Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30606
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   155   5e-38
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   153   1e-37
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   153   1e-37
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   153   1e-37
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   153   1e-37
AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    31   1.8  
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    31   1.8  
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro...    29   5.4  
AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related p...    29   5.4  
AY071063-1|AAL48685.1|  802|Drosophila melanogaster RE14222p pro...    29   5.4  
AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-P...    29   5.4  
AE014297-4705|AAF57115.2|  802|Drosophila melanogaster CG11318-P...    29   5.4  
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P...    29   5.4  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    28   9.4  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  155 bits (376), Expect = 5e-38
 Identities = 68/85 (80%), Positives = 78/85 (91%)
 Frame = +1

Query: 256 KKYEEICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 435
           KKYE+ICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRL 127

Query: 436 DFDSGKELLCTVLKSCGEECVIAVK 510
           DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152



 Score =  124 bits (298), Expect = 1e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKXHL 232
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAK H+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNVKSMKKSVP 280
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  153 bits (372), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 256 KKYEEICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 435
           KKYE+ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 436 DFDSGKELLCTVLKSCGEECVIAVK 510
           DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152



 Score =  120 bits (290), Expect = 1e-27
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKXHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAK H+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNVKSMKKSVP 280
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  153 bits (372), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 256 KKYEEICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 435
           KKYE+ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 436 DFDSGKELLCTVLKSCGEECVIAVK 510
           DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152



 Score =  124 bits (298), Expect = 1e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKXHL 232
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAK H+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNVKSMKKSVP 280
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  153 bits (372), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 256 KKYEEICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 435
           KKYE+ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 436 DFDSGKELLCTVLKSCGEECVIAVK 510
           DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152



 Score =  120 bits (290), Expect = 1e-27
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKXHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAK H+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNVKSMKKSVP 280
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  153 bits (372), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 256 KKYEEICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 435
           KKYE+ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 436 DFDSGKELLCTVLKSCGEECVIAVK 510
           DFDSGK+LLCTVLK+CGEECVIA+K
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIK 152



 Score =  120 bits (290), Expect = 1e-27
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +2

Query: 53  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKXHL 232
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAK H+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 233 VGIDIFNVKSMKKSVP 280
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 204 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 52
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 204 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 52
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
           protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 149 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 66
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related
           protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = -3

Query: 456 FLAAVEVSTQLCAEVTIRDFEVLTQV---TVVSHQGQVAIIRDISQLVVFALHVGYVHVV 286
           FL  + VS  LC       F + T +   T+    G +    D S ++  +  + Y + +
Sbjct: 218 FLLCLTVSRTLCIAYVASIFPIETLIICATLACFYGTIVFFVD-SPMIAKSRPMNYSYCL 276

Query: 285 CGGTDFFILFTLKISIPTK 229
           C G  +  +FT     PTK
Sbjct: 277 CFGVVYLFIFTPVKDAPTK 295


>AY071063-1|AAL48685.1|  802|Drosophila melanogaster RE14222p
           protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 241 NPNQVXFSVAVLSGFGCGHFNYLAWTT 161
           NP+   FS+    G GCG++NY  W+T
Sbjct: 425 NPDSKAFSI----GSGCGYWNYETWST 447


>AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-PA
           protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = -3

Query: 456 FLAAVEVSTQLCAEVTIRDFEVLTQV---TVVSHQGQVAIIRDISQLVVFALHVGYVHVV 286
           FL  + VS  LC       F + T +   T+    G +    D S ++  +  + Y + +
Sbjct: 218 FLLCLTVSRTLCIAYVASIFPIETLIICATLACFYGTIVFFVD-SPMIAKSRPMNYSYCL 276

Query: 285 CGGTDFFILFTLKISIPTK 229
           C G  +  +FT     PTK
Sbjct: 277 CFGVVYLFIFTPVKDAPTK 295


>AE014297-4705|AAF57115.2|  802|Drosophila melanogaster CG11318-PA
           protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 241 NPNQVXFSVAVLSGFGCGHFNYLAWTT 161
           NP+   FS+    G GCG++NY  W+T
Sbjct: 425 NPDSKAFSI----GSGCGYWNYETWST 447


>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
           isoform A protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 149 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 66
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 45   TQQWVTSKTHTLRPETPGPQPPSPCNVRPCVKT 143
            TQ  +T+ T T   + P P PP PC   P V T
Sbjct: 2438 TQPTITNTTTTNTTKVPPPVPPKPCT--PVVAT 2468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,527,827
Number of Sequences: 53049
Number of extensions: 665330
Number of successful extensions: 2128
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)