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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30595
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025727-9|ABD63208.1|  146|Caenorhabditis elegans Hypothetical ...    86   3e-17
AC025727-8|AAG23390.2|  223|Caenorhabditis elegans Hypothetical ...    86   3e-17
U22831-3|AAK67237.1|  234|Caenorhabditis elegans Hmg protein 1.2...    36   0.042
U22831-2|AAK67238.1|  233|Caenorhabditis elegans Hmg protein 1.2...    36   0.042
U22831-1|AAK20071.1|  235|Caenorhabditis elegans Hmg protein 1.2...    36   0.042
AF056577-1|AAC78599.1|  235|Caenorhabditis elegans high mobility...    36   0.042
AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z92775-4|CAB07163.4|  501|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AL132895-5|CAC35863.3|  501|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z70266-3|CAA94207.1|   71|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    28   6.4  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   6.4  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   6.4  
AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z46267-10|CAA86425.1|  581|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AC025727-9|ABD63208.1|  146|Caenorhabditis elegans Hypothetical
           protein Y73E7A.1b protein.
          Length = 146

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +1

Query: 517 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQRV 681
           D+HPEKR++AA+ AFE+  LP LK  +P+ RLSQLK++LKKEW KSP+NPLN R+
Sbjct: 87  DKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARL 141



 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 ETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKR 511
           E  K    K+ +    L ENLN+++++   A+ VD+AL +L +++
Sbjct: 38  EKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEK 82


>AC025727-8|AAG23390.2|  223|Caenorhabditis elegans Hypothetical
           protein Y73E7A.1a protein.
          Length = 223

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +1

Query: 517 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQNPLNQRV 681
           D+HPEKR++AA+ AFE+  LP LK  +P+ RLSQLK++LKKEW KSP+NPLN R+
Sbjct: 164 DKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARL 218



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 27/42 (64%)
 Frame = +3

Query: 51  MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 176
           MPKKF  EN K  AAR RK  AK ++  K  KA EDA+W DN
Sbjct: 1   MPKKFASENPKVTAARDRKATAKKDEADKKAKATEDAKWVDN 42



 Score = 31.9 bits (69), Expect = 0.52
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
 Frame = +2

Query: 221 KKTFRSITKES*AKALLEKELEXXXXXXXXXXXXXXXXRAQISQAKEKMAK-----PETA 385
           KK   ++ ++   + L E+E+                 RA I   KE   +      E  
Sbjct: 58  KKREEALRRKEENRKLAEEEMSSLGNKKPAGAATQKVTRAHIHIRKEDEERINRELEEKR 117

Query: 386 KPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKR 511
           K    K+ +    L ENLN+++++   A+ VD+AL +L +++
Sbjct: 118 KQEAQKIEVAGDLLVENLNKLEVEEGEARNVDDALKVLGEEK 159


>U22831-3|AAK67237.1|  234|Caenorhabditis elegans Hmg protein 1.2,
           isoform b protein.
          Length = 234

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
           A+ D H  KR  +AF  + Q   P ++A +P  ++ Q+ + L K W   PQ
Sbjct: 127 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 177


>U22831-2|AAK67238.1|  233|Caenorhabditis elegans Hmg protein 1.2,
           isoform c protein.
          Length = 233

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
           A+ D H  KR  +AF  + Q   P ++A +P  ++ Q+ + L K W   PQ
Sbjct: 126 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 176


>U22831-1|AAK20071.1|  235|Caenorhabditis elegans Hmg protein 1.2,
           isoform a protein.
          Length = 235

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
           A+ D H  KR  +AF  + Q   P ++A +P  ++ Q+ + L K W   PQ
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 178


>AF056577-1|AAC78599.1|  235|Caenorhabditis elegans high mobility
           group protein 1.2 protein.
          Length = 235

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 508 AEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKSPQ 660
           A+ D H  KR  +AF  + Q   P ++A +P  ++ Q+ + L K W   PQ
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQ 178


>AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical
           protein Y73B3A.1 protein.
          Length = 659

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = +2

Query: 344 ISQAKEKMAK-PETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*I 520
           + +A+EK+ K P++ +  P+K   ++PPL++      ++ E +++  +  ++  +K+   
Sbjct: 455 VEKAEEKVEKKPKSPQKPPAKPTAQKPPLKKTEEVDGIEREASESSSKKSSVAPEKKNPK 514

Query: 521 DILKNDLKQPSQPLNKSICHVLKPRTLRSGFLSS 622
            I   +    S    K+      P   R GF+ S
Sbjct: 515 KIAFVEYNSRSSRKRKAGECSTPPAVTRRGFIPS 548


>Z92775-4|CAB07163.4|  501|Caenorhabditis elegans Hypothetical
           protein C06H5.6 protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 513 FRLSLSIARASSTVCANSPSNCILFRFSSKGGSSMTTFEGTGLAV 379
           F + L I+ A++ +CA +P+  I   F    G + T+F  TG  +
Sbjct: 170 FLIPLYISVAANLICAAAPNYLIFLLFRFISGVATTSFSMTGFVL 214


>Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical
           protein T11B7.1 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQ 556
           EE  +++ L  IQL  E  Q+      + S K K I+ILK D+K+  +
Sbjct: 181 EELSIDQKLKNIQLTCEGLQSAVGNFEMNSKKAKEIEILKMDIKKTQE 228


>AL132895-5|CAC35863.3|  501|Caenorhabditis elegans Hypothetical
           protein C06H5.6 protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 513 FRLSLSIARASSTVCANSPSNCILFRFSSKGGSSMTTFEGTGLAV 379
           F + L I+ A++ +CA +P+  I   F    G + T+F  TG  +
Sbjct: 170 FLIPLYISVAANLICAAAPNYLIFLLFRFISGVATTSFSMTGFVL 214


>Z70266-3|CAA94207.1|   71|Caenorhabditis elegans Hypothetical
           protein C40C9.4 protein.
          Length = 71

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 51  MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWED 173
           MP  FT +   +V   Q +EN +L  +QK K  V+   +ED
Sbjct: 1   MPPFFTEKLQGSVEELQNQENEELTIEQKKKAGVDQNYFED 41


>Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical
           protein C05G5.2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 344 ISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQT 475
           ++Q + + +  E AKP    +  +EPP E    +I L G+L ++
Sbjct: 584 VTQPEMEPSSSEPAKPAKPSITKKEPPSETMSAKISLIGDLQKS 627


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
             protein.
          Length = 10578

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 78    SKAVAARQRKENAKLEKDQKTKKAVED 158
             S+  A +  ++ +KLE + KTKK +ED
Sbjct: 10044 SEIAAKKSAEQKSKLETEAKTKKVIED 10070


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 78    SKAVAARQRKENAKLEKDQKTKKAVED 158
             S+  A +  ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 78    SKAVAARQRKENAKLEKDQKTKKAVED 158
             S+  A +  ++ +KLE + KTKK +ED
Sbjct: 10064 SEIAAKKSAEQKSKLETEAKTKKVIED 10090


>AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical
           protein H06I04.3b protein.
          Length = 716

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
           +E  +EENL   QL+      +DE +A  S+        K  LK+  + + K+   VLK 
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389

Query: 593 RTLR 604
           R L+
Sbjct: 390 RELK 393


>AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical
           protein H06I04.3c protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
           +E  +EENL   QL+      +DE +A  S+        K  LK+  + + K+   VLK 
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389

Query: 593 RTLR 604
           R L+
Sbjct: 390 RELK 393


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 413 EEPPLEENLNRIQLDGELAQTVDEALAILSDKRK*IDILKNDLKQPSQPLNKSICHVLKP 592
           +E  +EENL   QL+      +DE +A  S+        K  LK+  + + K+   VLK 
Sbjct: 336 KEVEIEENLTEEQLEDRAMAEIDELIAKASEDE------KAALKKKKKKMLKAKARVLKR 389

Query: 593 RTLR 604
           R L+
Sbjct: 390 RELK 393


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
           protein F49E2.5j protein.
          Length = 1100

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508


>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5i protein.
          Length = 1030

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508


>Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical
           protein F49E2.5g protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 397 DESTAVTSENRKKNKKDKKKSESEKAVEE 425


>Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical
           protein F49E2.5f protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508


>Z46267-10|CAA86425.1|  581|Caenorhabditis elegans Hypothetical
           protein F49E2.5e protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508


>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
           protein F49E2.5a protein.
          Length = 1215

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 72  ENSKAVAARQRKENAKLEKDQKTKKAVED 158
           + S AV +  RK+N K +K  +++KAVE+
Sbjct: 480 DESTAVTSENRKKNKKDKKKSESEKAVEE 508


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,144
Number of Sequences: 27780
Number of extensions: 239775
Number of successful extensions: 958
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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