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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30604
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0275 + 8478374-8478706                                           33   0.19 
06_03_0335 + 19662933-19663334,19663358-19664023                       30   1.4  
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400...    30   1.8  
09_04_0021 - 13861369-13861538,13862274-13862432,13862493-138627...    30   1.8  
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861     29   2.4  
06_03_0509 + 21613541-21613837                                         29   2.4  
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799...    29   2.4  
12_02_1209 - 27019724-27020040,27020690-27020945                       29   4.2  
11_06_0183 - 20999343-20999865,21000351-21000748                       29   4.2  
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    29   4.2  
06_03_0854 + 25400855-25403741,25406174-25407708                       28   5.5  
03_02_0915 + 12360079-12360095,12360225-12361353                       28   5.5  
11_04_0008 + 12115147-12115354,12115397-12116130                       28   7.3  
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703...    28   7.3  
01_01_0051 + 389051-389623                                             28   7.3  
06_03_0325 + 19600379-19600454,19601686-19601873,19602113-19602226     27   9.7  
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566...    27   9.7  
01_06_1509 - 37855894-37856679,37856766-37856952,37857508-378575...    27   9.7  
01_06_0005 - 25514039-25514137,25514508-25514570,25514937-255150...    27   9.7  
01_05_0560 - 23288078-23288370,23288448-23288733                       27   9.7  
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324...    27   9.7  

>02_02_0275 + 8478374-8478706
          Length = 110

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 68  ISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAVPVMSECSG 205
           +SV+ DRCP    H R    +A A     P  P   A P  +  SG
Sbjct: 27  VSVSGDRCPVLHHHRRLHDMVAAAVVSQPPPRPPPPAAPAAARTSG 72


>06_03_0335 + 19662933-19663334,19663358-19664023
          Length = 355

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 219 HHHPAPEHSDITGTADVEGSSGD 151
           HHH   +H D+   A V GSSGD
Sbjct: 216 HHHRRTDHVDVVEVAVVTGSSGD 238


>11_06_0189 -
           21039217-21039348,21039480-21039738,21039841-21040004,
           21040371-21040533,21040615-21042137
          Length = 746

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
 Frame = +1

Query: 367 QPAXMTDGEQLV----QLPDNVTIK--LRVHAH----PHSTHIELQNVDQDDISASDTVV 516
           QP  M +  Q+     Q+P N  ++  + V  H    PH  + ++Q+    ++ ++    
Sbjct: 196 QPFYMDEQSQMYAPYQQIPSNFLLQHDMDVQNHSSMQPHYVYPQMQHAAGSNVRSNQQAA 255

Query: 517 VC-SVRSQHTYSHESLID 567
            C S R + TY H+ L+D
Sbjct: 256 ACTSARGRSTYGHQLLLD 273


>09_04_0021 -
           13861369-13861538,13862274-13862432,13862493-13862720,
           13864057-13864246
          Length = 248

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +3

Query: 363 VSAGXDDGWRATRAAARQRNDKAASARAPALNAHRTAERRSGRYIGQR 506
           V+A  D GW    AAA +R  +  +AR  A  A  TA     R   QR
Sbjct: 4   VAAPEDSGWLVGGAAATRRRGRLCAARGEARVAELTATMAGRRKARQR 51


>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
          Length = 158

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 399 RAAARQRNDKAASAR-APALNAHRTAERRSGRYIGQRYRRRLFGAFATHIFARVTNR 566
           RAA R++ ++ A  R A      R A RR  R  G+R RRR  G F    + +V  R
Sbjct: 89  RAAGRRKEEEEAGRRKAGEETRRRGAGRRKRRRGGRRRRRRRRGRFLYSPYWKVDTR 145


>06_03_0509 + 21613541-21613837
          Length = 98

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 390 RATRAAARQRNDKAASARAPALNAHRTAERRSGRYIGQRYRRR 518
           R+ R+AA    ++AASAR    +     +RRSG   G+R RRR
Sbjct: 51  RSRRSAAAAAKEEAASARWRKRSGAVGRKRRSGVVGGKRKRRR 93


>06_02_0364 +
           15178583-15178881,15179652-15179723,15179853-15179917,
           15180890-15180934,15182493-15183170,15183376-15183410,
           15183647-15183736,15183896-15183985,15184164-15184262,
           15184938-15185013,15185473-15185588
          Length = 554

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 221 YTTTPRPNIPTSPVLRTWRVPLATSWVAPQLKYASCGCARRTAGSGR 81
           + +TPRP  P  P  R  R PLA+     + +   C CA  ++ SGR
Sbjct: 7   FLSTPRPPPPLVPAHR--RRPLASRSGLRRREGCPCSCASSSSSSGR 51


>12_02_1209 - 27019724-27020040,27020690-27020945
          Length = 190

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 393 ATRAAARQRNDKAASARAPALNAHRTAERRSGR 491
           A  AAA +R+D+ AS+RA +L A R A  RS R
Sbjct: 19  AAAAAAARRDDEGASSRAASLAASRVA--RSAR 49


>11_06_0183 - 20999343-20999865,21000351-21000748
          Length = 306

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 271 RYPPPANTFDSKPEIPFLTFTIVHDDGNKEWCQPAXMTDGEQLVQLPDNVTIKLRVHAH- 447
           R PPP    D+KP  P ++ + +   G     +   M DG ++V L D+ +    +H   
Sbjct: 153 RPPPPPADDDAKPAEPRVSLSALSVVGGDNTMRLPVMIDGLRVVSLIDSGSTHNFIHTEL 212

Query: 448 PHSTHIELQNV 480
            H   + L+ V
Sbjct: 213 AHHLRLRLEPV 223


>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
            901912-902016,902245-902391,903273-903354,903445-903786,
            903873-904177,904259-904435,904799-904852,905171-905254,
            905855-905968,906048-906321,907552-907926,908003-908267,
            908352-908538,908615-909052,909895-909966,910037-910630,
            911471-911623,911700-911828,912326-912657,912705-912840,
            913046-913491,913580-915087,915169-915431,915622-915738,
            915844-916014,916743-916845,916930-916988,918360-918461,
            918560-918649,918727-918877,919745-919830,919926-920102,
            920915-920978,921859-922008,923132-923211,923311-923376,
            924540-924747,925502-925575,925761-925848,926140-926312,
            926541-926609,926698-926741,927074-927167,927290-927366,
            927475-927552,927992-928085
          Length = 3314

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 475  NVDQDDISASDTVVVCSVRSQHTYSHESLIDTGELSVPQSLDRL 606
            N  Q+ ++AS TV+  S+ S   + HES      LSVP+S+  L
Sbjct: 1099 NSSQNSMNASLTVLDLSLVSVRVHFHESCGILATLSVPESIAAL 1142


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -2

Query: 269  LLCEGSCSASPLGDE-RYTTTPRPNIPTSPVLRTWRVPLATSWVAPQLKYASCGCARRTA 93
            L   G+ +  P+  +    T     +P  PVL    V +AT +      Y +  CA  TA
Sbjct: 1412 LAASGAAAPPPVPAKLELATAAATTLPEKPVLTAHEVVMATLFPNGVFSYIAIACATATA 1471

Query: 92   G 90
            G
Sbjct: 1472 G 1472


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = -2

Query: 356 LLPSSCTIVKVRNGISGLESKVLAG-GG*RLLCEGSCSASPLGDERYTTTPRPNIPTSPV 180
           L+PS CT+V VR  ++G  ++ +      + + +G   +S   D   T+T          
Sbjct: 26  LIPSGCTVV-VRRRVAGPPAETIVELTTKKPMSQGGGGSS--SDSGATSTGAEVDDEEKA 82

Query: 179 LRTWRVPLATSWVAPQLKYASCGCARRTAGSGRVPPRSSICLR 51
           +          W AP  +   C    R A +GR PP   +C R
Sbjct: 83  ISAVIDAAQLKWEAPTSQGGHC-YGHRGAHAGRAPPAGYVCHR 124


>11_04_0008 + 12115147-12115354,12115397-12116130
          Length = 313

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 181 YCGRGGFLWRHHGLRHS*SMPRAVVHDELRAAVACHR 71
           Y GRGG +WR H L        A+V  +LR   AC R
Sbjct: 40  YLGRGGPMWRGHELPR--RSATAMVAADLRRRGACWR 74


>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
            32870640-32870761,32873139-32873167,32873586-32873891,
            32873977-32874035,32874148-32874279,32874414-32874455,
            32874560-32875093,32875189-32875379,32875538-32876027,
            32876273-32876335,32876704-32876805,32876895-32877215,
            32877294-32877386,32877484-32877585,32877718-32877822,
            32877933-32878066,32878429-32878612,32879226-32879357,
            32879447-32879559,32879628-32879709,32880328-32881992
          Length = 1746

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 378  DDGWRATRAAARQRN-DKAASARAPALNAHRTAERRSGRYIGQRYR 512
            D+GW+A     R  N  K +S R PAL          GR  G  YR
Sbjct: 1260 DEGWQAANLRGRSANVRKKSSRRRPALTKLMVDRLEDGR-TGSAYR 1304


>01_01_0051 + 389051-389623
          Length = 190

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 152 SPEEPSTSAVPVMSECSGAGWW 217
           SP  PS+S+    S  SG+ WW
Sbjct: 161 SPSPPSSSSTSSSSSSSGSSWW 182


>06_03_0325 + 19600379-19600454,19601686-19601873,19602113-19602226
          Length = 125

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -2

Query: 317 GISGLESKVLAGGG*RLLCEG-SCSASPLGD--ERYTTTPRPNIPTSPVLRTW 168
           G++ +      GGG   +  G SCS++   D    ++T+ R  +PT P+ R W
Sbjct: 17  GVTTIAGSDACGGGKNTISVGFSCSSTYSADLYMPFSTSVRLALPTGPLQRMW 69


>03_05_0327 -
           23154014-23154942,23155169-23155316,23155606-23156622,
           23156753-23157217,23160258-23161247
          Length = 1182

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 454 STHIELQNVDQDDISASDTVVV 519
           +TH  LQ++DQ DIS S++  +
Sbjct: 807 ATHSALQDIDQTDISTSESTTI 828


>01_06_1509 -
           37855894-37856679,37856766-37856952,37857508-37857580,
           37857772-37857816,37858004-37858010
          Length = 365

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 617 T*PPSRSKLC-GTDNSPVSISDSCEYVCCERTEQ 519
           T P +   +C G+ + P+++ D C    C RTE+
Sbjct: 59  TTPRTEQHVCNGSSSQPINVGDDCNVGDCVRTEK 92


>01_06_0005 -
           25514039-25514137,25514508-25514570,25514937-25515047,
           25515843-25516103,25516293-25516338,25516504-25516904
          Length = 326

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -3

Query: 232 GMSDTPPPRARTFRHHRYCGRGGFLWRHHGLRH 134
           G+    PPR R  R HR  GRG       GLRH
Sbjct: 22  GLGRASPPRLRFRRRHRAAGRG------RGLRH 48


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 226 SSPSGDALHDPSHNNRYPPPANTFDSKPEIPF 321
           SSP  D  HDP H   +  P +  D  P+  F
Sbjct: 132 SSPPDDVDHDPDHRYVFSSPHDDVDHDPDQVF 163


>01_01_0426 +
           3234987-3235935,3236744-3236782,3237044-3237409,
           3240871-3242315
          Length = 932

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 208 GVVVYRSSPSGDALHDPSHN-NRYPPPANTFDSKPEIPFLTFTI 336
           G V+  S+PS  + H   H   R PP       + +IP L FT+
Sbjct: 418 GAVIAGSTPSAGSRHHRDHAIRREPPSPGAATMQGKIPQLLFTL 461


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,124,364
Number of Sequences: 37544
Number of extensions: 490935
Number of successful extensions: 1877
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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