BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30598 (736 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844... 87 1e-17 01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855 86 2e-17 08_02_0094 + 12277756-12278574,12280314-12280418,12280487-122805... 32 0.54 07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 31 0.95 12_02_0451 - 19179592-19179648,19179745-19179879,19180214-191802... 29 5.1 01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 28 6.7 >04_04_0407 - 24983491-24983575,24983655-24984015,24984367-24984406, 24984466-24984468 Length = 162 Score = 87.4 bits (207), Expect = 1e-17 Identities = 41/72 (56%), Positives = 51/72 (70%) Frame = -2 Query: 468 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 289 +ALKA + V G K +KIR SV F RPKT + R PKYPR S P RN++D Y I+K+ Sbjct: 26 QALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKY 85 Query: 288 PLTSEAAMKKIE 253 PLT+E+AMKKIE Sbjct: 86 PLTTESAMKKIE 97 Score = 77.0 bits (181), Expect = 1e-14 Identities = 41/65 (63%), Positives = 43/65 (66%) Frame = -1 Query: 253 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXAN 74 DNNTLVFIV A+K IKAAVKK+YDI KVNTLIRPDGKKK AN Sbjct: 98 DNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVAN 157 Query: 73 KIGII 59 KIGII Sbjct: 158 KIGII 162 >01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855 Length = 152 Score = 86.2 bits (204), Expect = 2e-17 Identities = 41/80 (51%), Positives = 53/80 (66%) Frame = -2 Query: 492 KKVVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 313 KK +ALK + V G ++ +KIR SV F RPKT + R PKYPR S P RN++ Sbjct: 8 KKADGKTQQALKVAKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNKL 67 Query: 312 DAYNIIKFPLTSEAAMKKIE 253 D Y I+K+PLT+E+AMKKIE Sbjct: 68 DQYQILKYPLTTESAMKKIE 87 Score = 77.0 bits (181), Expect = 1e-14 Identities = 41/65 (63%), Positives = 43/65 (66%) Frame = -1 Query: 253 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXAN 74 DNNTLVFIV A+K IKAAVKK+YDI KVNTLIRPDGKKK AN Sbjct: 88 DNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVAN 147 Query: 73 KIGII 59 KIGII Sbjct: 148 KIGII 152 >08_02_0094 + 12277756-12278574,12280314-12280418,12280487-12280543, 12280969-12281041,12281525-12281703,12281788-12281961, 12282041-12282326,12282433-12282509,12282599-12282668, 12282751-12282822,12282920-12283155,12283240-12283374, 12283466-12283761,12284237-12284408,12284510-12284608, 12284704-12284835,12284950-12285050,12285426-12285615, 12285723-12285761 Length = 1103 Score = 31.9 bits (69), Expect = 0.54 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 283 HV*SSNEED*DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 137 +V S + D + + L+ +H H IK +KK YD + +K +I+P Sbjct: 286 NVDSESSSDSELDDLILRMHRKEVVHEIKRHLKKSYDFHTSKCTLIIKP 334 >07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759, 4209742-4209794,4209966-4210120,4210201-4210528, 4210618-4210730,4211394-4211538,4211951-4212259, 4212340-4212420,4212989-4213349 Length = 589 Score = 31.1 bits (67), Expect = 0.95 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -2 Query: 441 VKGEHGKRVRKIR-NSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYN 301 +KGE K++R+ NS +R KT +PP H K +K K D+Y+ Sbjct: 140 LKGEKEKKLRRTEDNSAAEKRVKTQKPPTHDKQKKKR--KHYSSDSYS 185 >12_02_0451 - 19179592-19179648,19179745-19179879,19180214-19180247, 19180347-19180423,19180523-19180598,19180792-19180925, 19181772-19181878,19182505-19182808,19182913-19183218 Length = 409 Score = 28.7 bits (61), Expect = 5.1 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 588 GCGNSSQNCQTQASSFQIEDCTEAQKDGIKGQKKVVKPVTK 466 GC NSS+NC T + Q T+ K I +K+ K V K Sbjct: 87 GCANSSKNCTTTSKLQQKSKPTQRVKQ-IPSKKQCAKKVPK 126 >01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471, 9702578-9702665,9703027-9703095,9703224-9703281, 9703895-9703996,9704075-9704179,9704273-9704624, 9706005-9706100,9706427-9706501,9707192-9707370, 9707501-9707740,9707922-9708017,9708193-9708306, 9708428-9708527 Length = 614 Score = 28.3 bits (60), Expect = 6.7 Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -2 Query: 522 EAQKDGIKGQKKVVKPVTKALKAQRKVV-KGEHGKRVRK 409 EA+ +KG++K+++ + L Q+K++ K E +R+RK Sbjct: 162 EAELAKLKGEEKILQGLVDKLTEQKKLIEKAEEEERLRK 200 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,164,018 Number of Sequences: 37544 Number of extensions: 285646 Number of successful extensions: 737 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 717 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 736 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1933531792 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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