Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30595
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical ... 86 3e-17
AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical ... 86 3e-17
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 36 0.042
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 36 0.042
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 36 0.042
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 36 0.042
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 29 2.8
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 29 4.9
Z70266-3|CAA94207.1| 71|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 6.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 6.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.4
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 28 6.4
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 8.5
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical
protein Y73E7A.1b protein.
Length = 146
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/55 (63%), Positives = 46/55 (83%)
Frame = +1
Query: 517 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQRV 681
D+HPEKR++AA+ AFE+ LP LK +P+ RLSQLK++LKKEW KSP+NPLN R+
Sbjct: 87 DKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARL 141
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 377 ETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKR 511
E K K+ + L ENLN+++++ A+ VD+AL +L +++
Sbjct: 38 EKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEK 82
>AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical
protein Y73E7A.1a protein.
Length = 223
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/55 (63%), Positives = 46/55 (83%)
Frame = +1
Query: 517 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQRV 681
D+HPEKR++AA+ AFE+ LP LK +P+ RLSQLK++LKKEW KSP+NPLN R+
Sbjct: 164 DKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARL 218
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = +3
Query: 51 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 176
MPKKF EN K AAR RK AK ++ K KA EDA+W DN
Sbjct: 1 MPKKFASENPKVTAARDRKATAKKDEADKKAKATEDAKWVDN 42
Score = 31.9 bits (69), Expect = 0.52
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 221 KKTFRSITKES*AKALLEKELEXXXXXXXXXXXXXXXXRAQISQAKEKMAK-----PETA 385
KK ++ ++ + L E+E+ RA I KE + E
Sbjct: 58 KKREEALRRKEENRKLAEEEMSSLGNKKPAGAATQKVTRAHIHIRKEDEERINRELEEKR 117
Query: 386 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKR 511
K K+ + L ENLN+++++ A+ VD+AL +L +++
Sbjct: 118 KQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEK 159
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
A+ D H KR +AF + Q P ++A +P ++ Q+ + L K W PQ
Sbjct: 127 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 177
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
A+ D H KR +AF + Q P ++A +P ++ Q+ + L K W PQ
Sbjct: 126 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 176
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
A+ D H KR +AF + Q P ++A +P ++ Q+ + L K W PQ
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 178
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
A+ D H KR +AF + Q P ++A +P ++ Q+ + L K W PQ
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 178
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*I 520
+ +A+EK+ K P++ + P+K ++PPL++ ++ E +++ + ++ +K+
Sbjct: 455 VEKAEEKVEKKPKSPQKPPAKPTAQKPPLKKTEEVDGIEREASESSSKKSSVAPEKKNPK 514
Query: 521 DILKNDLKQPSQPLNKSICHVLKPRTLRSGFLSS 622
I + S K+ P R GF+ S
Sbjct: 515 KIAFVEYNSRSSRKRKAGECSTPPAVTRRGFIPS 548
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 513 FRLSLSIARASSTVCANSPSNCILFRFSSKGGSSMTTFEGTGLAV 379
F + L I+ A++ +CA +P+ I F G + T+F TG +
Sbjct: 170 FLIPLYISVAANLICAAAPNYLIFLLFRFISGVATTSFSMTGFVL 214
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQ 556
EE +++ L IQL E Q+ + S K K I+ILK D+K+ +
Sbjct: 181 EELSIDQKLKNIQLTCEGLQSAVGNFEMNSKKAKEIEILKMDIKKTQE 228
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 513 FRLSLSIARASSTVCANSPSNCILFRFSSKGGSSMTTFEGTGLAV 379
F + L I+ A++ +CA +P+ I F G + T+F TG +
Sbjct: 170 FLIPLYISVAANLICAAAPNYLIFLLFRFISGVATTSFSMTGFVL 214
>Z70266-3|CAA94207.1| 71|Caenorhabditis elegans Hypothetical
protein C40C9.4 protein.
Length = 71
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWED 173
MP FT + +V Q +EN +L +QK K V+ +ED
Sbjct: 1 MPPFFTEKLQGSVEELQNQENEELTIEQKKKAGVDQNYFED 41
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 344 ISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQT 475
++Q + + + E AKP + +EPP E +I L G+L ++
Sbjct: 584 VTQPEMEPSSSEPAKPAKPSITKKEPPSETMSAKISLIGDLQKS 627
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 78 SKAVAARQRKENAKLEKDQKTKKAVED 158
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10044 SEIAAKKSAEQKSKLETEAKTKKVIED 10070
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 78 SKAVAARQRKENAKLEKDQKTKKAVED 158
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 78 SKAVAARQRKENAKLEKDQKTKKAVED 158
S+ A + ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
+E +EENL QL+ +DE +A S+ K LK+ + + K+ VLK
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389
Query: 593 RTLR 604
R L+
Sbjct: 390 RELK 393
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
+E +EENL QL+ +DE +A S+ K LK+ + + K+ VLK
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389
Query: 593 RTLR 604
R L+
Sbjct: 390 RELK 393
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
+E +EENL QL+ +DE +A S+ K LK+ + + K+ VLK
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389
Query: 593 RTLR 604
R L+
Sbjct: 390 RELK 393
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 397 DESTAVTSENRKKNKKDKKKSESEKAVEE 425
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 72 ENSKAVAARQRKENAKLEKDQKTKKAVED 158
+ S AV + RK+N K +K +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,144
Number of Sequences: 27780
Number of extensions: 239775
Number of successful extensions: 958
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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