BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30594 (762 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 165 1e-39 UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 111 2e-23 UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 110 4e-23 UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 109 1e-22 UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 99 1e-19 UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 96 1e-18 UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 3e-18 UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 94 3e-18 UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 91 3e-17 UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 79 1e-13 UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 77 5e-13 UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 73 6e-12 UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 1e-10 UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10 UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 9e-10 UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 66 1e-09 UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 65 2e-09 UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 2e-09 UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 64 4e-09 UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 62 1e-08 UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 62 1e-08 UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 62 2e-08 UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 59 1e-07 UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 58 2e-07 UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 57 4e-07 UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 57 5e-07 UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 54 3e-06 UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 54 5e-06 UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06 UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 51 3e-05 UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 50 8e-05 UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 48 2e-04 UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 47 4e-04 UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 45 0.002 UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 44 0.003 UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 44 0.004 UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 42 0.022 UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 42 0.022 UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 40 0.051 UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 38 0.36 UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 1.4 UniRef50_Q6ZS94 Cluster: CDNA FLJ45717 fis, clone FELNG2001613; ... 36 1.4 UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 36 1.4 UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 3.3 UniRef50_UPI00005A065A Cluster: PREDICTED: similar to interferon... 34 4.4 UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 34 4.4 UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 34 4.4 UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 33 7.7 UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 33 7.7 UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 7.7 >UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens (Human) Length = 243 Score = 165 bits (401), Expect = 1e-39 Identities = 79/85 (92%), Positives = 82/85 (96%) Frame = +2 Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433 +VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508 RGQRAKSMKFVDGLMIHSGDP N Y Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167 Score = 142 bits (345), Expect = 6e-33 Identities = 71/82 (86%), Positives = 76/82 (92%) Frame = +3 Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185 MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59 Query: 186 GEKGRRIRELTSVVQKRFNIPE 251 GEKGRRIRELT+VVQKRF PE Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81 Score = 96.3 bits (229), Expect = 7e-19 Identities = 43/63 (68%), Positives = 49/63 (77%) Frame = +1 Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672 P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222 Query: 673 TSE 681 SE Sbjct: 223 ISE 225 >UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 617 Score = 111 bits (266), Expect = 2e-23 Identities = 56/80 (70%), Positives = 65/80 (81%) Frame = +3 Query: 12 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191 V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61 Query: 192 KGRRIRELTSVVQKRFNIPE 251 KG++I+ELTSVVQKRF E Sbjct: 62 KGKKIKELTSVVQKRFEFLE 81 Score = 56.8 bits (131), Expect = 5e-07 Identities = 42/88 (47%), Positives = 46/88 (52%) Frame = +2 Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433 +VEL AE V RG AIAQAESLRYKL+GGLA+ L Sbjct: 83 SVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM--------------------------L 116 Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDYSTL 517 QRAKSMKF DG +I SG P DY L Sbjct: 117 CAQRAKSMKFKDGYLISSGQPVKDYIDL 144 Score = 54.0 bits (124), Expect = 4e-06 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = +1 Query: 490 RPLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEP 645 +P++ ++ A RHVL RQGVLGIKVKIM WD +GK P PD + + P Sbjct: 136 QPVKDYIDLAVRHVL-RQGVLGIKVKIMFNWDPKGKQSLTTPLPDLVTIQTP 186 >UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal protein S3 - Candida albicans (Yeast) Length = 251 Score = 110 bits (264), Expect = 4e-23 Identities = 51/84 (60%), Positives = 62/84 (73%) Frame = +2 Query: 257 VELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLR 436 + +YAE V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR Sbjct: 85 IAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLR 144 Query: 437 GQRAKSMKFVDGLMIHSGDPCNDY 508 RAKS K+ DG MIHSG P D+ Sbjct: 145 AARAKSQKYADGFMIHSGQPTRDF 168 Score = 108 bits (259), Expect = 2e-22 Identities = 52/78 (66%), Positives = 63/78 (80%), Gaps = 1/78 (1%) Frame = +3 Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200 +SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65 Query: 201 RIRELTSVVQKRFNI-PE 251 RI ELTS++ KRF + PE Sbjct: 66 RIHELTSLIVKRFKLSPE 83 Score = 47.6 bits (108), Expect = 3e-04 Identities = 29/67 (43%), Positives = 40/67 (59%) Frame = +1 Query: 490 RPLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLE 669 +P + ++ A RHVL+RQGVLGIKVKIM + GP + PD + + E KDE + Sbjct: 163 QPTRDFIDIAIRHVLMRQGVLGIKVKIMKD-PAANRFGP-RALPDAVKIAEAKDEDEVI- 219 Query: 670 PTSEVRS 690 P V+S Sbjct: 220 PAPTVKS 226 >UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4; Trypanosoma|Rep: 40S ribosomal protein S3, putative - Trypanosoma brucei Length = 266 Score = 109 bits (261), Expect = 1e-22 Identities = 49/87 (56%), Positives = 65/87 (74%) Frame = +2 Query: 230 EAIQHSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 409 + + ++L+AE V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GC Sbjct: 126 QRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGC 185 Query: 410 EVVVSGKLRGQRAKSMKFVDGLMIHSG 490 EV + GK++GQRAKSM F DG MI SG Sbjct: 186 EVTIGGKIKGQRAKSMTFRDGYMIKSG 212 Score = 108 bits (259), Expect = 2e-22 Identities = 52/77 (67%), Positives = 64/77 (83%) Frame = +3 Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200 +SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115 Query: 201 RIRELTSVVQKRFNIPE 251 RIRELT+ +Q+RFN E Sbjct: 116 RIRELTACLQQRFNYKE 132 Score = 38.3 bits (85), Expect = 0.21 Identities = 22/47 (46%), Positives = 27/47 (57%) Frame = +1 Query: 508 LNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 648 ++TATRH LR G +G+ VKIM P Q + PD I V EPK Sbjct: 219 VDTATRHCHLRAGTIGVNVKIMRP---QSMIEEDEVLPDVITVIEPK 262 >UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Trichomonas vaginalis G3|Rep: Ribosomal protein S3, putative - Trichomonas vaginalis G3 Length = 216 Score = 98.7 bits (235), Expect = 1e-19 Identities = 42/87 (48%), Positives = 62/87 (71%) Frame = +2 Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433 ++E++ + + +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKL Sbjct: 84 SLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKL 143 Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDYST 514 RG RA + K+ +G M+ SGD + T Sbjct: 144 RGARASTSKYKEGYMVKSGDVTKQFVT 170 Score = 82.6 bits (195), Expect = 1e-14 Identities = 38/82 (46%), Positives = 54/82 (65%) Frame = +3 Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185 M +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ + Sbjct: 1 MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFV 60 Query: 186 GEKGRRIRELTSVVQKRFNIPE 251 GRR++E+ ++QKR+ + E Sbjct: 61 DNHGRRLQEVRMMIQKRWRLKE 82 Score = 46.8 bits (106), Expect = 6e-04 Identities = 22/45 (48%), Positives = 29/45 (64%) Frame = +1 Query: 517 ATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 651 A H+ ++Q +GI+V IML D G +GPK+ QPD I V E KD Sbjct: 172 AVGHIPMKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216 >UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 - Encephalitozoon cuniculi Length = 228 Score = 95.9 bits (228), Expect = 1e-18 Identities = 43/85 (50%), Positives = 61/85 (71%) Frame = +2 Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433 +VE+ E V +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGKL Sbjct: 94 SVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKL 153 Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508 +GQRAKS+KF DG++IHSGD DY Sbjct: 154 KGQRAKSVKFQDGVLIHSGDAVKDY 178 Score = 53.2 bits (122), Expect = 7e-06 Identities = 23/48 (47%), Positives = 32/48 (66%) Frame = +1 Query: 508 LNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 651 +NT V +QGV+GI+V+IMLP+D +G GP P PD I + EP + Sbjct: 179 INTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226 Score = 51.6 bits (118), Expect = 2e-05 Identities = 21/73 (28%), Positives = 42/73 (57%) Frame = +3 Query: 36 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 215 +F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+ Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80 Query: 216 TSVVQKRFNIPEQ 254 + +R +P++ Sbjct: 81 QHLAAQRLEVPDE 93 >UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to 40S ribosomal protein S3 - Canis familiaris Length = 161 Score = 94.3 bits (224), Expect = 3e-18 Identities = 45/57 (78%), Positives = 51/57 (89%) Frame = +3 Query: 24 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 194 SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62 Score = 63.7 bits (148), Expect = 5e-09 Identities = 36/77 (46%), Positives = 43/77 (55%) Frame = +2 Query: 383 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPDMCFSDKEY*ESR 562 + ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N Y + S+ Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139 Query: 563 SKSCCRGTSKARTARRS 613 +SC GT A RS Sbjct: 140 CRSCFPGTQAVTLALRS 156 >UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Oligohymenophorea|Rep: KH domain containing protein - Tetrahymena thermophila SB210 Length = 253 Score = 94.3 bits (224), Expect = 3e-18 Identities = 40/89 (44%), Positives = 64/89 (71%) Frame = +2 Query: 242 HSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 421 +S ++++AE + +GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++ Sbjct: 92 YSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIII 151 Query: 422 SGKLRGQRAKSMKFVDGLMIHSGDPCNDY 508 SGKL+ QRAK+MKF G MI +G P NDY Sbjct: 152 SGKLKQQRAKTMKFKQGYMICTGQPKNDY 180 Score = 87.4 bits (207), Expect = 3e-16 Identities = 39/73 (53%), Positives = 56/73 (76%) Frame = +3 Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200 I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+ Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77 Query: 201 RIRELTSVVQKRF 239 + +ELT +QKRF Sbjct: 78 KHKELTQFLQKRF 90 Score = 52.0 bits (119), Expect = 2e-05 Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 2/55 (3%) Frame = +1 Query: 490 RPLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQ--GKNGPKKPQPDHILVTEPK 648 +P ++ A RHV +QG++G+KVKIMLP++ K G K P PD++++ PK Sbjct: 175 QPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPK 229 >UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreococcus tauri|Rep: Putative ribosomal protein - Ostreococcus tauri Length = 145 Score = 91.1 bits (216), Expect = 3e-17 Identities = 42/53 (79%), Positives = 46/53 (86%) Frame = +2 Query: 350 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 508 VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDY 82 Score = 60.1 bits (139), Expect = 6e-08 Identities = 25/60 (41%), Positives = 41/60 (68%) Frame = +1 Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672 P++ + + TRH LLRQG +G++VKIML D +G++GP P PD +++ PK++ +P Sbjct: 78 PVRDYIVSCTRHALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137 >UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 243 Score = 79.0 bits (186), Expect = 1e-13 Identities = 38/54 (70%), Positives = 43/54 (79%) Frame = +2 Query: 257 VELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVV 418 VELYAE R AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV+ Sbjct: 138 VELYAEKFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI 191 Score = 55.2 bits (127), Expect = 2e-06 Identities = 27/35 (77%), Positives = 31/35 (88%) Frame = +3 Query: 147 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPE 251 EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLE 135 Score = 46.8 bits (106), Expect = 6e-04 Identities = 23/50 (46%), Positives = 32/50 (64%) Frame = +1 Query: 457 EVCRWTHDPLWRPLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 606 EV W +P++ +N+ RHVLL+QGVL IKVKI++ QG+ GP Sbjct: 189 EVIGWYIISSGQPVKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238 >UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia ATCC 50803 Length = 217 Score = 77.0 bits (181), Expect = 5e-13 Identities = 34/78 (43%), Positives = 52/78 (66%) Frame = +2 Query: 263 LYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 442 ++ + + RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR Q Sbjct: 92 IWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQ 151 Query: 443 RAKSMKFVDGLMIHSGDP 496 RA++ KF +G +I +G P Sbjct: 152 RARANKFKEGCLISTGHP 169 Score = 41.5 bits (93), Expect = 0.022 Identities = 20/68 (29%), Positives = 38/68 (55%) Frame = +3 Query: 36 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 215 K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++ Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75 Query: 216 TSVVQKRF 239 ++ RF Sbjct: 76 EYLLAGRF 83 Score = 35.1 bits (77), Expect = 1.9 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +1 Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLP 579 P + L ATRH+ +RQGV+G+KV+I P Sbjct: 169 PKRIFLAEATRHIKMRQGVIGVKVRIYNP 197 >UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia elegans|Rep: Putative ribosomal protein S3 - Zinnia elegans (Zinnia) Length = 143 Score = 73.3 bits (172), Expect = 6e-12 Identities = 32/53 (60%), Positives = 42/53 (79%) Frame = +1 Query: 490 RPLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 648 +P++ +++A RHVLLRQGVLGIKVKIML WD GK GPK P PD++++ PK Sbjct: 19 QPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71 Score = 36.3 bits (80), Expect = 0.83 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 440 QRAKSMKFVDGLMIHSGDPCNDY 508 QRAKSMKF DG M+ SG P +Y Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEY 24 >UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 149 Score = 69.3 bits (162), Expect = 1e-10 Identities = 33/45 (73%), Positives = 39/45 (86%) Frame = +3 Query: 90 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 224 +++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60 >UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 286 Score = 66.5 bits (155), Expect = 7e-10 Identities = 31/46 (67%), Positives = 38/46 (82%) Frame = +3 Query: 90 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 227 ++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+ Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184 >UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_85, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 514 Score = 66.1 bits (154), Expect = 9e-10 Identities = 32/45 (71%), Positives = 37/45 (82%) Frame = +3 Query: 90 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 224 ++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450 Score = 42.7 bits (96), Expect = 0.010 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = +3 Query: 90 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185 ++ EDGYS ++V+VT +R EIII ATRTQ+ L Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312 >UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarchaeota|Rep: 30S ribosomal protein S3P - Pyrococcus furiosus Length = 210 Score = 65.7 bits (153), Expect = 1e-09 Identities = 28/72 (38%), Positives = 49/72 (68%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 +R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63 Query: 210 ELTSVVQKRFNI 245 ELT +++K+F + Sbjct: 64 ELTRILEKQFGL 75 Score = 63.7 bits (148), Expect = 5e-09 Identities = 34/79 (43%), Positives = 46/79 (58%) Frame = +2 Query: 260 ELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 439 ++ E + L A QA L L G+ RRA Y LR IM +GARG E+ +SGKL G Sbjct: 79 QIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTG 138 Query: 440 QRAKSMKFVDGLMIHSGDP 496 +RAKS++F G + G+P Sbjct: 139 ERAKSIRFYQGYLAKVGNP 157 >UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarchaeota|Rep: 30S ribosomal protein S3P - Methanosarcina acetivorans Length = 318 Score = 65.3 bits (152), Expect = 2e-09 Identities = 36/91 (39%), Positives = 52/91 (57%) Frame = +2 Query: 233 AIQHSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCE 412 A ++S ++ A+ V L A A L + G R+A + LR +M +GA GCE Sbjct: 70 ANKYSLENPQIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCE 129 Query: 413 VVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 505 VV+SGKL G R++ KFVDG + HSG+P + Sbjct: 130 VVISGKLTGARSRVEKFVDGYIKHSGNPVEE 160 Score = 60.9 bits (141), Expect = 3e-08 Identities = 25/72 (34%), Positives = 48/72 (66%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 ++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63 Query: 210 ELTSVVQKRFNI 245 +LT V ++++ Sbjct: 64 KLTRDVANKYSL 75 >UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces capsulatus NAm1|Rep: Predicted protein - Ajellomyces capsulatus NAm1 Length = 151 Score = 64.9 bits (151), Expect = 2e-09 Identities = 32/46 (69%), Positives = 37/46 (80%) Frame = +3 Query: 18 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 155 +ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129 >UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobacteriaceae|Rep: 30S ribosomal protein S3P - Haloarcula marismortui (Halobacterium marismortui) Length = 304 Score = 64.1 bits (149), Expect = 4e-09 Identities = 24/77 (31%), Positives = 53/77 (68%) Frame = +3 Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200 ++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+ Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 201 RIRELTSVVQKRFNIPE 251 IR++T+ ++ RFN+ + Sbjct: 61 NIRKITTELEDRFNLDD 77 Score = 50.0 bits (114), Expect = 6e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155 Query: 491 DPCND 505 +P + Sbjct: 156 EPAEE 160 >UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P - Archaeoglobus fulgidus Length = 229 Score = 62.5 bits (145), Expect = 1e-08 Identities = 31/62 (50%), Positives = 41/62 (66%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154 Query: 491 DP 496 DP Sbjct: 155 DP 156 Score = 47.2 bits (107), Expect = 4e-04 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 +RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+ Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63 Query: 210 ELTSVVQKRFNI 245 LT + K F I Sbjct: 64 ALTEKL-KDFGI 74 >UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methanopyrus kandleri|Rep: 30S ribosomal protein S3P - Methanopyrus kandleri Length = 227 Score = 62.1 bits (144), Expect = 1e-08 Identities = 29/66 (43%), Positives = 44/66 (66%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163 Query: 491 DPCNDY 508 +P ++Y Sbjct: 164 EPGDEY 169 Score = 60.1 bits (139), Expect = 6e-08 Identities = 29/79 (36%), Positives = 44/79 (55%) Frame = +3 Query: 3 IMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 182 +M N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R Sbjct: 2 VMYGENVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIA 61 Query: 183 LGEKGRRIRELTSVVQKRF 239 +G +GR IR + VQ+RF Sbjct: 62 IGRRGRNIRRVEEEVQERF 80 >UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) Length = 234 Score = 61.7 bits (143), Expect = 2e-08 Identities = 30/62 (48%), Positives = 40/62 (64%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 AE L L G R+A +R IMESGA GCEV+V+GKL G R+++ KF +G + H G Sbjct: 96 AERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCG 155 Query: 491 DP 496 +P Sbjct: 156 EP 157 Score = 58.8 bits (136), Expect = 1e-07 Identities = 24/72 (33%), Positives = 47/72 (65%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 ++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63 Query: 210 ELTSVVQKRFNI 245 +LT + ++I Sbjct: 64 QLTQDLATDYDI 75 >UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methanococcus|Rep: 30S ribosomal protein S3P - Methanococcus maripaludis Length = 211 Score = 59.3 bits (137), Expect = 1e-07 Identities = 29/90 (32%), Positives = 49/90 (54%) Frame = +2 Query: 227 TEAIQHSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 406 T A ++S ++ + V L + L G+ R+ + +R +M SGA+G Sbjct: 67 TLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKG 126 Query: 407 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 496 ++VSGKL G+R+++ KF+DG M H G+P Sbjct: 127 VAIIVSGKLSGERSRTEKFMDGYMKHCGEP 156 Score = 54.0 bits (124), Expect = 4e-06 Identities = 22/72 (30%), Positives = 43/72 (59%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 +R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++ Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62 Query: 210 ELTSVVQKRFNI 245 ELT + +++ Sbjct: 63 ELTETLATEYSV 74 >UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methanobacteriaceae|Rep: 30S ribosomal protein S3P - Methanobacterium thermoautotrophicum Length = 258 Score = 58.0 bits (134), Expect = 2e-07 Identities = 22/72 (30%), Positives = 48/72 (66%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 ++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62 Query: 210 ELTSVVQKRFNI 245 +T ++ +F++ Sbjct: 63 AITQKLKNKFDL 74 Score = 55.2 bits (127), Expect = 2e-06 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A + L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154 Query: 491 DP 496 +P Sbjct: 155 EP 156 >UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein S3P - Ignicoccus hospitalis KIN4/I Length = 241 Score = 57.2 bits (132), Expect = 4e-07 Identities = 25/81 (30%), Positives = 53/81 (65%) Frame = +3 Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185 M+V + K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++ Sbjct: 1 MSVAKKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAII 60 Query: 186 GEKGRRIRELTSVVQKRFNIP 248 G +G+ I+++T V+++ F IP Sbjct: 61 GRRGQTIKQITKVLEEWFGIP 81 Score = 52.4 bits (120), Expect = 1e-05 Identities = 31/67 (46%), Positives = 39/67 (58%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 472 L A A L L G RRA Y LR IM +GA G +V VSGKLRG+RA+ K++ G Sbjct: 95 LDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAG 154 Query: 473 LMIHSGD 493 + SG+ Sbjct: 155 KVYKSGN 161 >UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus solfataricus Length = 229 Score = 56.8 bits (131), Expect = 5e-07 Identities = 25/72 (34%), Positives = 43/72 (59%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+ Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64 Query: 210 ELTSVVQKRFNI 245 +L + +K F + Sbjct: 65 QLAQIFEKVFGL 76 Score = 46.0 bits (104), Expect = 0.001 Identities = 26/66 (39%), Positives = 37/66 (56%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 472 L A A L L G RRA + +R IM +GA G E+++SGKL +RA+ K +G Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEG 150 Query: 473 LMIHSG 490 ++ SG Sbjct: 151 IVYKSG 156 >UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P - Thermofilum pendens (strain Hrk 5) Length = 202 Score = 54.4 bits (125), Expect = 3e-06 Identities = 30/73 (41%), Positives = 41/73 (56%) Frame = +2 Query: 278 VATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSM 457 V + L A A + L+ G+ RRA L IM +GARG E+V+SGKL QR ++ Sbjct: 86 VPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTE 145 Query: 458 KFVDGLMIHSGDP 496 KF G + SG+P Sbjct: 146 KFTRGYVPKSGEP 158 Score = 47.2 bits (107), Expect = 4e-04 Identities = 23/71 (32%), Positives = 38/71 (53%) Frame = +3 Query: 33 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 212 RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+ Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65 Query: 213 LTSVVQKRFNI 245 + V+++ F I Sbjct: 66 IAEVLEREFGI 76 >UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolobaceae|Rep: 30S ribosomal protein S3P - Sulfolobus acidocaldarius Length = 231 Score = 53.6 bits (123), Expect = 5e-06 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+ Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64 Query: 210 ELTSVVQKRFNI 245 +L V++K F + Sbjct: 65 QLAQVLEKFFGL 76 Score = 49.2 bits (112), Expect = 1e-04 Identities = 30/66 (45%), Positives = 36/66 (54%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 472 L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150 Query: 473 LMIHSG 490 + SG Sbjct: 151 TVYKSG 156 >UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 414 Score = 53.2 bits (122), Expect = 7e-06 Identities = 25/47 (53%), Positives = 36/47 (76%) Frame = +3 Query: 90 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 230 ++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V + Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284 >UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermoprotei|Rep: 30S ribosomal protein S3P - Cenarchaeum symbiosum Length = 261 Score = 51.2 bits (117), Expect = 3e-05 Identities = 25/60 (41%), Positives = 37/60 (61%) Frame = +3 Query: 66 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 245 +L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++ Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75 Score = 38.3 bits (85), Expect = 0.21 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 341 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAG 156 >UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella natans|Rep: Ribosomal protein S3 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 262 Score = 49.6 bits (113), Expect = 8e-05 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +2 Query: 353 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 508 R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND+ Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDW 209 >UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermoplasmatales|Rep: 30S ribosomal protein S3P - Thermoplasma acidophilum Length = 225 Score = 48.4 bits (110), Expect = 2e-04 Identities = 18/73 (24%), Positives = 43/73 (58%) Frame = +3 Query: 27 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 206 K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++ Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61 Query: 207 RELTSVVQKRFNI 245 +++T ++K++ I Sbjct: 62 QQMTDTLEKKYGI 74 Score = 43.6 bits (98), Expect = 0.005 Identities = 21/62 (33%), Positives = 38/62 (61%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154 Query: 491 DP 496 +P Sbjct: 155 EP 156 >UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphylothermus marinus F1|Rep: 30S ribosomal protein S3P - Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) Length = 224 Score = 47.2 bits (107), Expect = 4e-04 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +2 Query: 353 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGD 493 RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGD 159 Score = 45.2 bits (102), Expect = 0.002 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +3 Query: 30 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 209 K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66 Query: 210 ELTSVVQKRFNI 245 +L +++Q F + Sbjct: 67 KLMTIMQTHFGL 78 >UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental samples|Rep: Ribosomal protein S3 - uncultured marine group II euryarchaeote DeepAnt-JyKC7 Length = 307 Score = 45.2 bits (102), Expect = 0.002 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 472 L A A L L G RRA + + IM++GARGC +++SGK+ G R + KF G Sbjct: 94 LNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQG 153 Query: 473 LMIHSGD 493 + G+ Sbjct: 154 HIKFCGE 160 Score = 41.1 bits (92), Expect = 0.029 Identities = 20/71 (28%), Positives = 37/71 (52%) Frame = +3 Query: 33 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 212 R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68 Query: 213 LTSVVQKRFNI 245 L ++ F + Sbjct: 69 LQYRLKSDFKL 79 >UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum aerophilum Length = 218 Score = 44.4 bits (100), Expect = 0.003 Identities = 19/71 (26%), Positives = 40/71 (56%) Frame = +3 Query: 33 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 212 +K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71 Query: 213 LTSVVQKRFNI 245 +++++ + + Sbjct: 72 ISNILTTKLGV 82 Score = 42.3 bits (95), Expect = 0.013 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +2 Query: 341 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIG 165 >UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga maquilingensis IC-167|Rep: Ribosomal protein S3-like - Caldivirga maquilingensis IC-167 Length = 226 Score = 44.0 bits (99), Expect = 0.004 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +2 Query: 341 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAG 153 Score = 41.5 bits (93), Expect = 0.022 Identities = 16/71 (22%), Positives = 40/71 (56%) Frame = +3 Query: 33 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 212 ++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++ Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62 Query: 213 LTSVVQKRFNI 245 L +++ +FN+ Sbjct: 63 LADILKSKFNL 73 >UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P - Nanoarchaeum equitans Length = 230 Score = 41.5 bits (93), Expect = 0.022 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = +2 Query: 347 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 490 A RR L IM +GA G E+V++G+L GQR K+ +F G + +G Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155 >UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus radiodurans Length = 249 Score = 41.5 bits (93), Expect = 0.022 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%) Frame = +2 Query: 245 SRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 424 S TV + + + A A + ++ A RRA + +MESGARG +V++S Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155 Query: 425 GKLRG-QRAKSMKFVDG-LMIHSGDPCNDYSTLL 520 G+L G ++A++ K ++G + +H+ DY T L Sbjct: 156 GRLGGAEQARTEKVLEGRVPLHTLRADIDYGTAL 189 >UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; Pichia guilliermondii|Rep: Putative uncharacterized protein - Pichia guilliermondii (Yeast) (Candida guilliermondii) Length = 278 Score = 40.3 bits (90), Expect = 0.051 Identities = 22/74 (29%), Positives = 43/74 (58%) Frame = -3 Query: 505 IIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKLV 326 ++ ++RVDHE++ L G+ ++Q +N T T H ++++T+ +++ +T +L Sbjct: 105 VVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHTVGGSSHWQTVQQLG 164 Query: 325 S*RFGLGDSAKATS 284 FGL DS+ TS Sbjct: 165 FQGFGL-DSSGQTS 177 >UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bacteroidetes|Rep: 30S ribosomal protein S3 - Porphyromonas gingivalis (Bacteroides gingivalis) Length = 246 Score = 37.5 bits (83), Expect = 0.36 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 469 L A AE++ +L G +A RRA + M GA G ++ VSG+L G + A+S F + Sbjct: 110 LDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKE 169 Query: 470 G 472 G Sbjct: 170 G 170 >UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC precursor - Enterococcus faecalis (Streptococcus faecalis) Length = 545 Score = 35.5 bits (78), Expect = 1.4 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +3 Query: 39 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 158 FVGDG F+ + EFL +L E+ G++V +TP+ + + + Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435 >UniRef50_Q6ZS94 Cluster: CDNA FLJ45717 fis, clone FELNG2001613; n=1; Homo sapiens|Rep: CDNA FLJ45717 fis, clone FELNG2001613 - Homo sapiens (Human) Length = 237 Score = 35.5 bits (78), Expect = 1.4 Identities = 18/47 (38%), Positives = 19/47 (40%) Frame = +3 Query: 528 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 668 CAS RS R Q Q P P A RP PG+ APR Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160 >UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus oeni (strain BAA-331 / PSU-1) Length = 267 Score = 35.5 bits (78), Expect = 1.4 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Frame = +2 Query: 191 ERTQNP*AHFRSTEAIQHSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYG 370 ER ++ + T QH R + + + L A + + L +A RRA G Sbjct: 86 ERLRSELSKIVDTYKGQHKRVNINIVE--IRKPDLNAHLVGQQIAADLERRVAFRRAMRG 143 Query: 371 VLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYS 511 ++ + +GA+G +VSG+L G A+ ++ +G + +H+ DYS Sbjct: 144 AIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTVPLHTLRADIDYS 192 >UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein; n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical protein - Rattus norvegicus Length = 328 Score = 34.3 bits (75), Expect = 3.3 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +1 Query: 307 PGRISKIQAYRRSRCTSCLLWCSPFHH 387 PGR +A RRSRC+ C W HH Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266 >UniRef50_UPI00005A065A Cluster: PREDICTED: similar to interferon-induced protein with tetratricopeptide repeats 1-like; n=4; Eutheria|Rep: PREDICTED: similar to interferon-induced protein with tetratricopeptide repeats 1-like - Canis familiaris Length = 464 Score = 33.9 bits (74), Expect = 4.4 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +1 Query: 229 RSDSTFQSNCRIVC*RGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 402 + + QS+ R + G Y+W L Y GR+++ QAY +C+ + +P + + CP Sbjct: 73 QQEHDIQSDVRSLVTWGNYAW-LYYHMGRLAEAQAYLDKVENTCMKFAAPSCYRMECP 129 >UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma mobile Length = 225 Score = 33.9 bits (74), Expect = 4.4 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = +2 Query: 293 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 469 L AI AE + KL R A +R M+SGA+G + VSG+L G A+S + + Sbjct: 115 LNAIILAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSE 174 Query: 470 GLM 478 G M Sbjct: 175 GEM 177 >UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2; Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 - Oltmannsiellopsis viridis (Marine flagellate) Length = 235 Score = 33.9 bits (74), Expect = 4.4 Identities = 25/74 (33%), Positives = 35/74 (47%) Frame = +2 Query: 218 FRSTEAIQHSRATVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 397 FR+ + + A V L V + AI AE L +L +A RRA VL I Sbjct: 103 FRAKNGVSPT-AKVALQVTTVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDR 161 Query: 398 ARGCEVVVSGKLRG 439 +G ++ VSG+L G Sbjct: 162 VQGAKIQVSGRLNG 175 >UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp. BAL39 Length = 281 Score = 33.1 bits (72), Expect = 7.7 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = +2 Query: 311 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 484 AE + +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H Sbjct: 116 AEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLH 175 Query: 485 SGDPCNDYS 511 + DY+ Sbjct: 176 TFRADIDYA 184 >UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress) Length = 295 Score = 33.1 bits (72), Expect = 7.7 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -2 Query: 218 SELTDSASFLSEHTLCPGGHNNDLRADGSD 129 SEL + + LSEH+L GH +L ADG D Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284 >UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carota|Rep: Glycine-rich protein - Daucus carota (Carrot) Length = 111 Score = 33.1 bits (72), Expect = 7.7 Identities = 13/35 (37%), Positives = 14/35 (40%) Frame = +1 Query: 367 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 471 W P G WC W C IW S C+ RW Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 762,435,337 Number of Sequences: 1657284 Number of extensions: 16121253 Number of successful extensions: 55010 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 51762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 54895 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 63381147830 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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