Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30607
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   1.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.9  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.9  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.9  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 106 DLRVVLCRGGSDDGSHK 56
           DL+++L  GG ++GS+K
Sbjct: 92  DLKIILSMGGWNEGSYK 108


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 438 GGCSPHNPVLRLHYLNLS 385
           G C P NP++ + Y N++
Sbjct: 378 GLCGPKNPLINILYANMN 395


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 469 IKLITSNKRMWW 434
           I+ +  NKR WW
Sbjct: 88  IRYLIKNKRDWW 99


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 472 SIKLITSNKRMWWMFATQS 416
           S+K  T   ++WW F  ++
Sbjct: 49  SLKQYTCELKLWWEFCQRN 67


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 469 IKLITSNKRMWW 434
           I+ +  NKR WW
Sbjct: 88  IRYLIKNKRDWW 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,614
Number of Sequences: 336
Number of extensions: 2227
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)