Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30596
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 55 8e-08
AY061578-1|AAL29126.1| 889|Drosophila melanogaster SD02883p pro... 54 2e-07
AE014296-2904|AAF49347.2| 889|Drosophila melanogaster CG3885-PA... 54 2e-07
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 53 4e-07
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 52 1e-06
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 51 2e-06
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 51 2e-06
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 50 2e-06
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 50 2e-06
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 50 4e-06
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 50 4e-06
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 48 1e-05
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 48 2e-05
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 44 3e-04
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 43 3e-04
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 43 4e-04
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 43 4e-04
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 43 4e-04
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 42 8e-04
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 42 8e-04
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 42 8e-04
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 42 8e-04
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 42 8e-04
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 42 8e-04
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 42 8e-04
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 37 0.029
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 37 0.029
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 35 0.12
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 35 0.12
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 35 0.12
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 33 0.27
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 31 1.4
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 31 1.4
BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p pro... 30 3.3
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339
TIDL+K F+QI + + IPKTA TT G +E+ M GL+NA TFQ + D RP
Sbjct: 247 TIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLRP 302
>AY061578-1|AAL29126.1| 889|Drosophila melanogaster SD02883p
protein.
Length = 889
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +2
Query: 5 LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100
L LY+ VEKHLSEE LLQVVW AMQEEFIA
Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851
>AE014296-2904|AAF49347.2| 889|Drosophila melanogaster CG3885-PA
protein.
Length = 889
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +2
Query: 5 LHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIA 100
L LY+ VEKHLSEE LLQVVW AMQEEFIA
Sbjct: 820 LENLYKKVEKHLSEEENLLQVVWHAMQEEFIA 851
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 52.8 bits (121), Expect = 4e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1
Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
+T+DL F+QI + DD PKTA T G +EF M GL+NA TFQ +D
Sbjct: 294 STLDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMD 345
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL F+QI + E DIPKTA +T G +EF + GL+NA FQ +D
Sbjct: 216 TLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 266
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
TIDL K F+QI + E+ I KTA +T G +E+ M GLRNA TFQ
Sbjct: 299 TIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQ 345
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
TIDL K F+QI + E+ I KTA +T G FE+ M GL+NA TFQ
Sbjct: 288 TIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQ 334
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
TIDL K F+QI + E+ I KTA +T G +E+ M GL+NA TFQ
Sbjct: 373 TIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQ 419
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQ 363
TIDL K F+QI + + I KTA +T +G +E+ M GL+NA TFQ
Sbjct: 262 TIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQ 308
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -1
Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
+T+DL F+QI + DI KTA T G +EF M GL+NA TFQ +D
Sbjct: 408 STLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMD 459
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = -1
Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
+T+DL K F QI + D+ KTA +T G +EF M GLRNA TFQ ++
Sbjct: 224 STLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMN 275
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV-DKTRP 339
TIDL K F+QI + + + KTA +T G +E+ M GL+NA TFQ + D RP
Sbjct: 300 TIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRP 355
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
TIDL F+QI + D KTA T G +EF M GL+NA TFQ +D
Sbjct: 277 TIDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMD 327
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL AF+QI + E D KTA + G +EF + GL+NA FQ +D
Sbjct: 281 TLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAID 331
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KTA G +EF + GLRNA+ FQ +D
Sbjct: 252 TLDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTID 302
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = -1
Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVDK 348
+DL F + V ++ I T+ TP G +E+ M GL+NA FQ FV+K
Sbjct: 805 LDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNK 855
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -1
Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
+ +DL F+QI + E DI KTA + G +EF + GL+NA FQ +D
Sbjct: 287 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 338
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -1
Query: 506 ATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
+ +DL F+QI + E DI KTA + G +EF + GL+NA FQ +D
Sbjct: 130 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALD 181
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 255 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 305
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 285 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 335
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 250 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 300
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFVD 351
T+DL ++QI + E D KT+ + G +EF + GLRNAS FQ +D
Sbjct: 703 TLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALD 753
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 36.7 bits (81), Expect = 0.029
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
T+DL F + V E P TA T GLFEF G +N+ F FV
Sbjct: 576 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 625
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 36.7 bits (81), Expect = 0.029
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 503 TIDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
T+DL F + V E P TA T GLFEF G +N+ F FV
Sbjct: 270 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFV 319
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
+ RL + C +N CM H TCSS P C T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
+ RL + C +N CM H TCSS P C T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 129 IHARLQSDVCAMNSSCMARHTTCSSPPSSLRCFSTVRYS 13
+ RL + C +N CM H TCSS P C T RYS
Sbjct: 260 LFTRLPDNFC-LNDPCMG-HGTCSSSPEGYECRCTARYS 296
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.27
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
+DL+ F+QI + ED T+ +T G + F + GL+ A +FQ +
Sbjct: 303 LDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMM 351
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
+DL+ F+QI + E T+ +T G + F + GL+ A +FQ +
Sbjct: 409 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 457
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 500 IDLVKAFNQIPVFEDDIPKTAITTPFGLFEFPYMTIGLRNASRTFQNFV 354
+DL+ F+QI + E T+ +T G + F + GL+ A +FQ +
Sbjct: 172 LDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 220
>BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p
protein.
Length = 419
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 584 FVLSLAPSIRHNQDFAHSLPTWLSCIATIDLVKAFNQIPVFE 459
F++S A + HN+ A++LP+WLS I+ V+A QI FE
Sbjct: 1 FIMSEATTNGHNEVPANNLPSWLSKISLEKAVQA--QIGDFE 40
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,274,196
Number of Sequences: 53049
Number of extensions: 443022
Number of successful extensions: 1483
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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