SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30596
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ...    55   8e-08
AY061578-1|AAL29126.1|  889|Drosophila melanogaster SD02883p pro...    54   2e-07
AE014296-2904|AAF49347.2|  889|Drosophila melanogaster CG3885-PA...    54   2e-07
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran...    53   4e-07
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.      52   1e-06
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    51   2e-06
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed...    51   2e-06
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ...    50   2e-06
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    50   2e-06
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran...    50   4e-06
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ...    50   4e-06
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    48   1e-05
AF541947-2|AAN34648.1|  407|Drosophila melanogaster truncated po...    48   2e-05
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc...    44   3e-04
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed...    43   3e-04
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         43   4e-04
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran...    43   4e-04
AF315785-1|AAK01366.1|  437|Drosophila melanogaster pol polyprot...    43   4e-04
X03734-1|CAA27371.1|  930|Drosophila melanogaster protein ( D. m...    42   8e-04
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei...    42   8e-04
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ...    42   8e-04
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ...    42   8e-04
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ...    42   8e-04
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ...    42   8e-04
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr...    42   8e-04
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly...    37   0.029
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro...    37   0.029
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    35   0.12 
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    35   0.12 
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    35   0.12 
AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p pro...    33   0.27 
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros...    31   1.4  
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen...    31   1.4  
BT024302-1|ABC86364.1|  419|Drosophila melanogaster IP12379p pro...    30   3.3  

>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
           protein.
          Length = 1006

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339
           TIDL+K F+QI +  + IPKTA TT  G +E+  M  GL+NA  TFQ  + D  RP
Sbjct: 247 TIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLRP 302


>AY061578-1|AAL29126.1|  889|Drosophila melanogaster SD02883p
           protein.
          Length = 889

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 26/32 (81%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100
           L  LY+ VEKHLSEE  LLQVVW AMQEEFIA
Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851


>AE014296-2904|AAF49347.2|  889|Drosophila melanogaster CG3885-PA
           protein.
          Length = 889

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 26/32 (81%)
 Frame = +2

Query: 5   LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100
           L  LY+ VEKHLSEE  LLQVVW AMQEEFIA
Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851


>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1088

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 25/52 (48%), Positives = 32/52 (61%)
 Frame = -1

Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           +T+DL   F+QI +  DD PKTA T   G +EF  M  GL+NA  TFQ  +D
Sbjct: 294 STLDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMD 345


>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
          Length = 1003

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 24/51 (47%), Positives = 32/51 (62%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   F+QI + E DIPKTA +T  G +EF  +  GL+NA   FQ  +D
Sbjct: 216 TLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 266


>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
           TIDL K F+QI + E+ I KTA +T  G +E+  M  GLRNA  TFQ
Sbjct: 299 TIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQ 345


>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
           DNA polymerase protein.
          Length = 1065

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
           TIDL K F+QI + E+ I KTA +T  G FE+  M  GL+NA  TFQ
Sbjct: 288 TIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQ 334


>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
           protein.
          Length = 1150

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
           TIDL K F+QI + E+ I KTA +T  G +E+  M  GL+NA  TFQ
Sbjct: 373 TIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQ 419


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
           TIDL K F+QI +  + I KTA +T +G +E+  M  GL+NA  TFQ
Sbjct: 262 TIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQ 308


>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1217

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 31/52 (59%)
 Frame = -1

Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           +T+DL   F+QI +   DI KTA T   G +EF  M  GL+NA  TFQ  +D
Sbjct: 408 STLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMD 459


>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
           protein.
          Length = 1037

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = -1

Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           +T+DL K F QI +   D+ KTA +T  G +EF  M  GLRNA  TFQ  ++
Sbjct: 224 STLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMN 275


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339
           TIDL K F+QI +  + + KTA +T  G +E+  M  GL+NA  TFQ  + D  RP
Sbjct: 300 TIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRP 355


>AF541947-2|AAN34648.1|  407|Drosophila melanogaster truncated pol
           protein protein.
          Length = 407

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 24/51 (47%), Positives = 29/51 (56%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           TIDL   F+QI +   D  KTA T   G +EF  M  GL+NA  TFQ  +D
Sbjct: 277 TIDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMD 327


>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
           transcriptase polyprotein protein.
          Length = 1041

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL  AF+QI + E D  KTA +   G +EF  +  GL+NA   FQ  +D
Sbjct: 281 TLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAID 331


>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
           DNA polymerase protein.
          Length = 1013

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KTA     G +EF  +  GLRNA+  FQ  +D
Sbjct: 252 TLDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTID 302


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -1

Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVDK 348
           +DL   F  + V ++ I  T+  TP G +E+  M  GL+NA   FQ FV+K
Sbjct: 805 LDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNK 855


>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
           transcriptase-like polymeraseprotein.
          Length = 1059

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = -1

Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           + +DL   F+QI + E DI KTA +   G +EF  +  GL+NA   FQ  +D
Sbjct: 287 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 338


>AF315785-1|AAK01366.1|  437|Drosophila melanogaster pol polyprotein
           protein.
          Length = 437

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = -1

Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           + +DL   F+QI + E DI KTA +   G +EF  +  GL+NA   FQ  +D
Sbjct: 130 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 181


>X03734-1|CAA27371.1|  930|Drosophila melanogaster protein ( D.
           melanogaster retrotransposongypsy gene fragment for
           reverse transcriptase-like enzyme.).
          Length = 930

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 255 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 305


>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
           protein.
          Length = 1010

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300


>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
           protein.
          Length = 1045

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335


>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
           protein.
          Length = 1045

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335


>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
           protein.
          Length = 1010

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300


>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
           protein.
          Length = 1010

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300


>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
           protein.
          Length = 1463

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
           T+DL   ++QI + E D  KT+ +   G +EF  +  GLRNAS  FQ  +D
Sbjct: 703 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 753


>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
           polyprotein protein.
          Length = 1333

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
           T+DL   F  + V E   P TA  T  GLFEF     G +N+   F  FV
Sbjct: 576 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 625


>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
           protein.
          Length = 1026

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
           T+DL   F  + V E   P TA  T  GLFEF     G +N+   F  FV
Sbjct: 270 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 319


>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
           protein.
          Length = 2146

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
           +  RL  + C +N  CM  H TCSS P    C  T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
           isoform A protein.
          Length = 2146

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
           +  RL  + C +N  CM  H TCSS P    C  T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
           isoform B protein.
          Length = 2189

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
           +  RL  + C +N  CM  H TCSS P    C  T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296


>AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p
           protein.
          Length = 825

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -1

Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
           +DL+  F+QI + ED    T+ +T  G + F  +  GL+ A  +FQ  +
Sbjct: 303 LDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMM 351


>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
           Drosophila retrotransposon412 genome. ).
          Length = 1237

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
           +DL+  F+QI + E     T+ +T  G + F  +  GL+ A  +FQ  +
Sbjct: 409 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 457


>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
           DNA polymerase protein.
          Length = 1000

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
           +DL+  F+QI + E     T+ +T  G + F  +  GL+ A  +FQ  +
Sbjct: 172 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 220


>BT024302-1|ABC86364.1|  419|Drosophila melanogaster IP12379p
           protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = -1

Query: 584 FVLSLAPSIRHNQDFAHSLPTWLSCIATIDLVKAFNQIPVFE 459
           F++S A +  HN+  A++LP+WLS I+    V+A  QI  FE
Sbjct: 1   FIMSEATTNGHNEVPANNLPSWLSKISLEKAVQA--QIGDFE 40


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,274,196
Number of Sequences: 53049
Number of extensions: 443022
Number of successful extensions: 1483
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -