Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30595
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.4  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   6.0  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   7.9  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 407 VIEEPPLEENLNRIQ-LDGELAQTVDEALAILSDKRK*IDILKNDLK 544
           VI E  L+E   +++ LDG+   + D+ L +  + +K  D LKN  K
Sbjct: 226 VIYETELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQK 272


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 447  ILFRFSSKGGSSMTTFEGTGLAVSG 373
            ++ R   + GS++  F GTG  VSG
Sbjct: 1028 LVVRIDERHGSAVCDFTGTGPEVSG 1052


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 704 NSFH*DVSNKKCMTVHRTSYS 766
           N+FH   SN+ C T  R ++S
Sbjct: 141 NNFHLPKSNRNCRTAARRNHS 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,312
Number of Sequences: 2352
Number of extensions: 10353
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)