Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30605
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 145 1e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 8e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 124 2e-27
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 118 2e-25
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 105 1e-21
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 105 1e-21
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 103 5e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 9e-21
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 91 2e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 90 5e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 89 9e-17
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 74 3e-12
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 74 3e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 73 7e-12
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 72 1e-11
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 71 2e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 71 3e-11
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 53 6e-06
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 51 2e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 7e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.011
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.019
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 42 0.019
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.024
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 40 0.043
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 40 0.056
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.056
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 38 0.30
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.70
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 2.8
UniRef50_Q8D7W5 Cluster: Predicted membrane protein; n=4; Gammap... 33 4.9
UniRef50_UPI00006CB684 Cluster: hypothetical protein TTHERM_0044... 33 6.5
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 6.5
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.5
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.6
UniRef50_A0W872 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gamb... 33 8.6
UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q8GUM5 Cluster: Nicastrin precursor; n=3; Arabidopsis t... 33 8.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 145 bits (351), Expect = 1e-33
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
GFT KDS+SQRKTCYAQH+Q++ IR K+
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 121 bits (292), Expect = 1e-26
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 238 ERSFR 252
ERSFR
Sbjct: 81 ERSFR 85
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = +2
Query: 515 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLKKPRF++S
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLS 229
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (319), Expect = 8e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 1e-21
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 124 bits (299), Expect = 2e-27
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = +3
Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419
+ + + RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
CI FT K +KTCYAQ +Q+R IR+K+
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKM 563
Score = 100 bits (239), Expect = 4e-20
Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +1
Query: 64 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD-AE 240
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D A
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQAY 476
Query: 241 RSFR 252
R R
Sbjct: 477 RKIR 480
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 AHSGQSNQ--KENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 649
A S Q Q ++ EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKV
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKV 610
Query: 650 KVLKKPRFEI 679
K+LK P+F++
Sbjct: 611 KILKAPKFDL 620
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 118 bits (283), Expect = 2e-25
Identities = 57/97 (58%), Positives = 73/97 (75%)
Frame = +3
Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419
+VF + +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKIVKSLHAT 530
I FT K ++KT YA+ ++V+AIRKK+V L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Frame = +1
Query: 61 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 228
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ D
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 105 bits (252), Expect = 1e-21
Identities = 51/91 (56%), Positives = 65/91 (71%)
Frame = +3
Query: 243 VFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 422
+F +F+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 423 IGFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
I FT K Q+ YAQ T+++ +R +IV+
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +2
Query: 503 ENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEI 679
E E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLKKP+ ++
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDL 150
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 105 bits (252), Expect = 1e-21
Identities = 48/98 (48%), Positives = 69/98 (70%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F + +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVKSLHATSLT 539
T + +KT YA +Q+RAIR+K+ + + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +1
Query: 64 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 234
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED 78
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/61 (49%), Positives = 48/61 (78%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+++ EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F+
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFD 224
Query: 677 I 679
+
Sbjct: 225 L 225
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 103 bits (246), Expect = 5e-21
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = +3
Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419
K + + +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 420 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKI 509
+ FT K S S TCYA+ +QVRAIR+KI
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +1
Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 240
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 241 RSFR 252
+++R
Sbjct: 82 KAWR 85
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 518 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
IT + + E LI + K IEK I+PL+++ IRKVKVLK+P+ +
Sbjct: 178 ITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLD 230
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 9e-21
Identities = 45/83 (54%), Positives = 63/83 (75%)
Frame = +3
Query: 255 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 434
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 435 NKDSLSQRKTCYAQHTQVRAIRK 503
++ S +KT YA+ Q++ IRK
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKIRK 168
Score = 75.8 bits (178), Expect = 9e-13
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 219
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +1
Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 240
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 241 RSFR 252
R F+
Sbjct: 82 RKFK 85
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFE 171
Query: 677 I 679
+
Sbjct: 172 L 172
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 238 ERSFR 252
R F+
Sbjct: 78 FRKFK 82
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 398
F +F+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 89.8 bits (213), Expect = 5e-17
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +3
Query: 258 RLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 437
+LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT
Sbjct: 84 KLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTK 143
Query: 438 KDSLSQRKTCYAQHTQVRAIRKKIVK 515
QRKT YAQ +Q++ IRKKIV+
Sbjct: 144 SIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +1
Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 234
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD 76
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/60 (31%), Positives = 42/60 (70%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++K+P+ +
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 89.0 bits (211), Expect = 9e-17
Identities = 36/94 (38%), Positives = 60/94 (63%)
Frame = +3
Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419
+ + + R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKIVKSL 521
+ FT + Q + CYA+ V+ +R +I K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +1
Query: 64 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 243
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 244 SFR 252
++R
Sbjct: 83 AYR 85
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/55 (30%), Positives = 38/55 (69%)
Frame = +2
Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+
Sbjct: 173 KMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFD 227
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/80 (42%), Positives = 53/80 (66%)
Frame = +3
Query: 282 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 461
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 462 TCYAQHTQVRAIRKKIVKSL 521
YA + R +R ++K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 456 RKTCYAQHTQVRAIRK 503
+KTCY +H+ + IRK
Sbjct: 103 KKTCYVKHSDEKKIRK 118
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/62 (29%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +2
Query: 479 HSGQSN-QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 655
HS + +K ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK
Sbjct: 110 HSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKT 169
Query: 656 LK 661
+K
Sbjct: 170 IK 171
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = +3
Query: 252 QFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 431
+F L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 432 TNKDSLSQRKTCYAQHTQVRAIRKKIVKSLH 524
T++ +RK C+ + +R +R I ++LH
Sbjct: 143 TDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 64 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 219
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 243 VFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 422
V +F+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 423 IGF-TNKDSLSQRKTCYAQHTQVRAI 497
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = +2
Query: 527 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEI 679
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L+KP+ ++
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDL 208
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +1
Query: 76 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 252
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +2
Query: 560 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEI 679
NKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 40
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +3
Query: 303 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 482
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 483 QVRAIRKKI 509
Q RA+R++I
Sbjct: 156 QKRALRRRI 164
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +2
Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 661
+II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 166 DIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = -3
Query: 234 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 55
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 54 LLNTFFTALRQAFIFPD 4
LL++ F L +FPD
Sbjct: 136 LLSSLF-PLGNPLVFPD 151
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/94 (31%), Positives = 54/94 (57%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 456 RKTCYAQHTQVRAIRKKIVKSLHATSLTLNSGRW 557
+K+ A+RKK++++L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 309 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 458
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 456 RKT 464
KT
Sbjct: 137 IKT 139
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ E +T E V +I D +++ K IYP+R + IRK +VL P +
Sbjct: 142 RKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEK 201
Query: 677 I 679
I
Sbjct: 202 I 202
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 456 RKTCYAQHTQVRAIRKKIVK 515
T A+ +Q RAIRK++ K
Sbjct: 119 --TRRAKTSQQRAIRKEMFK 136
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRKVKVLKK 664
+KE ++I + + E + + + +SI + I++A IYP+R IRK +VL++
Sbjct: 131 RKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEE 190
Query: 665 P 667
P
Sbjct: 191 P 191
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTT 138
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 41.5 bits (93), Expect = 0.019
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 315 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 494
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 495 IRKKIVKSLHATS 533
IR+ ++ +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.1 bits (92), Expect = 0.024
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +3
Query: 174 GRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 353
G++ G+ S G T + + FR+ E + G + +F G +LT D +R +VK+
Sbjct: 40 GKMIGRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKR 97
Query: 354 WQTLIEANIDVKTTDGYVLRVFCIGFTNK 440
+ I+AN+ V T DG+ +RV I T K
Sbjct: 98 RTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 228
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 40.3 bits (90), Expect = 0.043
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT------V 129
Query: 456 RKTCYAQHTQVRAIRKKIV 512
R+ +Q +RAI ++IV
Sbjct: 130 RRCKTSQKRAIRAIMRQIV 148
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 39.9 bits (89), Expect = 0.056
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +3
Query: 159 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLR 338
+E+ GRI + + F G T H V +FR ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 339 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 440
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.9 bits (89), Expect = 0.056
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +3
Query: 153 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTT 326
P N+ N GRI S R T+ H + F++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTR 95
Query: 327 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKK 506
+ L+ V++ ++ I A ++V+T DG+ +RV + T + K T++R ++
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHK------TEIRVRMEQ 149
Query: 507 IVKSL 521
I+K +
Sbjct: 150 IIKEM 154
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/79 (27%), Positives = 41/79 (51%)
Frame = +3
Query: 279 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 458
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + +L+
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTL------ALTAY 132
Query: 459 KTCYAQHTQVRAIRKKIVK 515
+ Q T +R I + +VK
Sbjct: 133 RVHREQATTIRKIMEDVVK 151
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.70
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 276 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 455
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 456 RKT 464
+K+
Sbjct: 130 QKS 132
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 568 QLVHHLPEFRVSDVACNDFTIFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 413
+L+H + S AC D FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 315 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRKTCYAQHTQVR 491
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K + T +
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKA--IRRTMID 140
Query: 492 AIRK 503
+R+
Sbjct: 141 LVRE 144
>UniRef50_Q8D7W5 Cluster: Predicted membrane protein; n=4;
Gammaproteobacteria|Rep: Predicted membrane protein -
Vibrio vulnificus
Length = 423
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -2
Query: 394 VVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNCGKTFPRQCQLVD 215
V+FTS+ A + LT+ S ++ R P T+ P S I L+CG FPR ++
Sbjct: 211 VLFTSVFAGLSSSTALTLQFS-NLSREQP-----TISPLLASGILLSCGTMFPRLLVVLS 264
Query: 214 --QPGKLRKLFPSIL 176
P + +L+P +L
Sbjct: 265 VLNPALVTQLWPIVL 279
>UniRef50_UPI00006CB684 Cluster: hypothetical protein
TTHERM_00446420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446420 - Tetrahymena
thermophila SB210
Length = 1054
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 446 LEPTQDVLRPAHSGQSNQKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 616
L+P Q V + GQ+NQ +N E +++ N+ RE V +L PDS+ + +K H I
Sbjct: 471 LQPNQAVNKTFSEGQTNQNQNQENY-QNINNT--REDVGQL-PDSLGQPFQKQFHSI 523
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 509 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 303 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 461
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 313 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 438
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A0W872 Cluster: Putative uncharacterized protein; n=1;
Geobacter lovleyi SZ|Rep: Putative uncharacterized
protein - Geobacter lovleyi SZ
Length = 288
Score = 32.7 bits (71), Expect = 8.6
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 QFRLIAEYVQGRNVLCNFH-GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 428
QFRL E+++G N + + MD T K R VK+W TL D + ++ G
Sbjct: 204 QFRLCCEWLKGCNKIKTLNRSMDSYTLKRR--VKRWATLKGVEDDYVSNGAFIAAAIHCG 261
Query: 429 FTNK 440
FT K
Sbjct: 262 FTLK 265
>UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010616 - Anopheles gambiae
str. PEST
Length = 304
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 476 AHSGQSNQKENCEIITRDVTNSELREVVNKLIPDSIAKDIEK 601
A QSN+KE +++ DV+ E+ +V K + + K++EK
Sbjct: 199 AAEAQSNEKETKDVVMEDVSVQEVGKVSEKEVEKVVEKEVEK 240
>UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 451
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 455 TQDVLRPAHSGQSNQKENCEI--ITRDVTNSELREVVNKLIPDSIAKD 592
TQ+V+ +H+ + ++ C I + +DVT ELR+ +N S KD
Sbjct: 327 TQEVINDSHAQKMRERGRCVIMGLPKDVTVDELRKAINNRFATSNKKD 374
>UniRef50_Q8GUM5 Cluster: Nicastrin precursor; n=3; Arabidopsis
thaliana|Rep: Nicastrin precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 676
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -1
Query: 515 FHNFLSDCSDLSVLGVARLA--LAQGVLIGETNAEDT*NVSIGCLHINVGFDESL 357
+H+ L D S+++ V A +A+ + I ++ +DT N ++G +H+N F E L
Sbjct: 433 YHSHLDDLSNINSSSVVAAASVVARTLYILASDNKDTSNSALGSIHVNASFVEEL 487
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,421,171
Number of Sequences: 1657284
Number of extensions: 14448947
Number of successful extensions: 42467
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 40850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42456
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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