BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30596 (677 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 55 8e-08 AY061578-1|AAL29126.1| 889|Drosophila melanogaster SD02883p pro... 54 2e-07 AE014296-2904|AAF49347.2| 889|Drosophila melanogaster CG3885-PA... 54 2e-07 AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 53 4e-07 AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 52 1e-06 X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 51 2e-06 AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 51 2e-06 AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 50 2e-06 AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 50 2e-06 AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 50 4e-06 AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 50 4e-06 X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 48 1e-05 AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 48 2e-05 U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 44 3e-04 AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 43 3e-04 X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 43 4e-04 AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 43 4e-04 AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 43 4e-04 X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 42 8e-04 M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 42 8e-04 EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 42 8e-04 EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 42 8e-04 DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 42 8e-04 DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 42 8e-04 AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 42 8e-04 Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 37 0.029 AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 37 0.029 M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 35 0.12 AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 35 0.12 AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 35 0.12 AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 33 0.27 X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 31 1.4 AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 31 1.4 BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p pro... 30 3.3 >AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein protein. Length = 1006 Score = 55.2 bits (127), Expect = 8e-08 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339 TIDL+K F+QI + + IPKTA TT G +E+ M GL+NA TFQ + D RP Sbjct: 247 TIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLRP 302 >AY061578-1|AAL29126.1| 889|Drosophila melanogaster SD02883p protein. Length = 889 Score = 54.0 bits (124), Expect = 2e-07 Identities = 25/32 (78%), Positives = 26/32 (81%) Frame = +2 Query: 5 LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100 L LY+ VEKHLSEE LLQVVW AMQEEFIA Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851 >AE014296-2904|AAF49347.2| 889|Drosophila melanogaster CG3885-PA protein. Length = 889 Score = 54.0 bits (124), Expect = 2e-07 Identities = 25/32 (78%), Positives = 26/32 (81%) Frame = +2 Query: 5 LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100 L LY+ VEKHLSEE LLQVVW AMQEEFIA Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851 >AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse transcriptase protein. Length = 1088 Score = 52.8 bits (121), Expect = 4e-07 Identities = 25/52 (48%), Positives = 32/52 (61%) Frame = -1 Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 +T+DL F+QI + DD PKTA T G +EF M GL+NA TFQ +D Sbjct: 294 STLDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMD 345 >AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. Length = 1003 Score = 51.6 bits (118), Expect = 1e-06 Identities = 24/51 (47%), Positives = 32/51 (62%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL F+QI + E DIPKTA +T G +EF + GL+NA FQ +D Sbjct: 216 TLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 266 >X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Drosophila melanogastertransposable element 297. ). Length = 1059 Score = 50.8 bits (116), Expect = 2e-06 Identities = 25/47 (53%), Positives = 31/47 (65%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363 TIDL K F+QI + E+ I KTA +T G +E+ M GLRNA TFQ Sbjct: 299 TIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQ 345 >AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed DNA polymerase protein. Length = 1065 Score = 50.8 bits (116), Expect = 2e-06 Identities = 25/47 (53%), Positives = 31/47 (65%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363 TIDL K F+QI + E+ I KTA +T G FE+ M GL+NA TFQ Sbjct: 288 TIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQ 334 >AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein protein. Length = 1150 Score = 50.4 bits (115), Expect = 2e-06 Identities = 24/47 (51%), Positives = 31/47 (65%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363 TIDL K F+QI + E+ I KTA +T G +E+ M GL+NA TFQ Sbjct: 373 TIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQ 419 >AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein protein. Length = 849 Score = 50.4 bits (115), Expect = 2e-06 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363 TIDL K F+QI + + I KTA +T +G +E+ M GL+NA TFQ Sbjct: 262 TIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQ 308 >AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse transcriptase protein. Length = 1217 Score = 49.6 bits (113), Expect = 4e-06 Identities = 24/52 (46%), Positives = 31/52 (59%) Frame = -1 Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 +T+DL F+QI + DI KTA T G +EF M GL+NA TFQ +D Sbjct: 408 STLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMD 459 >AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein protein. Length = 1037 Score = 49.6 bits (113), Expect = 4e-06 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = -1 Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 +T+DL K F QI + D+ KTA +T G +EF M GLRNA TFQ ++ Sbjct: 224 STLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMN 275 >X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Drosophila melanogastercopia-like element 17.6. ). Length = 1058 Score = 48.0 bits (109), Expect = 1e-05 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339 TIDL K F+QI + + + KTA +T G +E+ M GL+NA TFQ + D RP Sbjct: 300 TIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRP 355 >AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol protein protein. Length = 407 Score = 47.6 bits (108), Expect = 2e-05 Identities = 24/51 (47%), Positives = 29/51 (56%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 TIDL F+QI + D KTA T G +EF M GL+NA TFQ +D Sbjct: 277 TIDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMD 327 >U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transcriptase polyprotein protein. Length = 1041 Score = 43.6 bits (98), Expect = 3e-04 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL AF+QI + E D KTA + G +EF + GL+NA FQ +D Sbjct: 281 TLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAID 331 >AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA polymerase protein. Length = 1013 Score = 43.2 bits (97), Expect = 3e-04 Identities = 21/51 (41%), Positives = 29/51 (56%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KTA G +EF + GLRNA+ FQ +D Sbjct: 252 TLDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTID 302 >X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. Length = 1494 Score = 42.7 bits (96), Expect = 4e-04 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -1 Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVDK 348 +DL F + V ++ I T+ TP G +E+ M GL+NA FQ FV+K Sbjct: 805 LDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNK 855 >AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse transcriptase-like polymeraseprotein. Length = 1059 Score = 42.7 bits (96), Expect = 4e-04 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = -1 Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 + +DL F+QI + E DI KTA + G +EF + GL+NA FQ +D Sbjct: 287 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 338 >AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein protein. Length = 437 Score = 42.7 bits (96), Expect = 4e-04 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = -1 Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 + +DL F+QI + E DI KTA + G +EF + GL+NA FQ +D Sbjct: 130 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 181 >X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. melanogaster retrotransposongypsy gene fragment for reverse transcriptase-like enzyme.). Length = 930 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 255 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 305 >M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein protein. Length = 1010 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300 >EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein protein. Length = 1045 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335 >EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein protein. Length = 1045 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335 >DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein protein. Length = 1010 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300 >DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein protein. Length = 1010 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300 >AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol protein. Length = 1463 Score = 41.9 bits (94), Expect = 8e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351 T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D Sbjct: 703 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 753 >Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia polyprotein protein. Length = 1333 Score = 36.7 bits (81), Expect = 0.029 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354 T+DL F + V E P TA T GLFEF G +N+ F FV Sbjct: 576 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 625 >AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein. Length = 1026 Score = 36.7 bits (81), Expect = 0.029 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = -1 Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354 T+DL F + V E P TA T GLFEF G +N+ F FV Sbjct: 270 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 319 >M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein protein. Length = 2146 Score = 34.7 bits (76), Expect = 0.12 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13 + RL + C +N CM H TCSS P C T RYS Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296 >AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA, isoform A protein. Length = 2146 Score = 34.7 bits (76), Expect = 0.12 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13 + RL + C +N CM H TCSS P C T RYS Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296 >AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB, isoform B protein. Length = 2189 Score = 34.7 bits (76), Expect = 0.12 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13 + RL + C +N CM H TCSS P C T RYS Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296 >AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p protein. Length = 825 Score = 33.5 bits (73), Expect = 0.27 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354 +DL+ F+QI + ED T+ +T G + F + GL+ A +FQ + Sbjct: 303 LDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMM 351 >X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Drosophila retrotransposon412 genome. ). Length = 1237 Score = 31.1 bits (67), Expect = 1.4 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354 +DL+ F+QI + E T+ +T G + F + GL+ A +FQ + Sbjct: 409 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 457 >AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA polymerase protein. Length = 1000 Score = 31.1 bits (67), Expect = 1.4 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354 +DL+ F+QI + E T+ +T G + F + GL+ A +FQ + Sbjct: 172 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 220 >BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p protein. Length = 419 Score = 29.9 bits (64), Expect = 3.3 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -1 Query: 584 FVLSLAPSIRHNQDFAHSLPTWLSCIATIDLVKAFNQIPVFE 459 F++S A + HN+ A++LP+WLS I+ V+A QI FE Sbjct: 1 FIMSEATTNGHNEVPANNLPSWLSKISLEKAVQA--QIGDFE 40 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,274,196 Number of Sequences: 53049 Number of extensions: 443022 Number of successful extensions: 1483 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1462 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1483 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2951284050 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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