Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30600
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   6.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 252 IPSHCHFYSQPSTSANQYRRSSIGSTVLVYQDNPTS 145
           +P H   +S P T +  + +  +  TV ++  +P+S
Sbjct: 412 LPEHVIMWSSPLTESPYFEKLDVKVTVQLWLGDPSS 447


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -2

Query: 231 YSQPSTSANQYRRSSIGSTVLVYQDN 154
           + +PS+S+NQ + ++  + + V QD+
Sbjct: 310 FEKPSSSSNQEKTTTESAKISVIQDD 335


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 82  LNISAQSCVC*YVLS 126
           LN+S   C+C Y+ S
Sbjct: 41  LNLSINYCICGYIFS 55


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 93  CSIMRVLICFVVAFASLQTLDCLD 164
           CS  +  + + + F ++ TL C++
Sbjct: 30  CSFPKKKLVYCIIFGAIATLTCIE 53


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 93  CSIMRVLICFVVAFASLQTLDCLD 164
           CS  +  + + + F ++ TL C++
Sbjct: 26  CSFPKKKLVYCIIFGAIATLTCIE 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,088
Number of Sequences: 336
Number of extensions: 3573
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)