BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30605 (683 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 126 2e-29 02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 124 7e-29 12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 123 1e-28 11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504,439... 29 3.4 06_03_0290 - 19193707-19193752,19193822-19194090 28 6.0 03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 7.9 >03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723, 5243794-5243979,5244075-5244275,5244362-5244460 Length = 262 Score = 126 bits (303), Expect = 2e-29 Identities = 57/92 (61%), Positives = 74/92 (80%) Frame = +3 Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419 + + + RL AE VQG+NVL NF GM TTDKLR +VKKWQTLIEA++DVKTTDGY+LR+F Sbjct: 79 QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLF 138 Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515 CIGFT + ++TCYAQ +Q+R IR+K+V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 99 bits (238), Expect = 2e-21 Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD-A 237 VDPF +KDWYD+KAPS+F+ R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D A Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80 Query: 238 ERSFR 252 R R Sbjct: 81 YRKIR 85 Score = 63.7 bits (148), Expect = 1e-10 Identities = 26/61 (42%), Positives = 46/61 (75%) Frame = +2 Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676 +++ EI+ ++ +L+E+V+K IP+ I K+IEKA I+PL++V +RKVK+LK P+F+ Sbjct: 165 RRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFD 224 Query: 677 I 679 + Sbjct: 225 L 225 >02_02_0482 - 10819562-10819813,10820773-10820952,10822073-10822150, 10823056-10823256,10823365-10823550,10823646-10823783, 10824396-10824501,10824634-10824692 Length = 399 Score = 124 bits (299), Expect = 7e-29 Identities = 57/92 (61%), Positives = 73/92 (79%) Frame = +3 Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419 + + + RL AE VQGRNVL NF GM TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F Sbjct: 79 QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138 Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515 CIGFT + ++TCYAQ +Q+R IR+K+V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 99 bits (238), Expect = 2e-21 Identities = 45/58 (77%), Positives = 52/58 (89%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 234 VDPF++KDWYD+KAP++FS R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D Sbjct: 21 VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 78 Score = 62.5 bits (145), Expect = 3e-10 Identities = 26/61 (42%), Positives = 45/61 (73%) Frame = +2 Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676 +++ EI+ + +L+E+V+K IP+ I K+IEK+ I+PL++V IRKVK+LK P+F+ Sbjct: 165 RRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPKFD 224 Query: 677 I 679 + Sbjct: 225 L 225 >12_02_0012 - 12309332-12310228,12311087-12311669,12311945-12312051, 12313190-12313237,12315139-12315216,12315300-12315500, 12315612-12315797,12315870-12316007,12318311-12318416, 12318529-12318587 Length = 800 Score = 123 bits (297), Expect = 1e-28 Identities = 56/92 (60%), Positives = 73/92 (79%) Frame = +3 Query: 240 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 419 + + + RL AE VQG+NVL NF GM TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F Sbjct: 79 QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138 Query: 420 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515 CIGFT + ++TCYAQ +Q+R IR+K+V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 100 bits (239), Expect = 1e-21 Identities = 49/65 (75%), Positives = 54/65 (83%), Gaps = 1/65 (1%) Frame = +1 Query: 61 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD-A 237 VDPF +KDWYD+KAPS+F+ R VG TLV+RTQGTKIASEGLK RVFEVSLADLQ D D A Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80 Query: 238 ERSFR 252 R R Sbjct: 81 YRKIR 85 Score = 63.7 bits (148), Expect = 1e-10 Identities = 26/61 (42%), Positives = 46/61 (75%) Frame = +2 Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676 +++ EI+ ++ +L+E+V+K IP+ I K+IEKA I+PL++V +RKVK+LK P+F+ Sbjct: 165 RRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFD 224 Query: 677 I 679 + Sbjct: 225 L 225 >11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504, 4398608-4398709 Length = 309 Score = 29.1 bits (62), Expect = 3.4 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 551 EVVNKLIPDSIAKDIEKACHGIYPLRD 631 ++VN IPD + + ++K C IY LR+ Sbjct: 34 QLVNTGIPDDLLERVKKVCSDIYKLRE 60 >06_03_0290 - 19193707-19193752,19193822-19194090 Length = 104 Score = 28.3 bits (60), Expect = 6.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 295 SATSTAWTSQPISSGGWLKNGRLSSKPTLM 384 +A S A T P S GW+ G S+ P+L+ Sbjct: 67 AAGSAARTRSPSQSNGWITGGSASAMPSLV 96 >03_05_0791 + 27736978-27737217,27737648-27739191,27739512-27739763, 27739844-27739954,27740042-27740102,27740373-27740558 Length = 797 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 204 NFENSSLQSFRSNFRSLGTVDKRGADLPLAE 112 +FENS LQSF +L + K+G P E Sbjct: 216 SFENSELQSFTDKIENLSSSQKKGYFKPKRE 246 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,202,166 Number of Sequences: 37544 Number of extensions: 418029 Number of successful extensions: 1205 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1205 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1733104716 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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