Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30605
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 132 1e-30
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 132 1e-30
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 132 1e-30
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 132 1e-30
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 132 1e-30
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 36 0.18
Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading... 31 5.0
BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46 pro... 31 5.0
BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46 pro... 31 5.0
BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46 pro... 31 5.0
AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open readi... 31 5.0
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (319), Expect = 1e-30
Identities = 60/90 (66%), Positives = 74/90 (82%)
Frame = +3
Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKIVK 515
GFT K + RKT YAQH QVR IRKK+++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 2e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 58 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 238 ERSFR 252
R F+
Sbjct: 81 FRKFK 85
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 497 QKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFE 676
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LKKP+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 677 I 679
+
Sbjct: 225 L 225
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 620 PLRDVCIRKVKVLKKPRFEI 679
PL DV +RKVK+LKKP+FE+
Sbjct: 1 PLHDVFVRKVKMLKKPKFEL 20
>Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 673 ETGLLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 557
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,049,741
Number of Sequences: 237096
Number of extensions: 2269270
Number of successful extensions: 9542
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9542
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -