BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30604 (645 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0275 + 8478374-8478706 33 0.19 06_03_0335 + 19662933-19663334,19663358-19664023 30 1.4 11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 30 1.8 09_04_0021 - 13861369-13861538,13862274-13862432,13862493-138627... 30 1.8 11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 29 2.4 06_03_0509 + 21613541-21613837 29 2.4 06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 29 2.4 12_02_1209 - 27019724-27020040,27020690-27020945 29 4.2 11_06_0183 - 20999343-20999865,21000351-21000748 29 4.2 08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 29 4.2 06_03_0854 + 25400855-25403741,25406174-25407708 28 5.5 03_02_0915 + 12360079-12360095,12360225-12361353 28 5.5 11_04_0008 + 12115147-12115354,12115397-12116130 28 7.3 04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 28 7.3 01_01_0051 + 389051-389623 28 7.3 06_03_0325 + 19600379-19600454,19601686-19601873,19602113-19602226 27 9.7 03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 27 9.7 01_06_1509 - 37855894-37856679,37856766-37856952,37857508-378575... 27 9.7 01_06_0005 - 25514039-25514137,25514508-25514570,25514937-255150... 27 9.7 01_05_0560 - 23288078-23288370,23288448-23288733 27 9.7 01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324... 27 9.7 >02_02_0275 + 8478374-8478706 Length = 110 Score = 33.1 bits (72), Expect = 0.19 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +2 Query: 68 ISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAVPVMSECSG 205 +SV+ DRCP H R +A A P P A P + SG Sbjct: 27 VSVSGDRCPVLHHHRRLHDMVAAAVVSQPPPRPPPPAAPAAARTSG 72 >06_03_0335 + 19662933-19663334,19663358-19664023 Length = 355 Score = 30.3 bits (65), Expect = 1.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 Query: 219 HHHPAPEHSDITGTADVEGSSGD 151 HHH +H D+ A V GSSGD Sbjct: 216 HHHRRTDHVDVVEVAVVTGSSGD 238 >11_06_0189 - 21039217-21039348,21039480-21039738,21039841-21040004, 21040371-21040533,21040615-21042137 Length = 746 Score = 29.9 bits (64), Expect = 1.8 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 11/78 (14%) Frame = +1 Query: 367 QPAXMTDGEQLV----QLPDNVTIK--LRVHAH----PHSTHIELQNVDQDDISASDTVV 516 QP M + Q+ Q+P N ++ + V H PH + ++Q+ ++ ++ Sbjct: 196 QPFYMDEQSQMYAPYQQIPSNFLLQHDMDVQNHSSMQPHYVYPQMQHAAGSNVRSNQQAA 255 Query: 517 VC-SVRSQHTYSHESLID 567 C S R + TY H+ L+D Sbjct: 256 ACTSARGRSTYGHQLLLD 273 >09_04_0021 - 13861369-13861538,13862274-13862432,13862493-13862720, 13864057-13864246 Length = 248 Score = 29.9 bits (64), Expect = 1.8 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = +3 Query: 363 VSAGXDDGWRATRAAARQRNDKAASARAPALNAHRTAERRSGRYIGQR 506 V+A D GW AAA +R + +AR A A TA R QR Sbjct: 4 VAAPEDSGWLVGGAAATRRRGRLCAARGEARVAELTATMAGRRKARQR 51 >11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 Length = 158 Score = 29.5 bits (63), Expect = 2.4 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 399 RAAARQRNDKAASAR-APALNAHRTAERRSGRYIGQRYRRRLFGAFATHIFARVTNR 566 RAA R++ ++ A R A R A RR R G+R RRR G F + +V R Sbjct: 89 RAAGRRKEEEEAGRRKAGEETRRRGAGRRKRRRGGRRRRRRRRGRFLYSPYWKVDTR 145 >06_03_0509 + 21613541-21613837 Length = 98 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 390 RATRAAARQRNDKAASARAPALNAHRTAERRSGRYIGQRYRRR 518 R+ R+AA ++AASAR + +RRSG G+R RRR Sbjct: 51 RSRRSAAAAAKEEAASARWRKRSGAVGRKRRSGVVGGKRKRRR 93 >06_02_0364 + 15178583-15178881,15179652-15179723,15179853-15179917, 15180890-15180934,15182493-15183170,15183376-15183410, 15183647-15183736,15183896-15183985,15184164-15184262, 15184938-15185013,15185473-15185588 Length = 554 Score = 29.5 bits (63), Expect = 2.4 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -2 Query: 221 YTTTPRPNIPTSPVLRTWRVPLATSWVAPQLKYASCGCARRTAGSGR 81 + +TPRP P P R R PLA+ + + C CA ++ SGR Sbjct: 7 FLSTPRPPPPLVPAHR--RRPLASRSGLRRREGCPCSCASSSSSSGR 51 >12_02_1209 - 27019724-27020040,27020690-27020945 Length = 190 Score = 28.7 bits (61), Expect = 4.2 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +3 Query: 393 ATRAAARQRNDKAASARAPALNAHRTAERRSGR 491 A AAA +R+D+ AS+RA +L A R A RS R Sbjct: 19 AAAAAAARRDDEGASSRAASLAASRVA--RSAR 49 >11_06_0183 - 20999343-20999865,21000351-21000748 Length = 306 Score = 28.7 bits (61), Expect = 4.2 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +1 Query: 271 RYPPPANTFDSKPEIPFLTFTIVHDDGNKEWCQPAXMTDGEQLVQLPDNVTIKLRVHAH- 447 R PPP D+KP P ++ + + G + M DG ++V L D+ + +H Sbjct: 153 RPPPPPADDDAKPAEPRVSLSALSVVGGDNTMRLPVMIDGLRVVSLIDSGSTHNFIHTEL 212 Query: 448 PHSTHIELQNV 480 H + L+ V Sbjct: 213 AHHLRLRLEPV 223 >08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831, 901912-902016,902245-902391,903273-903354,903445-903786, 903873-904177,904259-904435,904799-904852,905171-905254, 905855-905968,906048-906321,907552-907926,908003-908267, 908352-908538,908615-909052,909895-909966,910037-910630, 911471-911623,911700-911828,912326-912657,912705-912840, 913046-913491,913580-915087,915169-915431,915622-915738, 915844-916014,916743-916845,916930-916988,918360-918461, 918560-918649,918727-918877,919745-919830,919926-920102, 920915-920978,921859-922008,923132-923211,923311-923376, 924540-924747,925502-925575,925761-925848,926140-926312, 926541-926609,926698-926741,927074-927167,927290-927366, 927475-927552,927992-928085 Length = 3314 Score = 28.7 bits (61), Expect = 4.2 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 475 NVDQDDISASDTVVVCSVRSQHTYSHESLIDTGELSVPQSLDRL 606 N Q+ ++AS TV+ S+ S + HES LSVP+S+ L Sbjct: 1099 NSSQNSMNASLTVLDLSLVSVRVHFHESCGILATLSVPESIAAL 1142 >06_03_0854 + 25400855-25403741,25406174-25407708 Length = 1473 Score = 28.3 bits (60), Expect = 5.5 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Frame = -2 Query: 269 LLCEGSCSASPLGDE-RYTTTPRPNIPTSPVLRTWRVPLATSWVAPQLKYASCGCARRTA 93 L G+ + P+ + T +P PVL V +AT + Y + CA TA Sbjct: 1412 LAASGAAAPPPVPAKLELATAAATTLPEKPVLTAHEVVMATLFPNGVFSYIAIACATATA 1471 Query: 92 G 90 G Sbjct: 1472 G 1472 >03_02_0915 + 12360079-12360095,12360225-12361353 Length = 381 Score = 28.3 bits (60), Expect = 5.5 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Frame = -2 Query: 356 LLPSSCTIVKVRNGISGLESKVLAG-GG*RLLCEGSCSASPLGDERYTTTPRPNIPTSPV 180 L+PS CT+V VR ++G ++ + + + +G +S D T+T Sbjct: 26 LIPSGCTVV-VRRRVAGPPAETIVELTTKKPMSQGGGGSS--SDSGATSTGAEVDDEEKA 82 Query: 179 LRTWRVPLATSWVAPQLKYASCGCARRTAGSGRVPPRSSICLR 51 + W AP + C R A +GR PP +C R Sbjct: 83 ISAVIDAAQLKWEAPTSQGGHC-YGHRGAHAGRAPPAGYVCHR 124 >11_04_0008 + 12115147-12115354,12115397-12116130 Length = 313 Score = 27.9 bits (59), Expect = 7.3 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -3 Query: 181 YCGRGGFLWRHHGLRHS*SMPRAVVHDELRAAVACHR 71 Y GRGG +WR H L A+V +LR AC R Sbjct: 40 YLGRGGPMWRGHELPR--RSATAMVAADLRRRGACWR 74 >04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393, 32870640-32870761,32873139-32873167,32873586-32873891, 32873977-32874035,32874148-32874279,32874414-32874455, 32874560-32875093,32875189-32875379,32875538-32876027, 32876273-32876335,32876704-32876805,32876895-32877215, 32877294-32877386,32877484-32877585,32877718-32877822, 32877933-32878066,32878429-32878612,32879226-32879357, 32879447-32879559,32879628-32879709,32880328-32881992 Length = 1746 Score = 27.9 bits (59), Expect = 7.3 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +3 Query: 378 DDGWRATRAAARQRN-DKAASARAPALNAHRTAERRSGRYIGQRYR 512 D+GW+A R N K +S R PAL GR G YR Sbjct: 1260 DEGWQAANLRGRSANVRKKSSRRRPALTKLMVDRLEDGR-TGSAYR 1304 >01_01_0051 + 389051-389623 Length = 190 Score = 27.9 bits (59), Expect = 7.3 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +2 Query: 152 SPEEPSTSAVPVMSECSGAGWW 217 SP PS+S+ S SG+ WW Sbjct: 161 SPSPPSSSSTSSSSSSSGSSWW 182 >06_03_0325 + 19600379-19600454,19601686-19601873,19602113-19602226 Length = 125 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = -2 Query: 317 GISGLESKVLAGGG*RLLCEG-SCSASPLGD--ERYTTTPRPNIPTSPVLRTW 168 G++ + GGG + G SCS++ D ++T+ R +PT P+ R W Sbjct: 17 GVTTIAGSDACGGGKNTISVGFSCSSTYSADLYMPFSTSVRLALPTGPLQRMW 69 >03_05_0327 - 23154014-23154942,23155169-23155316,23155606-23156622, 23156753-23157217,23160258-23161247 Length = 1182 Score = 27.5 bits (58), Expect = 9.7 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +1 Query: 454 STHIELQNVDQDDISASDTVVV 519 +TH LQ++DQ DIS S++ + Sbjct: 807 ATHSALQDIDQTDISTSESTTI 828 >01_06_1509 - 37855894-37856679,37856766-37856952,37857508-37857580, 37857772-37857816,37858004-37858010 Length = 365 Score = 27.5 bits (58), Expect = 9.7 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 617 T*PPSRSKLC-GTDNSPVSISDSCEYVCCERTEQ 519 T P + +C G+ + P+++ D C C RTE+ Sbjct: 59 TTPRTEQHVCNGSSSQPINVGDDCNVGDCVRTEK 92 >01_06_0005 - 25514039-25514137,25514508-25514570,25514937-25515047, 25515843-25516103,25516293-25516338,25516504-25516904 Length = 326 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -3 Query: 232 GMSDTPPPRARTFRHHRYCGRGGFLWRHHGLRH 134 G+ PPR R R HR GRG GLRH Sbjct: 22 GLGRASPPRLRFRRRHRAAGRG------RGLRH 48 >01_05_0560 - 23288078-23288370,23288448-23288733 Length = 192 Score = 27.5 bits (58), Expect = 9.7 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +1 Query: 226 SSPSGDALHDPSHNNRYPPPANTFDSKPEIPF 321 SSP D HDP H + P + D P+ F Sbjct: 132 SSPPDDVDHDPDHRYVFSSPHDDVDHDPDQVF 163 >01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409, 3240871-3242315 Length = 932 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +1 Query: 208 GVVVYRSSPSGDALHDPSHN-NRYPPPANTFDSKPEIPFLTFTI 336 G V+ S+PS + H H R PP + +IP L FT+ Sbjct: 418 GAVIAGSTPSAGSRHHRDHAIRREPPSPGAATMQGKIPQLLFTL 461 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,124,364 Number of Sequences: 37544 Number of extensions: 490935 Number of successful extensions: 1877 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1876 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1596695220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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