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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30594
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28)       159   2e-39
SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9)             36   0.027
SB_5097| Best HMM Match : GARS_A (HMM E-Value=0)                       33   0.33 
SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)                  31   1.0  
SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012)                 31   1.4  
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)                 29   3.1  
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)                 29   4.1  
SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)                      29   4.1  
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.1  
SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31)       29   4.1  
SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)           29   4.1  
SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.5  
SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_56796| Best HMM Match : CITED (HMM E-Value=1.2)                     28   7.2  
SB_53228| Best HMM Match : CITED (HMM E-Value=2.5)                     28   7.2  
SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)                 28   7.2  
SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)                 28   7.2  
SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3)             28   7.2  
SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)            28   7.2  
SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)                       28   7.2  
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.2  
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)                 28   9.5  
SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0)                28   9.5  
SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28)
          Length = 240

 Score =  159 bits (387), Expect = 2e-39
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +2

Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
           +VELYAE VATRGLCAIAQ ESLRYKLIGGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
           RGQRAKSMKFVDGLM+H+G+P   Y
Sbjct: 143 RGQRAKSMKFVDGLMVHAGEPTTHY 167



 Score =  144 bits (349), Expect = 7e-35
 Identities = 70/77 (90%), Positives = 74/77 (96%)
 Frame = +3

Query: 21  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTPIR+EIII+ATRTQ+VLGEKGR
Sbjct: 5   ISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGR 64

Query: 201 RIRELTSVVQKRFNIPE 251
           RIRELTSVVQKRF  PE
Sbjct: 65  RIRELTSVVQKRFGFPE 81



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = +1

Query: 508 LNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 681
           ++TA RHV LRQGVLGIKVKIMLPWD  GK GPKKP PD + + EPKDE VP +PTSE
Sbjct: 168 VDTAVRHVYLRQGVLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPTSE 225


>SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9)
          Length = 482

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = +3

Query: 573 VAVGPARQERPEEATTRPHPGNRAQGRARA 662
           VA GPAR   PE   TRPHPG    GR  A
Sbjct: 107 VAAGPARITSPEPPATRPHPGRVEAGRRLA 136


>SB_5097| Best HMM Match : GARS_A (HMM E-Value=0)
          Length = 893

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 395 GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYSTLL 520
           G  G  +V+  KL G+    + F DG  I +  P  D+ TLL
Sbjct: 183 GDAGSTIVIEEKLEGEEFSVLAFTDGKTIAAMPPAQDHKTLL 224


>SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)
          Length = 301

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +3

Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662
           PAR   PE   TRPHPG    GR  A
Sbjct: 42  PARVTSPEPPATRPHPGRVEAGRRLA 67


>SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012)
          Length = 1115

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +3

Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662
           PAR   PE   TRPHPG    GR  A
Sbjct: 537 PARITSPEPPATRPHPGRVEAGRRLA 562


>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
          Length = 1851

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 576  AVGPARQERPEEATTRPHPGNRAQGRA 656
            A   AR   PE   TRPHPG    GRA
Sbjct: 1497 AARDARITSPEPPATRPHPGRVEAGRA 1523


>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 58  SRQNSMSSSLGSWPRTATPAWKCGSLPSARRSLLWPPGH-RVCSERKDAESVSSLP*Y 228
           +R+  ++ +L + P T     +CG + +AR  L+  P H R        + V SLP Y
Sbjct: 272 TRKMMLTRALSTTPSTTPELRRCGGVLTAREGLIMSPNHPRPYPSDTHCKWVISLPSY 329


>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
          Length = 988

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +3

Query: 543 RSTRNQGQNHVAVGPA--RQERPEEATTRPHPGNRAQGRARA 662
           +  R   +  VA  PA  R   PE   TRPHPG    GR  A
Sbjct: 801 KQRREPARTPVAALPAAARVTSPEPPATRPHPGRVEAGRRLA 842


>SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)
          Length = 401

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 424 WQAAWSTCQINEVCRWTHDPLW 489
           W+ AW+ C + E   +T++P W
Sbjct: 76  WKQAWTPCSLQETTIYTNNPPW 97


>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3889

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 738 ILSDSGDRLRQRRGREGAHFAGRLEGHGL 652
           +LS +GD +R   GRE  HF   +  HGL
Sbjct: 769 VLSSNGDFIRSFGGRESMHFRYCVYSHGL 797


>SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31)
          Length = 976

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 418 CIWQAAWSTCQINEVCRWTHDPLWRP 495
           C W + W   +  E   WTH P  RP
Sbjct: 185 CRWLSQWKQSEEEESVLWTHSPARRP 210


>SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 228

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +1

Query: 283 YSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCPW 405
           Y+W L + P  +  ++ Y R    +  L C+P  +  W  W
Sbjct: 4   YNWWLAWNPALLCLMRQYNRWLAWNPALLCNPRQYNRWLAW 44


>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
          Length = 426

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 546 STRNQGQNHVAVGPARQERPEEATTRP 626
           +++N  + H  + PA+QE+PE  + +P
Sbjct: 162 TSKNTSRTHKIIAPAKQEKPERYSRKP 188


>SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 509

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +3

Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662
           P R   PE   TRPHPG    GR  A
Sbjct: 185 PPRITSPEPPATRPHPGRVEAGRRLA 210


>SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1091

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 820 AARDARITSPEPPATRPHPGRVEAGRRLA 848


>SB_56796| Best HMM Match : CITED (HMM E-Value=1.2)
          Length = 431

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 42  AARDARITSPEPPATRPHPGRVEAGRRLA 70


>SB_53228| Best HMM Match : CITED (HMM E-Value=2.5)
          Length = 417

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 168 AARDARITSPEPPATRPHPGRVEAGRRLA 196


>SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)
          Length = 804

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662
           AR   PE   TRPHPG    GR  A
Sbjct: 604 ARVTSPEPPATRPHPGRVEAGRRLA 628


>SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)
          Length = 771

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 386 AARDARITSPEPPATRPHPGRVEAGRRLA 414


>SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1134

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 RPEEATTRPHPGNRAQGRARA 662
           RPE   TRPHPG    GR  A
Sbjct: 546 RPEPPATRPHPGRVEAGRRLA 566


>SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3)
          Length = 220

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 42  AARDARITSPEPPATRPHPGRVEAGRRLA 70


>SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)
          Length = 599

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 425 AARDARITSPEPPATRPHPGRVEAGRRLA 453


>SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 284 AARDARITSPEPPATRPHPGRVEAGRRLA 312


>SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1492

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 588  ARQERPEEATTRPHPGNRAQGRARA 662
            AR   PE   TRPHPG    GR  A
Sbjct: 1351 ARITSPEPPATRPHPGRVGAGRRLA 1375


>SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)
          Length = 522

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662
           AR   PE   TRPHPG    GR  A
Sbjct: 181 ARVTSPEPPATRPHPGRVEAGRRLA 205


>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1109

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662
           A   AR   PE   TRPHPG    GR  A
Sbjct: 781 AAHDARITSPEPPATRPHPGRVEAGRRLA 809


>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
          Length = 519

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 680 SLVGSRGTGSSLGSVTRMWSGCGFFGPFLPCW 585
           S+  S G GSSLGS+ R W       P    W
Sbjct: 215 SIASSLGLGSSLGSMGRDWGRMSTNSPSFQSW 246


>SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
          Length = 772

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 277 PFSIQFYSCSGMLNRFCTTEVSSRILRPFSPSTLCV 170
           P   ++Y C G       T V+  +LRPFSPS L V
Sbjct: 337 PACYRYYCCQGSTYVLFLTNVTL-LLRPFSPSFLIV 371


>SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 957

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662
           AR   PE   TRPHPG    GR  A
Sbjct: 792 ARITSPEPPATRPHPGRVEAGRRLA 816


>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1929

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 553  GIKVKIMLPWDQQGKNGPKKPQ-PDHILVTEPKDEPVPLEPTSEVRS 690
            G+K+K+ML  D+ G + P  P+ P       P +   P E  S  +S
Sbjct: 1628 GLKIKLMLKKDRSGGSSPVSPRSPSPCEPRLPLESRSPFESNSSFQS 1674


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,845,416
Number of Sequences: 59808
Number of extensions: 522084
Number of successful extensions: 1717
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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