS+ F+ K++HPNV E +G +C+ +++
Sbjct: 41 DSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN 90
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 507 ADTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILH 656
A T ++GG+F M F DYP PP +F +HPNVY +G +C+SIL+
Sbjct: 50 AGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN 99
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
Y+ G F + PP YPY PP I F TK++HPN+ E G++ + IL
Sbjct: 74 YEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDIL 118
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
T Y+ G F+ + D+P+SPP F+TK++HPNV NG++C++ L
Sbjct: 52 TPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL 98
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 364 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGED 471
SN + ++ LA E KSL E P +G +V + ED
Sbjct: 3 SNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDED 38
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DT+++G ++ + F DYP+ PP ++F T +HPNV G++C+ IL
Sbjct: 76 DTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQ----------- 124
Query: 690 PCERWNPTQSVRTVLL 737
++W+ VRT+LL
Sbjct: 125 --DKWSSAYDVRTILL 138
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
T Y+GG F + FP DYP+ PP + F T+++H NV GDL ++IL
Sbjct: 78 TPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNIL 124
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGEL 689
DT+++G ++ + F DYP+ P ++F T +HPNV G++C+ IL
Sbjct: 77 DTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQ----------- 125
Query: 690 PCERWNPTQSVRTVLL 737
++W+ VRT+LL
Sbjct: 126 --DKWSSAYDVRTILL 139
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISILH 656
T YQ G F P DYP PPS + + W +PN+YE G +C+S+L+
Sbjct: 892 TPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLN 941
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISI--LHPPVDDPQSG 683
DT ++GG + ++ P DYP+ PPS LT + N +C+SI HP
Sbjct: 52 DTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHP-------- 101
Query: 684 ELPCERWNPTQSVRTVLL 737
E W P+ SVRT L+
Sbjct: 102 ----EHWQPSWSVRTALV 115
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 388 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGP 507
A++ + E K +Q P + F + L E+N+FEW+ AI GP
Sbjct: 12 AVKRILQEVKEMQANPSDDF-MSLPLEENIFEWQFAIRGP 50
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-WHPNVYENGDLCISILH 656
TLY ++ + FP YP P + FL HP++Y NG +C+ IL+
Sbjct: 56 TLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILY 104
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-WHPNVYENGDLCISILH 656
TLY ++ ++FP YP P + F++ HP++Y NG +C+ IL+
Sbjct: 56 TLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILY 104
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-WHPNVYENGDLCISILH 656
TLY + ++FP YP P + F+ HP++Y NG +C+ IL+
Sbjct: 56 TLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILY 104
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/74 (33%), Positives = 34/74 (45%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELP 692
T + GG++ +KFPP+YPY PP I T + L +S HP
Sbjct: 47 TPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHP----------- 95
Query: 693 CERWNPTQSVRTVL 734
E WNP SV ++L
Sbjct: 96 -ESWNPMWSVSSIL 108
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/74 (33%), Positives = 34/74 (45%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELP 692
T + GG++ +KFPP+YPY PP I T + L +S HP
Sbjct: 47 TPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHP----------- 95
Query: 693 CERWNPTQSVRTVL 734
E WNP SV ++L
Sbjct: 96 -ESWNPMWSVSSIL 108
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLT--KVWHPNVYENGDLCISILH 656
T Y G F + PP YP+ PP + + + +PN+YE+G +C+S+L+
Sbjct: 704 TPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-WHPNVYENGDLCISILH 656
TLY ++ ++FP YP P + F HP++Y NG +C+ +L+
Sbjct: 56 TLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLY 104
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 519 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 653
Y G F + YP+ P ++ TKV+HPN+ G++C++IL
Sbjct: 74 YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL 118
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISILHPPVDDPQSGE 686
T Y G F ++FP YP PP++ + + +PN+Y G +C+S+L +
Sbjct: 313 TPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAR--- 369
Query: 687 LPCERWNPTQSVRTVLL 737
E+W P +S LL
Sbjct: 370 ---EKWLPNESTMLQLL 383
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISILHPPVDDPQSGE 686
T Y G F ++FP YP PP + + + +PN+Y+ G +C+S++ +G+
Sbjct: 647 TPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI-----STWTGK 701
Query: 687 LPCERWNPTQSVRTVLL 737
E+W P +S LL
Sbjct: 702 -KREKWLPKESTMLQLL 717
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISI 650
T Y G F ++FP YP PP++ + + +PN+Y G + +SI
Sbjct: 959 TPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISIL 653
T Y G F + FP YP +PP + + + +PN+Y G +C+S+L
Sbjct: 374 TPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLL 422
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
+T Y+G F+ + DYP SPP++RF +++
Sbjct: 56 NTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
+T Y+G F+ + +YP SPP++RF T++
Sbjct: 56 NTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 839
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 317 KLYKHITLELFMLSTYPPGISLVTITTN*KFW*T*HRYCSIHKYVSHTSNVNP*IFVNNL 138
K+ H++ + L Y G+ L+T+TTN + W H +I N VNN+
Sbjct: 144 KISVHLSRSISPLENYSFGVFLMTLTTNTRIWNALHNEAAISTLTKSVLQANT---VNNV 200
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
+T+++G ++ + DYP PP++RF ++V
Sbjct: 58 NTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
T+++G ++ + DYP PP++RF ++V
Sbjct: 60 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 510 DTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
+T+++G ++ + DYP PP++RF +++
Sbjct: 57 NTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 489 SGNLRTADTLYQGGYFKAHMKFPPDYPYSPP 581
SG+ R + GGY+ K +YPY+PP
Sbjct: 87 SGSYRPPPSSSSGGYYYPPPKSGGNYPYTPP 117
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 513 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 605
T+++G ++ + DYP PP++RF +++
Sbjct: 59 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At5g28780.1 68418.m03538 hypothetical protein various predicted
proteins, Arabidopsis thaliana
Length = 337
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -3
Query: 384 TRWNSVRHCQLCIYSTFTTYLNKII*TYHFGTLYAVHVSTRHFTRHNNNELE 229
T+WN+ RHC C Y+ N T V + T F +HN N L+
Sbjct: 49 TKWNTSRHC-TCCYNVG----NGNAPTCETDDGEVVEMDTSFFLKHNGNRLQ 95
>At5g19480.1 68418.m02321 expressed protein
Length = 207
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 132 KSRRNNRPKAHDQLNNNEKAKHRSTK 55
K R+NN + D + ++K+KH+S+K
Sbjct: 175 KKRKNNGTEDADDVQRHKKSKHKSSK 200
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 389 PSGL*RWSTRVCKKNL*KVSVLNC*ERTIYLSGKWQSSDRGYTLS 523
PS L + S R + NL +V ++ T Y G WQ S RG + S
Sbjct: 7 PSKLSKLSLRAKQTNLYRVILIAILCVTFYFVGVWQHSGRGISRS 51
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,899,756
Number of Sequences: 28952
Number of extensions: 375908
Number of successful extensions: 997
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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