Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30594
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 165 2e-40
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 165 2e-40
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 165 2e-40
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 165 2e-40
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 165 2e-40
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 165 2e-40
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 165 2e-40
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 165 2e-40
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 165 2e-40
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 163 6e-40
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 161 2e-39
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 142 9e-34
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 142 9e-34
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 96 1e-19
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 36 0.21
X03557-1|CAA27244.1| 478|Homo sapiens protein ( Human mRNA for ... 30 7.8
BT006667-1|AAP35313.1| 478|Homo sapiens interferon-induced prot... 30 7.8
BC103867-1|AAI03868.1| 180|Homo sapiens RGS8 protein protein. 30 7.8
BC103866-1|AAI03867.1| 180|Homo sapiens RGS8 protein protein. 30 7.8
BC103865-1|AAI03866.1| 180|Homo sapiens RGS8 protein protein. 30 7.8
BC069677-1|AAH69677.1| 180|Homo sapiens RGS8 protein protein. 30 7.8
BC007091-1|AAH07091.1| 478|Homo sapiens interferon-induced prot... 30 7.8
AL353778-2|CAH72421.1| 180|Homo sapiens regulator of G-protein ... 30 7.8
AL353146-1|CAI12379.1| 478|Homo sapiens interferon-induced prot... 30 7.8
AF300649-1|AAG18443.1| 180|Homo sapiens regulator of G-protein ... 30 7.8
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 141 bits (342), Expect = 2e-33
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 27 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 86
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 87 RGQRAKSMKFVDGLMIHSGDPVNYY 111
Score = 37.1 bits (82), Expect = 0.068
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 192 KGRRIRELTSVVQKRFNIPE 251
+GRRIRELT+VVQKRF PE
Sbjct: 6 QGRRIRELTAVVQKRFGFPE 25
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVNYY 166
Score = 142 bits (343), Expect = 2e-33
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 201 RIRELTSVVQKRFNIPE 251
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
Query: 673 TSE 681
SE
Sbjct: 222 ISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVNYY 166
Score = 142 bits (343), Expect = 2e-33
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 21 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 200
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 201 RIRELTSVVQKRFNIPE 251
RIRELT+VVQKRF PE
Sbjct: 64 RIRELTAVVQKRFGFPE 80
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
Query: 673 TSE 681
SE
Sbjct: 222 ISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 165 bits (401), Expect = 2e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 163 bits (396), Expect = 6e-40
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 433
+VELYAE VATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 434 RGQRAKSMKFVDGLMIHSGDPCNDY 508
RGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYY 167
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
Query: 673 TSE 681
SE
Sbjct: 223 ISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 161 bits (391), Expect = 2e-39
Identities = 77/82 (93%), Positives = 79/82 (96%)
Frame = +2
Query: 263 LYAEGVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 442
LYAE VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 443 RAKSMKFVDGLMIHSGDPCNDY 508
RAKSMKFVDGLMIHSGDP N Y
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYY 82
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 78 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 137
Query: 673 TSE 681
SE
Sbjct: 138 ISE 140
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 142 bits (345), Expect = 9e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 6 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 185
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 186 GEKGRRIRELTSVVQKRFNIPE 251
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 66.9 bits (156), Expect = 7e-11
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +2
Query: 254 TVELYAEGVATRGLCAIAQAESLRYKLIGGLAVRR 358
+VELYAE VATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 96.3 bits (229), Expect = 1e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 493 PLQ*LLNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 672
P+ ++TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 37 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 96
Query: 673 TSE 681
SE
Sbjct: 97 ISE 99
Score = 83.0 bits (196), Expect = 1e-15
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2
Query: 386 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 508
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N Y
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYY 41
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 528 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 668
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>X03557-1|CAA27244.1| 478|Homo sapiens protein ( Human mRNA for
56-KDa protein induced by interferon. ).
Length = 478
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 247 QSNCRIVC*RGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 402
Q+N R + G ++W + Y GR+++ Q Y C +PF + + CP
Sbjct: 89 QANVRSLVTWGNFAW-MYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECP 139
>BT006667-1|AAP35313.1| 478|Homo sapiens interferon-induced protein
with tetratricopeptide repeats 1 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 247 QSNCRIVC*RGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 402
Q+N R + G ++W + Y GR+++ Q Y C +PF + + CP
Sbjct: 89 QANVRSLVTWGNFAW-MYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECP 139
>BC103867-1|AAI03868.1| 180|Homo sapiens RGS8 protein protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
>BC103866-1|AAI03867.1| 180|Homo sapiens RGS8 protein protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
>BC103865-1|AAI03866.1| 180|Homo sapiens RGS8 protein protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
>BC069677-1|AAH69677.1| 180|Homo sapiens RGS8 protein protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
>BC007091-1|AAH07091.1| 478|Homo sapiens interferon-induced protein
with tetratricopeptide repeats 1 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 247 QSNCRIVC*RGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 402
Q+N R + G ++W + Y GR+++ Q Y C +PF + + CP
Sbjct: 89 QANVRSLVTWGNFAW-MYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECP 139
>AL353778-2|CAH72421.1| 180|Homo sapiens regulator of G-protein
signalling 8 protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
>AL353146-1|CAI12379.1| 478|Homo sapiens interferon-induced protein
with tetratricopeptidemolog A (yeast) (TIMM17A) pseu
protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 247 QSNCRIVC*RGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 402
Q+N R + G ++W + Y GR+++ Q Y C +PF + + CP
Sbjct: 89 QANVRSLVTWGNFAW-MYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECP 139
>AF300649-1|AAG18443.1| 180|Homo sapiens regulator of G-protein
signaling protein.
Length = 180
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LRGQRAKSMKFVDGLMIHSGDPCNDYSTLLPD 526
L +R K M+ G + H D C+D++ +LPD
Sbjct: 5 LMPRRNKGMRTRLGCLSHKSDSCSDFTAILPD 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,793,665
Number of Sequences: 237096
Number of extensions: 2525486
Number of successful extensions: 11273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11272
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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