Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30604
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 31 0.70
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 30 1.6
Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical pr... 29 2.1
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 29 2.1
L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death prot... 29 2.1
AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3... 29 2.1
AC084155-3|AAY86295.1| 129|Caenorhabditis elegans Hypothetical ... 29 2.1
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.8
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 29 2.8
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 29 2.8
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 29 2.8
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 2.8
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.7
U88314-6|AAF99886.1| 240|Caenorhabditis elegans Hypothetical pr... 28 4.9
U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.9
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 28 4.9
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 28 6.5
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 6.5
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF039711-6|AAB96706.1| 67|Caenorhabditis elegans Hypothetical ... 28 6.5
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 6.5
Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 8.6
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 11 NRESVPIVITQIKHEDRWMISVARDRCPQFVVHNRTRHTLAV 136
+R +V V+ I H +R+ V D C F +HNR +H +A+
Sbjct: 325 DRLNVNNVLECITHAERYNTDVLYDACVDFAIHNR-QHVMAL 365
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 217 VYRSSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFTIVHDDGNK 357
+ RS+ A +P + + PPP + + KP F+ +++ HD G+K
Sbjct: 597 IIRSAGGQAAAREPIIDEKDPPPYHNANLKPN--FVLYSLTHDIGDK 641
>Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical
protein C48D1.2 protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +1
Query: 166 LHVRSTGDVGMFGRGVVVY---RSSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFT 333
+H S V F +Y RS ALH +N PP N F S+P +FT
Sbjct: 128 VHRDSVSSVSSFTSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFT 186
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 11 NRESVPIVITQIKHEDRWMISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAVPVM 190
+R+SV V + ++D + S AR R +H+ RH + P +PS SA
Sbjct: 129 HRDSVSSVSSFTSYQD--IYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPS-SANSSF 185
Query: 191 SECSGAGW 214
+ CS G+
Sbjct: 186 TGCSSLGY 193
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = -2
Query: 599 SKLCGTDNSPVSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTRSFIV 420
+K CG + V+ D CE C T V L S+ C+E C C + F+
Sbjct: 18 NKTCGANEEMVACHDHCETQC----GYTPKVCL----------SAQCIENACDCKKGFVR 63
Query: 419 TLSGSCTSCS 390
G C S
Sbjct: 64 NSLGKCVDIS 73
>L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death protein
protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +1
Query: 166 LHVRSTGDVGMFGRGVVVY---RSSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFT 333
+H S V F +Y RS ALH +N PP N F S+P +FT
Sbjct: 128 VHRDSVSSVSSFTSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFT 186
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 11 NRESVPIVITQIKHEDRWMISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAVPVM 190
+R+SV V + ++D + S AR R +H+ RH + P +PS SA
Sbjct: 129 HRDSVSSVSSFTSYQD--IYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPS-SANSSF 185
Query: 191 SECSGAGW 214
+ CS G+
Sbjct: 186 TGCSSLGY 193
>AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3
protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +1
Query: 166 LHVRSTGDVGMFGRGVVVY---RSSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFT 333
+H S V F +Y RS ALH +N PP N F S+P +FT
Sbjct: 128 VHRDSVSSVSSFTSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFT 186
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 11 NRESVPIVITQIKHEDRWMISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAVPVM 190
+R+SV V + ++D + S AR R +H+ RH + P +PS SA
Sbjct: 129 HRDSVSSVSSFTSYQD--IYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPS-SANSSF 185
Query: 191 SECSGAGW 214
+ CS G+
Sbjct: 186 TGCSSLGY 193
>AC084155-3|AAY86295.1| 129|Caenorhabditis elegans Hypothetical
protein Y45G5AM.4 protein.
Length = 129
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 399 RAAAR---QRNDKAASARAPALNAHRTAERRSGRYIGQRYRRRLFGAFATHIFARVTNRH 569
RAA R + D RA H+ AE+ R + ++ RLFG F ++ R+T H
Sbjct: 70 RAADRLKVSKEDVQKGCRASYDKLHKLAEKGRSRPVS--WKTRLFGCFRRNVHDRITYEH 127
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -2
Query: 569 VSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTRSFIVTLSGSCTSCS 390
VS S CE C + +Q L I +T C+ C + A + + ++ S SCS
Sbjct: 496 VSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACTQSCSQSCSAAQPAQMPCITQSANSCS 555
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 126 VCLVRLCTTNCGQRSRATEIIHLSSCFI 43
+C LC +C QR A +I L+ CF+
Sbjct: 365 ICFGLLCLCDCSQRGAAIFLICLAMCFV 392
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 629 WSNFT*PPSRSKLCGTDNSPVSISDSCEYVCCE 531
W++ P +++CGT S V +D CE + E
Sbjct: 320 WNSLQAPALLNEICGTSTSRVHFNDKCERIGVE 352
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 629 WSNFT*PPSRSKLCGTDNSPVSISDSCEYVCCE 531
W++ P +++CGT S V +D CE + E
Sbjct: 320 WNSLQAPALLNEICGTSTSRVHFNDKCERIGVE 352
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +1
Query: 412 DNVTIKLRVHAHPHSTHIELQNVDQDDISASDTVVVCSVRSQHTYSHESLIDTGELSVPQ 591
D + VH HP TH +L N + + S + S H + + +T E + +
Sbjct: 282 DRKLTTMSVHQHPRHTHQQLPNKTTNGQTLSPCIFCSSTSHVHRHEECPIFNTAEARIQK 341
Query: 592 S 594
+
Sbjct: 342 A 342
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 476 FCSSMCVECGCACTRSFIVTLSGSCTS 396
FC +C GC C F SG C +
Sbjct: 394 FCPQVCTGGGCVCQEGFFRDNSGKCVT 420
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -2
Query: 611 PPSRSKLCGTDNSPVSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTR 432
P S+ CGT+ P + C C E+ L + C C + GC+C +
Sbjct: 156 PAIGSQTCGTNEEP----NQCHNACFEKKCPVKPQPLVN-------CMEKC-DIGCSCKK 203
Query: 431 SFIVTLSGSCTS 396
F+ G C +
Sbjct: 204 GFLRNRQGQCVN 215
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -2
Query: 611 PPSRSKLCGTDNSPVSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTR 432
P S+ CGT+ P + C C E+ L + C C + GC+C +
Sbjct: 156 PAIGSQTCGTNEEP----NQCHNACFEKKCPVKPQPLVN-------CMEKC-DIGCSCKK 203
Query: 431 SFIVTLSGSCTS 396
F+ G C +
Sbjct: 204 GFLRNRQGQCVN 215
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -2
Query: 611 PPSRSKLCGTDNSPVSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTR 432
P S+ CGT+ P + C C E+ L + C C + GC+C +
Sbjct: 156 PAIGSQTCGTNEEP----NQCHNACFEKKCPVKPQPLVN-------CMEKC-DIGCSCKK 203
Query: 431 SFIVTLSGSCTS 396
F+ G C +
Sbjct: 204 GFLRNRQGQCVN 215
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 476 FCSSMCVECGCACTRSFIVTLSGSCTS 396
FC +C GC C F SG C +
Sbjct: 499 FCPQVCTGGGCVCQEGFFRDNSGKCVT 525
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 SSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFTIVHDDGNKE 360
S+ S D S + + PP N EIP +T +V DG +E
Sbjct: 1099 STDSSDTSFSHSSKDLFSPPTNPQTYDYEIPAVTPALVDSDGEEE 1143
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 SSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFTIVHDDGNKE 360
S+ S D S + + PP N EIP +T +V DG +E
Sbjct: 1099 STDSSDTSFSHSSKDLFSPPTNPQTYDYEIPAVTPALVDSDGEEE 1143
>U88314-6|AAF99886.1| 240|Caenorhabditis elegans Hypothetical
protein C46H11.7 protein.
Length = 240
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 596 KLCGTDNSPVSISDSCEYVCCERTEQTTTVSLADISS*STFCSSMCVECGCACTR---SF 426
+ CG NS + S SC + T + + A + + S + + M +C C R S
Sbjct: 124 RTCGRCNSTTTSSTSCADLVNPSTGVSDCTARASLCNDSVYYAVMTQQCPRTCGRCNSSS 183
Query: 425 IVTLSGSCTSCSPSV 381
VT S S T+ + V
Sbjct: 184 TVTSSSSTTASTTCV 198
>U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical
protein R13A1.8 protein.
Length = 342
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 379 MTDGEQLVQLPDNVTIKLRVHAHPHSTHIELQNVDQDDISASDTV 513
+++ + + LPDN ++ HI ++NVD+ + + TV
Sbjct: 210 LSESDDVFDLPDNHPVRRHARLFTSILHISVKNVDELEAQVAPTV 254
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 313 FPAWSQKC*PAEGSDCCARGRVVRHRLGMSDTPPPRAR 200
FP W + C S CC G +V + + D+ P A+
Sbjct: 450 FPTWCRSCCIGVCSTCCNIGAIVAPHIFLIDSAAPGAQ 487
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 482 STFCSSMCVECGCACTRSFIVTLSGSCTS 396
+T+C C C T + SG+CTS
Sbjct: 6 NTYCQRTCGRCPSTTTSGSVTVTSGTCTS 34
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 145 HDVARGTLHVRSTGDVGMFGRGVVVYR--SSPS-GDALHDPSHNNRYPP 282
H + G++ S G G G V Y + PS G + H P H+ +YPP
Sbjct: 1325 HMMNPGSVGPGSVGGPGSVNPGSVGYPQWNPPSVGQSYHHPLHHQQYPP 1373
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 145 HDVARGTLHVRSTGDVGMFGRGVVVYR--SSPS-GDALHDPSHNNRYPP 282
H + G++ S G G G V Y + PS G + H P H+ +YPP
Sbjct: 1319 HMMNPGSVGPGSVGGPGSVNPGSVGYPQWNPPSVGQSYHHPLHHQQYPP 1367
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 145 HDVARGTLHVRSTGDVGMFGRGVVVYR--SSPS-GDALHDPSHNNRYPP 282
H + G++ S G G G V Y + PS G + H P H+ +YPP
Sbjct: 1325 HMMNPGSVGPGSVGGPGSVNPGSVGYPQWNPPSVGQSYHHPLHHQQYPP 1373
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 145 HDVARGTLHVRSTGDVGMFGRGVVVYR--SSPS-GDALHDPSHNNRYPP 282
H + G++ S G G G V Y + PS G + H P H+ +YPP
Sbjct: 1319 HMMNPGSVGPGSVGGPGSVNPGSVGYPQWNPPSVGQSYHHPLHHQQYPP 1367
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 68 ISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAV 181
+S RD+ + + N T++TLA Q MM E+ A+
Sbjct: 227 LSDLRDKVKEIEIFNETQNTLAEGQKMMRKEQIEKEAL 264
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 68 ISVARDRCPQFVVHNRTRHTLAVAQPMMSPEEPSTSAV 181
+S RD+ + + N T++TLA Q MM E+ A+
Sbjct: 227 LSDLRDKVKEIEIFNETQNTLAEGQKMMRKEQIEKEAL 264
>AF039711-6|AAB96706.1| 67|Caenorhabditis elegans Hypothetical
protein F49D11.7 protein.
Length = 67
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 196 MFGRGVVVYRSSPSGDALHDPSHNNRYPP 282
M+G G Y SP GD + P++ Y P
Sbjct: 1 MYGPGYAPYYGSPYGDPCYGPAYGPAYGP 29
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 218 TTTPRPNIPTSPVLRTWRVP 159
TTTPRP +PT P RT VP
Sbjct: 358 TTTPRPTVPTVP--RTTTVP 375
>Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical
protein F35E8.9 protein.
Length = 248
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 536 CERTEQTTTVSLADISS*STFCSSMCVECGCACTRSFIVTLSGSCTS 396
C+RT S +SS S CSS + AC R++ +L+G CT+
Sbjct: 186 CQRTCNRCASSTTTLSSSSLTCSSYIADSSTAC-RAW--SLNGFCTN 229
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 224 RYTTTPRPNIPTSPVLRTWRVPLATSWVAP 135
R TTTPRP P+ R WR P T P
Sbjct: 3 RITTTPRPWQPSGAATRIWR-PEVTENTGP 31
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 224 RYTTTPRPNIPTSPVLRTWRVPLATSWVAP 135
R TTTPRP P+ R WR P T P
Sbjct: 3 RITTTPRPWQPSGAATRIWR-PEVTENTGP 31
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = -2
Query: 578 NSPVSISDSCEYVCCERTEQTTTVS------LADISS*STFCSSMCVECGCACTRSFIVT 417
N+ VS + YV C + T ++ ++++S CSS C + V
Sbjct: 82 NNAVSQPSTIGYVECSQNNPTNCITGYQCVQSSNVASTFLCCSSSISTSSCPSDFTPAVG 141
Query: 416 LSGSCTSCSPSV 381
+G SCSPSV
Sbjct: 142 SNGGTVSCSPSV 153
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 229 SPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFTIVHDDGNK 357
+PS H SH P + + S P P L F GNK
Sbjct: 389 TPSHPRKHKKSHRQFVVKPTDLWSSGPSQPLLVFVNPKSGGNK 431
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +1
Query: 223 RSSPSGDALHDPSHNNRYPPPANTFDSKPEIPFLTFTIVHDDGNKEWCQPAXMTDGEQLV 402
R SP+ L++PS +N+ P + ++ P + + H+ KE P + E V
Sbjct: 1154 RKSPTEMDLYNPSRDNQESPVMSETEAIPIVDRIDLEAYHNSPTKESTSPVTVNPVEVRV 1213
Query: 403 QLPDNVTIKLRVHAHPH 453
D V L A PH
Sbjct: 1214 S-ADEVAEHL---ASPH 1226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,848,209
Number of Sequences: 27780
Number of extensions: 366798
Number of successful extensions: 1330
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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