BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30594 (762 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28) 159 2e-39 SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9) 36 0.027 SB_5097| Best HMM Match : GARS_A (HMM E-Value=0) 33 0.33 SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) 31 1.0 SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012) 31 1.4 SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 29 3.1 SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 29 4.1 SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) 29 4.1 SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31) 29 4.1 SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 29 4.1 SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5 SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_56796| Best HMM Match : CITED (HMM E-Value=1.2) 28 7.2 SB_53228| Best HMM Match : CITED (HMM E-Value=2.5) 28 7.2 SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027) 28 7.2 SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) 28 7.2 SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3) 28 7.2 SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) 28 7.2 SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) 28 7.2 SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 28 9.5 SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 28 9.5 SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5 >SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28) Length = 240 Score = 159 bits (387), Expect = 2e-39 Identities = 75/85 (88%), Positives = 80/85 (94%) Frame = +2 Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433 +VELYAE VATRGLCAIAQ ESLRYKLIGGLAVRRACYGVLRFIMESGA+GCEVVVSGKL Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508 RGQRAKSMKFVDGLM+H+G+P Y Sbjct: 143 RGQRAKSMKFVDGLMVHAGEPTTHY 167 Score = 144 bits (349), Expect = 7e-35 Identities = 70/77 (90%), Positives = 74/77 (96%) Frame = +3 Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200 ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTPIR+EIII+ATRTQ+VLGEKGR Sbjct: 5 ISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGR 64 Query: 201 RIRELTSVVQKRFNIPE 251 RIRELTSVVQKRF PE Sbjct: 65 RIRELTSVVQKRFGFPE 81 Score = 96.3 bits (229), Expect = 2e-20 Identities = 42/58 (72%), Positives = 47/58 (81%) Frame = +1 Query: 508 LNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 681 ++TA RHV LRQGVLGIKVKIMLPWD GK GPKKP PD + + EPKDE VP +PTSE Sbjct: 168 VDTAVRHVYLRQGVLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPTSE 225 >SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9) Length = 482 Score = 36.3 bits (80), Expect = 0.027 Identities = 17/30 (56%), Positives = 17/30 (56%) Frame = +3 Query: 573 VAVGPARQERPEEATTRPHPGNRAQGRARA 662 VA GPAR PE TRPHPG GR A Sbjct: 107 VAAGPARITSPEPPATRPHPGRVEAGRRLA 136 >SB_5097| Best HMM Match : GARS_A (HMM E-Value=0) Length = 893 Score = 32.7 bits (71), Expect = 0.33 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 395 GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYSTLL 520 G G +V+ KL G+ + F DG I + P D+ TLL Sbjct: 183 GDAGSTIVIEEKLEGEEFSVLAFTDGKTIAAMPPAQDHKTLL 224 >SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) Length = 301 Score = 31.1 bits (67), Expect = 1.0 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662 PAR PE TRPHPG GR A Sbjct: 42 PARVTSPEPPATRPHPGRVEAGRRLA 67 >SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012) Length = 1115 Score = 30.7 bits (66), Expect = 1.4 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662 PAR PE TRPHPG GR A Sbjct: 537 PARITSPEPPATRPHPGRVEAGRRLA 562 >SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) Length = 1851 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRA 656 A AR PE TRPHPG GRA Sbjct: 1497 AARDARITSPEPPATRPHPGRVEAGRA 1523 >SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 58 SRQNSMSSSLGSWPRTATPAWKCGSLPSARRSLLWPPGH-RVCSERKDAESVSSLP*Y 228 +R+ ++ +L + P T +CG + +AR L+ P H R + V SLP Y Sbjct: 272 TRKMMLTRALSTTPSTTPELRRCGGVLTAREGLIMSPNHPRPYPSDTHCKWVISLPSY 329 >SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) Length = 988 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +3 Query: 543 RSTRNQGQNHVAVGPA--RQERPEEATTRPHPGNRAQGRARA 662 + R + VA PA R PE TRPHPG GR A Sbjct: 801 KQRREPARTPVAALPAAARVTSPEPPATRPHPGRVEAGRRLA 842 >SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) Length = 401 Score = 29.1 bits (62), Expect = 4.1 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = +1 Query: 424 WQAAWSTCQINEVCRWTHDPLW 489 W+ AW+ C + E +T++P W Sbjct: 76 WKQAWTPCSLQETTIYTNNPPW 97 >SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3889 Score = 29.1 bits (62), Expect = 4.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 738 ILSDSGDRLRQRRGREGAHFAGRLEGHGL 652 +LS +GD +R GRE HF + HGL Sbjct: 769 VLSSNGDFIRSFGGRESMHFRYCVYSHGL 797 >SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31) Length = 976 Score = 29.1 bits (62), Expect = 4.1 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = +1 Query: 418 CIWQAAWSTCQINEVCRWTHDPLWRP 495 C W + W + E WTH P RP Sbjct: 185 CRWLSQWKQSEEEESVLWTHSPARRP 210 >SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 228 Score = 29.1 bits (62), Expect = 4.1 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = +1 Query: 283 YSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCPW 405 Y+W L + P + ++ Y R + L C+P + W W Sbjct: 4 YNWWLAWNPALLCLMRQYNRWLAWNPALLCNPRQYNRWLAW 44 >SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) Length = 426 Score = 29.1 bits (62), Expect = 4.1 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = +3 Query: 546 STRNQGQNHVAVGPARQERPEEATTRP 626 +++N + H + PA+QE+PE + +P Sbjct: 162 TSKNTSRTHKIIAPAKQEKPERYSRKP 188 >SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 509 Score = 28.7 bits (61), Expect = 5.5 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 585 PARQERPEEATTRPHPGNRAQGRARA 662 P R PE TRPHPG GR A Sbjct: 185 PPRITSPEPPATRPHPGRVEAGRRLA 210 >SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1091 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 820 AARDARITSPEPPATRPHPGRVEAGRRLA 848 >SB_56796| Best HMM Match : CITED (HMM E-Value=1.2) Length = 431 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 42 AARDARITSPEPPATRPHPGRVEAGRRLA 70 >SB_53228| Best HMM Match : CITED (HMM E-Value=2.5) Length = 417 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 168 AARDARITSPEPPATRPHPGRVEAGRRLA 196 >SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027) Length = 804 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662 AR PE TRPHPG GR A Sbjct: 604 ARVTSPEPPATRPHPGRVEAGRRLA 628 >SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) Length = 771 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 386 AARDARITSPEPPATRPHPGRVEAGRRLA 414 >SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1134 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 600 RPEEATTRPHPGNRAQGRARA 662 RPE TRPHPG GR A Sbjct: 546 RPEPPATRPHPGRVEAGRRLA 566 >SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3) Length = 220 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 42 AARDARITSPEPPATRPHPGRVEAGRRLA 70 >SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) Length = 599 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 425 AARDARITSPEPPATRPHPGRVEAGRRLA 453 >SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 284 AARDARITSPEPPATRPHPGRVEAGRRLA 312 >SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1492 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662 AR PE TRPHPG GR A Sbjct: 1351 ARITSPEPPATRPHPGRVGAGRRLA 1375 >SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) Length = 522 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662 AR PE TRPHPG GR A Sbjct: 181 ARVTSPEPPATRPHPGRVEAGRRLA 205 >SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1109 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 576 AVGPARQERPEEATTRPHPGNRAQGRARA 662 A AR PE TRPHPG GR A Sbjct: 781 AAHDARITSPEPPATRPHPGRVEAGRRLA 809 >SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) Length = 519 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -2 Query: 680 SLVGSRGTGSSLGSVTRMWSGCGFFGPFLPCW 585 S+ S G GSSLGS+ R W P W Sbjct: 215 SIASSLGLGSSLGSMGRDWGRMSTNSPSFQSW 246 >SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0) Length = 772 Score = 27.9 bits (59), Expect = 9.5 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -3 Query: 277 PFSIQFYSCSGMLNRFCTTEVSSRILRPFSPSTLCV 170 P ++Y C G T V+ +LRPFSPS L V Sbjct: 337 PACYRYYCCQGSTYVLFLTNVTL-LLRPFSPSFLIV 371 >SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 957 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 Query: 588 ARQERPEEATTRPHPGNRAQGRARA 662 AR PE TRPHPG GR A Sbjct: 792 ARITSPEPPATRPHPGRVEAGRRLA 816 >SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1929 Score = 27.9 bits (59), Expect = 9.5 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +1 Query: 553 GIKVKIMLPWDQQGKNGPKKPQ-PDHILVTEPKDEPVPLEPTSEVRS 690 G+K+K+ML D+ G + P P+ P P + P E S +S Sbjct: 1628 GLKIKLMLKKDRSGGSSPVSPRSPSPCEPRLPLESRSPFESNSSFQS 1674 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,845,416 Number of Sequences: 59808 Number of extensions: 522084 Number of successful extensions: 1717 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1545 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1713 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2082369341 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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