Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30596
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex compone...    46   9e-05
BC020650-1|AAH20650.1|  488|Homo sapiens EXOC1 protein protein.        46   9e-05
AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens ...    46   9e-05
AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens ...    46   9e-05
BC064403-1|AAH64403.1|  845|Homo sapiens hypothetical protein BC...    30   8.7  
BC021250-1|AAH21250.2|  844|Homo sapiens LOC90826 protein protein.     30   8.7  

>BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex component
           1 protein.
          Length = 894

 Score = 46.4 bits (105), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFI 97
           L  LY+ V+KHL EE  LLQVVW +MQ+EFI
Sbjct: 825 LDNLYKKVDKHLCEEENLLQVVWHSMQDEFI 855



 Score = 34.7 bits (76), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 105 RRFAGARGWCYPAAGLALPLSTDDILDALSDIARQH 212
           + F G    CYP +G+ +  +  DILD  S IA+ H
Sbjct: 859 KHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 894


>BC020650-1|AAH20650.1|  488|Homo sapiens EXOC1 protein protein.
          Length = 488

 Score = 46.4 bits (105), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFI 97
           L  LY+ V+KHL EE  LLQVVW +MQ+EFI
Sbjct: 419 LDNLYKKVDKHLCEEENLLQVVWHSMQDEFI 449



 Score = 34.7 bits (76), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 105 RRFAGARGWCYPAAGLALPLSTDDILDALSDIARQH 212
           + F G    CYP +G+ +  +  DILD  S IA+ H
Sbjct: 453 KHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 488


>AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14507 fis, clone NT2RM1000399. ).
          Length = 879

 Score = 46.4 bits (105), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFI 97
           L  LY+ V+KHL EE  LLQVVW +MQ+EFI
Sbjct: 810 LDNLYKKVDKHLCEEENLLQVVWHSMQDEFI 840



 Score = 34.7 bits (76), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 105 RRFAGARGWCYPAAGLALPLSTDDILDALSDIARQH 212
           + F G    CYP +G+ +  +  DILD  S IA+ H
Sbjct: 844 KHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 879


>AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10893 fis, clone NT2RP4002791. ).
          Length = 894

 Score = 46.4 bits (105), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFI 97
           L  LY+ V+KHL EE  LLQVVW +MQ+EFI
Sbjct: 825 LDNLYKKVDKHLCEEENLLQVVWHSMQDEFI 855



 Score = 34.7 bits (76), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 105 RRFAGARGWCYPAAGLALPLSTDDILDALSDIARQH 212
           + F G    CYP +G+ +  +  DILD  S IA+ H
Sbjct: 859 KHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 894


>BC064403-1|AAH64403.1|  845|Homo sapiens hypothetical protein
           BC004337 protein.
          Length = 845

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
 Frame = -1

Query: 590 YIFVLSLAPSIRHN--QDFAHSLPTW---LSCIATI-DLVKAFNQ-IPVFEDD 453
           Y+ VLSLAP ++H+  + F ++L  W   L  ++ I DL+  + Q + +F DD
Sbjct: 48  YLLVLSLAPELKHDVKETFQYTLFRWAEELDALSRIQDLLGCYEQALELFPDD 100


>BC021250-1|AAH21250.2|  844|Homo sapiens LOC90826 protein protein.
          Length = 844

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
 Frame = -1

Query: 590 YIFVLSLAPSIRHN--QDFAHSLPTW---LSCIATI-DLVKAFNQ-IPVFEDD 453
           Y+ VLSLAP ++H+  + F ++L  W   L  ++ I DL+  + Q + +F DD
Sbjct: 47  YLLVLSLAPELKHDVKETFQYTLFRWAEELDALSRIQDLLGCYEQALELFPDD 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,632,517
Number of Sequences: 237096
Number of extensions: 1479419
Number of successful extensions: 3988
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3986
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)