Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30605
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   144   1e-34
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   144   1e-34
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   144   1e-34
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   144   1e-34
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   141   9e-34
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...   107   2e-23
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro...    29   5.9  
AY051866-1|AAK93290.1|  332|Drosophila melanogaster LD36157p pro...    29   5.9  
AE014298-2587|AAF48743.1|  332|Drosophila melanogaster CG8326-PA...    29   5.9  
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,...    29   5.9  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  144 bits (348), Expect = 1e-34
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = +3

Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
           F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
           GFT KD  SQRKTCYAQ +QVR IR ++
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARM 171



 Score =  111 bits (268), Expect = 6e-25
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 238 ERSFR 252
           ERSFR
Sbjct: 81  ERSFR 85


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  144 bits (348), Expect = 1e-34
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = +3

Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
           F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
           GFT KD  SQRKTCYAQ +QVR IR ++
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARM 171



 Score =  111 bits (268), Expect = 6e-25
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 238 ERSFR 252
           ERSFR
Sbjct: 81  ERSFR 85



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +2

Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
           +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLKKPRF++S
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVS 229


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  144 bits (348), Expect = 1e-34
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = +3

Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
           F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93

Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
           GFT KD  SQRKTCYAQ +QVR IR ++
Sbjct: 94  GFTAKDQQSQRKTCYAQQSQVRKIRARM 121



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +2

Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
           +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLKKPRF++S
Sbjct: 123 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVS 179



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = +1

Query: 187 GRVFEVSLADLQADTDAERSFR 252
           GRVFEVSLADLQ D D ERSFR
Sbjct: 14  GRVFEVSLADLQKDIDPERSFR 35


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  144 bits (348), Expect = 1e-34
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = +3

Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
           F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143

Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIRKKI 509
           GFT KD  SQRKTCYAQ +QVR IR ++
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARM 171



 Score =  111 bits (268), Expect = 6e-25
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 237
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 238 ERSFR 252
           ERSFR
Sbjct: 81  ERSFR 85



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +2

Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
           +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLKKPRF++S
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVS 229


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  141 bits (341), Expect = 9e-34
 Identities = 66/85 (77%), Positives = 71/85 (83%)
 Frame = +3

Query: 246 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 425
           F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144

Query: 426 GFTNKDSLSQRKTCYAQHTQVRAIR 500
           GFT KD  SQRKTCYA  +QVR IR
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169



 Score =  102 bits (244), Expect = 5e-22
 Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
 Frame = +1

Query: 58  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 234
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 235 AERSFR 252
            E SFR
Sbjct: 81  PEHSFR 86



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +2

Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
           +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLKKPRF++S
Sbjct: 175 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVS 231


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score =  107 bits (256), Expect = 2e-23
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = +3

Query: 312 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 491
           MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60

Query: 492 AIRKKI 509
            IR ++
Sbjct: 61  KIRARM 66



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +2

Query: 512 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKKPRFEIS 682
           +IIT +V+ ++L+++VNKL  DSIAKDIEK+C  IYPL DV IRKVKVLKKPRF++S
Sbjct: 68  DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVS 124


>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
           protein.
          Length = 1325

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 320 EVHAVEVAE--HITSLHIFGD*SELRKDLSASVSACRSARETS 198
           +V+A+E AE  HI +  +  D     K  S+S S CRS+++TS
Sbjct: 650 DVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTS 692


>AY051866-1|AAK93290.1|  332|Drosophila melanogaster LD36157p
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/70 (24%), Positives = 34/70 (48%)
 Frame = +2

Query: 470 RPAHSGQSNQKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 649
           +P  S  S +  N +    +     LR V N++   S+ +   +A +G+  +R+    ++
Sbjct: 83  KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141

Query: 650 KVLKKPRFEI 679
            V K+P+ EI
Sbjct: 142 TVQKRPKNEI 151


>AE014298-2587|AAF48743.1|  332|Drosophila melanogaster CG8326-PA
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/70 (24%), Positives = 34/70 (48%)
 Frame = +2

Query: 470 RPAHSGQSNQKENCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 649
           +P  S  S +  N +    +     LR V N++   S+ +   +A +G+  +R+    ++
Sbjct: 83  KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141

Query: 650 KVLKKPRFEI 679
            V K+P+ EI
Sbjct: 142 TVQKRPKNEI 151


>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
           isoform A protein.
          Length = 1325

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 320 EVHAVEVAE--HITSLHIFGD*SELRKDLSASVSACRSARETS 198
           +V+A+E AE  HI +  +  D     K  S+S S CRS+++TS
Sbjct: 650 DVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTS 692


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,423,745
Number of Sequences: 53049
Number of extensions: 690208
Number of successful extensions: 2069
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)