Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30593
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 116 1e-24
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 115 1e-24
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 111 3e-23
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 100 4e-20
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 93 1e-17
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 90 6e-17
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 88 2e-16
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 85 2e-15
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 83 1e-14
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 81 4e-14
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 78 3e-13
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 1e-12
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 71 3e-11
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 71 4e-11
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 69 1e-10
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 68 3e-10
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 68 3e-10
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 66 8e-10
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 64 4e-09
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 62 2e-08
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 61 3e-08
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 49 2e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 9e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 43 0.011
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.015
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 42 0.015
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 41 0.034
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 40 0.10
UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1; Pl... 38 0.31
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta... 38 0.31
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 38 0.41
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 37 0.55
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.55
UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus ory... 37 0.55
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 37 0.55
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.55
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 37 0.55
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j... 36 0.96
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 36 0.96
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 36 1.3
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 36 1.7
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 2.2
UniRef50_Q55BN0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m... 34 3.9
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 34 3.9
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 34 5.1
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 34 5.1
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 34 5.1
UniRef50_UPI00005A41AC Cluster: PREDICTED: hypothetical protein ... 33 6.8
UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A6R232 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 6.8
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 8.9
UniRef50_Q2TZP1 Cluster: Predicted RNA-binding protein homologou... 33 8.9
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 8.9
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 8.9
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 33 8.9
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 116 bits (278), Expect = 1e-24
Identities = 53/73 (72%), Positives = 63/73 (86%)
Frame = +2
Query: 260 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 439
QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK
Sbjct: 160 QVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLK 219
Query: 440 RPRFEISKLMELH 478
+P+FE+ KLMELH
Sbjct: 220 KPKFELGKLMELH 232
Score = 99 bits (238), Expect = 7e-20
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = +3
Query: 72 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 251
L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YA
Sbjct: 97 LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 156
Query: 252 QTLRSEQSERKCVK 293
Q + Q +K ++
Sbjct: 157 QHQQVRQIRKKMME 170
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 115 bits (277), Expect = 1e-24
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCY
Sbjct: 99 VLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCY 158
Query: 249 AQ 254
AQ
Sbjct: 159 AQ 160
Score = 105 bits (253), Expect = 1e-21
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVL
Sbjct: 162 SQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVL 221
Query: 437 KRPRFEISKLMELH 478
K+PRF++S LMELH
Sbjct: 222 KKPRFDLSSLMELH 235
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 111 bits (266), Expect = 3e-23
Identities = 51/78 (65%), Positives = 62/78 (79%)
Frame = +2
Query: 245 LRPDTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 424
L D IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RK
Sbjct: 102 LTSDKITSQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRK 161
Query: 425 VKVLKRPRFEISKLMELH 478
VK+LK+P+FE+ KLMELH
Sbjct: 162 VKMLKKPKFELGKLMELH 179
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 100 bits (240), Expect = 4e-20
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCY
Sbjct: 491 VLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCY 550
Query: 249 AQTLRSEQSERK 284
AQ+ + Q RK
Sbjct: 551 AQSSQIRQIRRK 562
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q+R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+L
Sbjct: 554 SQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKIL 613
Query: 437 KRPRFEISKLMELH 478
K P+F++ KLME+H
Sbjct: 614 KAPKFDLGKLMEVH 627
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT Y
Sbjct: 95 VLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSY 154
Query: 249 AQTLRSEQSERKCVKSLHAT 308
A+T R + +K V L T
Sbjct: 155 AKTSRVKAIRKKMVDILTET 174
Score = 53.6 bits (123), Expect = 6e-06
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGI 394
++V+AIRKKM +I+T V++++L+ VV+ LI ++A+ I I
Sbjct: 158 SRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSI 217
Query: 395 YPLRDVCIRKVKVLKRPRFEISKLMELH 478
+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 218 FPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 90.2 bits (214), Expect = 6e-17
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+L
Sbjct: 159 SQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLL 218
Query: 437 KRPRFEISKLMELH 478
K+P+F++ L+ LH
Sbjct: 219 KQPKFDLGGLLALH 232
Score = 81.4 bits (192), Expect = 3e-14
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +3
Query: 72 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 251
L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA
Sbjct: 97 LTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYA 156
Query: 252 QTLRSEQSERKCVKSLHATSLT 317
+ + RK + + + T
Sbjct: 157 ASSQIRAIRRKMTEIIQREAST 178
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/73 (54%), Positives = 58/73 (79%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA++
Sbjct: 102 FHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSA 161
Query: 261 RSEQSERKCVKSL 299
+ ++ RK + +L
Sbjct: 162 QIKKI-RKIMNNL 173
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/78 (56%), Positives = 52/78 (66%)
Frame = +3
Query: 60 RHQVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 239
RH L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+
Sbjct: 20 RH-CLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKS 77
Query: 240 TCYAQTLRSEQSERKCVK 293
YAQT R ++ + V+
Sbjct: 78 HAYAQTTRIKKLRAEIVE 95
Score = 75.4 bits (177), Expect = 2e-12
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVL
Sbjct: 84 TRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVL 143
Query: 437 KRPRFEISKLMELH 478
K+P+ ++ +++ELH
Sbjct: 144 KKPKLDLGRILELH 157
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 82.6 bits (195), Expect = 1e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 338 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 478
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 47
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 80.6 bits (190), Expect = 4e-14
Identities = 32/58 (55%), Positives = 47/58 (81%)
Frame = +2
Query: 305 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 478
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 72 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 212
L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T
Sbjct: 82 LTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = +3
Query: 78 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCY 248
+F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCY
Sbjct: 102 SFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCY 161
Query: 249 AQTLRSEQSERK 284
A++ + RK
Sbjct: 162 AKSSQVRAIRRK 173
Score = 66.9 bits (156), Expect = 6e-10
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +2
Query: 218 GLLEPTQDVLRPDTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 397
G T +QVRAIR+K+ IT + + E LI + K IEK I+
Sbjct: 152 GKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIF 211
Query: 398 PLRDVCIRKVKVLKRPRFEISKLMELH 478
PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 212 PLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/46 (84%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Frame = +2
Query: 659 PSFYNVVTGKTLALPNLIALQHIPLSPAG-**RRGPTDRPSQQLRS 793
PSFYNVVTGKTLALPNLIALQHIPLSPAG TDRPSQQLRS
Sbjct: 7 PSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRS 52
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +3
Query: 78 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQT 257
+F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ
Sbjct: 98 SFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQR 157
Query: 258 LRSEQSERKCVK 293
+ + +K V+
Sbjct: 158 SQIKDIRKKIVE 169
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/74 (36%), Positives = 52/74 (70%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++
Sbjct: 158 SQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLV 217
Query: 437 KRPRFEISKLMELH 478
KRP+ + KL E +
Sbjct: 218 KRPKVDAQKLREFY 231
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 70.9 bits (166), Expect = 4e-11
Identities = 36/88 (40%), Positives = 56/88 (63%)
Frame = +3
Query: 36 WIPRAAGIRHQVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 215
W AAG +V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT
Sbjct: 83 WRSIAAG--SEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTK 140
Query: 216 KDSLSQRKTCYAQTLRSEQSERKCVKSL 299
K + S + YA + ++ Q +K+L
Sbjct: 141 KLANSHKNHTYANSHKARQVRDVMIKAL 168
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +1
Query: 616 YPIRPIVSRITIHWAVVLQRRDWENPGVTQLNRXAAHPPFASW 744
YP+ +S AVVLQRRDWENPGVTQLNR AAHPPFASW
Sbjct: 55 YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPFASW 97
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 68.9 bits (161), Expect = 1e-10
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CY
Sbjct: 99 LLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCY 158
Query: 249 AQ 254
A+
Sbjct: 159 AK 160
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/72 (29%), Positives = 47/72 (65%)
Frame = +2
Query: 263 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 442
V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++
Sbjct: 164 VKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRT 223
Query: 443 PRFEISKLMELH 478
P+F+ L+ H
Sbjct: 224 PKFDAQALLSAH 235
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 68.1 bits (159), Expect = 3e-10
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 634 VSRITIHWAVVLQRRDWENPGVTQLNRXAAHPPFASW 744
++ IT AVVLQRRDWENPGVTQLNR AAHPPFASW
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 37
Score = 34.3 bits (75), Expect = 3.9
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 764 TDRPSQQLRS*NGEWQ 811
TDRPSQQLRS NGEW+
Sbjct: 45 TDRPSQQLRSLNGEWR 60
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +1
Query: 619 PIRPIVSRITIHWAVVLQRRDWENPGVTQLNRXAAHPPFASW 744
P+ ++ AVVLQRRDWENPGVTQLNR AAHPPFASW
Sbjct: 14 PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPFASW 55
Score = 34.3 bits (75), Expect = 3.9
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 764 TDRPSQQLRS*NGEWQ 811
TDRPSQQLRS NGEW+
Sbjct: 63 TDRPSQQLRSLNGEWR 78
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 66.5 bits (155), Expect = 8e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 658 AVVLQRRDWENPGVTQLNRXAAHPPFASW 744
AVVLQRRDWENPGVTQLNR AAHPPFASW
Sbjct: 23 AVVLQRRDWENPGVTQLNRLAAHPPFASW 51
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 254
F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY +
Sbjct: 52 FDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVK 109
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/58 (32%), Positives = 40/58 (68%)
Frame = +2
Query: 266 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 439
+ IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 114 KKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +3
Query: 63 HQVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 242
++ FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT
Sbjct: 90 NECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKT 149
Query: 243 CYAQTLRSEQSERK 284
Y + + R+
Sbjct: 150 VYINSSQKRALRRR 163
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/61 (31%), Positives = 41/61 (67%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV+
Sbjct: 155 SQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVV 214
Query: 437 K 439
+
Sbjct: 215 E 215
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +3
Query: 72 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 251
L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 97 LTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHV 156
Query: 252 Q 254
+
Sbjct: 157 K 157
Score = 38.7 bits (86), Expect = 0.18
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +2
Query: 263 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 442
+R +R + E + ++ + +V KL + + +A I RDV IR+VKV+KR
Sbjct: 161 IRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKR 220
Query: 443 PRFEISKLMELH 478
PR + L +H
Sbjct: 221 PRNTMELLSTMH 232
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 48.8 bits (111), Expect = 2e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 664 VLQRRDWENPGVTQLNRXAAHPPFASW 744
+L RRDWENP +TQ +R AHPPF SW
Sbjct: 18 ILSRRDWENPQITQYHRLEAHPPFHSW 44
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 9e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 87 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 236
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
Score = 36.3 bits (80), Expect = 0.96
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q++AIR+ M +I+ + + ++ + + I ++ I + IYPLR V IRK +V
Sbjct: 132 SQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVE 191
Query: 437 KRP 445
P
Sbjct: 192 AMP 194
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 658 AVVLQRRDWENPGVTQLNRXAAHPPFASWLIAKRPHR-SPFPTVAQL--KWRMA 810
A +L R DW+NP +T +NR +H P W A R R P V L +W+ +
Sbjct: 19 ATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQFS 72
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.7 bits (96), Expect = 0.011
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRK 424
+Q RAIRK+M ++I + + E + + + +SI + I++A IYP+R IRK
Sbjct: 125 SQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRK 184
Query: 425 VKVLKRP 445
+VL+ P
Sbjct: 185 TEVLEEP 191
Score = 37.5 bits (83), Expect = 0.41
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRKTCYAQT 257
F G L D +R +V++ + I+ IDV T DGY +RV + FT + + SQ++ +
Sbjct: 75 FEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTSQQRAIRKEM 134
Query: 258 LR-SEQSERKC 287
+ E++ ++C
Sbjct: 135 FKVIEENAKEC 145
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 42.3 bits (95), Expect = 0.015
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +2
Query: 404 RDVCIRKVKVLKRPRFEISKLMELH 478
R +C++KVK+LK+P+FE+ KLMELH
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELH 87
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 42.3 bits (95), Expect = 0.015
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1
Query: 664 VLQRRDWENPGVTQLNRXAAHPPFASW 744
VL R DW N +T LNR AHP FASW
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASW 43
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 41.1 bits (92), Expect = 0.034
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 272 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 451
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 141 IRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEE 200
Query: 452 EISKLM 469
+I +L+
Sbjct: 201 KIVELV 206
Score = 38.7 bits (86), Expect = 0.18
Identities = 20/67 (29%), Positives = 40/67 (59%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT + +
Sbjct: 86 FIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKTEIRKKI 145
Query: 261 RSEQSER 281
+ +E+
Sbjct: 146 QEYLTEK 152
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 39.5 bits (88), Expect = 0.10
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 260 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 439
Q A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK
Sbjct: 142 QKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLK 201
Query: 440 RP 445
P
Sbjct: 202 YP 203
>UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1;
Plantago major|Rep: Monodehydroascorbate reductase -
Plantago major (Common plantain)
Length = 151
Score = 37.9 bits (84), Expect = 0.31
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 RSRTSGSPGLQEFGTRCSATSTAWTSQPISSGG-WLKNGRL 141
RSRTSGSPGLQEFGTR S G W+ G+L
Sbjct: 10 RSRTSGSPGLQEFGTRVGEVIHFGDFSGSSFGAYWVHKGQL 50
>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
Plantago major|Rep: Plasma memebrane H+-ATPase -
Plantago major (Common plantain)
Length = 106
Score = 37.9 bits (84), Expect = 0.31
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 5 SPRWRXALELVDPPGCRNSAPG 70
SP ALELVDPPGCRNSA G
Sbjct: 4 SPAVAAALELVDPPGCRNSARG 25
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 37.5 bits (83), Expect = 0.41
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q RAIR M +I+ ++ + + + + + +I K IYP+R V IRK+++L
Sbjct: 135 SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELL 194
Query: 437 KRP 445
P
Sbjct: 195 AEP 197
Score = 34.3 bits (75), Expect = 3.9
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
F +LT + L + ++ + IE +DV T DGY LRV + FT + + +K +
Sbjct: 85 FWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIM 144
Query: 261 R 263
R
Sbjct: 145 R 145
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +1
Query: 604 GGARYPIRPIVSRITIHWAVVLQRRDWENPGVTQLNRXAAHPPF 735
GGAR PI P I A L+RR+ +NPG QLN A P F
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLF 82
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 601 RGGARYPIRPIVSRIT 648
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 657
Score = 37.1 bits (82), Expect = 0.55
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -2
Query: 520 QTCLGFPLASTAFAVKFHQLRDLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQL 341
Q C+GFP + A +R LET P H +S +AQR++A+ L + G+ + +
Sbjct: 23 QRCVGFPTCANCNAANEPCIR-LETSPSWHHAMSKGALAQRIEALEAHLSAITEGLPSNI 81
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 37.1 bits (82), Expect = 0.55
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 78 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 218
+F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 80 SFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 93 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 239
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.1 bits (82), Expect = 0.55
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRK 424
+Q AIRK M EI+ + S L E++ ++ S+A I+++ IYPLR V I K
Sbjct: 129 SQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAK 188
Query: 425 VKVLKRP 445
K+L P
Sbjct: 189 SKLLWVP 195
Score = 34.7 bits (76), Expect = 2.9
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
F G +L D +R + ++ + + +V T DGY LRV + FT + + +K+ + +
Sbjct: 79 FKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTSQKSAIRKVM 138
Query: 261 RS--EQSERK 284
+ EQ R+
Sbjct: 139 QEIVEQKARE 148
>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09205 protein - Schistosoma
japonicum (Blood fluke)
Length = 215
Score = 36.3 bits (80), Expect = 0.96
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 23 ALELVDPPGCRNSAPGA 73
ALELVDPPGCRNSA G+
Sbjct: 10 ALELVDPPGCRNSARGS 26
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 36.3 bits (80), Expect = 0.96
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
T IRK + + + + S+ +V I I D+ IYPLR V I K+KVL
Sbjct: 137 THKHLIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVL 196
Query: 437 KRPR 448
+ PR
Sbjct: 197 EYPR 200
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q +AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL
Sbjct: 130 SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL 189
Query: 437 KRPRFEI 457
P EI
Sbjct: 190 -TPTTEI 195
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 764 TDRPSQQLRS*NGEWQIV 817
TDRPSQQLRS NGEW+++
Sbjct: 55 TDRPSQQLRSLNGEWRLM 72
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+Q +AIR+ M +++ + ++++ ++ ++ I IYPLR V I+K +
Sbjct: 129 SQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLE 188
Query: 437 KRP 445
RP
Sbjct: 189 ARP 191
Score = 34.7 bits (76), Expect = 2.9
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 93 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
+LT D LR +V++ + +EA I V TTD Y +++ + T K + + ++ +T+
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKAIRRTM 138
>UniRef50_Q55BN0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1662
Score = 34.3 bits (75), Expect = 3.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 185 STCLLHWFHQ*GLLEPTQDVLRPDTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 364
ST + H Q +EP +++L P Q ++ K+ IIT + T S+ +++NK I
Sbjct: 419 STIVHHLLSQSASIEPIKELLFPQVQSNTLKSKIISIIT-EATISKTMQLLNKYPNQIIE 477
Query: 365 KDIE 376
IE
Sbjct: 478 NQIE 481
>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
melanogaster|Rep: Elastin like protein - Drosophila
melanogaster (Fruit fly)
Length = 110
Score = 34.3 bits (75), Expect = 3.9
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 23 ALELVDPPGCRNSA 64
ALELVDPPGCRNSA
Sbjct: 9 ALELVDPPGCRNSA 22
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 34.3 bits (75), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 664 VLQRRDWENPGVTQLNRXAAHPP 732
++ RRDWENP Q+N+ AH P
Sbjct: 7 IINRRDWENPITVQVNQVKAHSP 29
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 66 QVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 212
++ F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 82 RLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
Score = 33.1 bits (72), Expect = 8.9
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 260 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 439
Q IRK M +++ + E V ++I ++A +I I PLR I K KVL
Sbjct: 138 QATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLF 197
Query: 440 RPRFEISK 463
P + K
Sbjct: 198 APLIKEGK 205
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 33.9 bits (74), Expect = 5.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 272 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 442
+R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 137 VRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 33.9 bits (74), Expect = 5.1
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 664 VLQRRDWENPGVTQLNRXAAHPP 732
VL+R+DWENP V+ NR H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_UPI00005A41AC Cluster: PREDICTED: hypothetical protein
XP_853124; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_853124 - Canis familiaris
Length = 311
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 607 GARYPIRPIVSRITIHWAVVLQR-RDWENPGVTQLNRXAAHPPFASWLIAKRPHRSPFPT 783
G R P RP + ++HWA + R+ T+ + A PP W A+ HRS +P
Sbjct: 112 GGRAPGRPRAKQASVHWAAANPKSREGGRSERTEQDATNAPPPAPGWRGARGGHRS-YPP 170
Query: 784 V 786
V
Sbjct: 171 V 171
>UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 606
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -1
Query: 506 LPP----CLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQ 360
LPP C R R P+T R S + P CKHR+ + P PW+
Sbjct: 241 LPPTAIGCALRPRCFAPATDEPRLNGSHSPPPKSCKHRSSSKSASGPDDIPWR 293
>UniRef50_A6R232 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1177
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 43 PG-LQEFGTRCSATSTAWTSQPISSGGWLKNGRLSSKPT 156
PG L + G C ATSTAW S+ + G W N SK T
Sbjct: 628 PGTLSQAGNLCVATSTAWDSKAV-MGAWWANANQVSKTT 665
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 643 YDSL*GELGTGPPLE 599
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_Q2TZP1 Cluster: Predicted RNA-binding protein homologous
to eukaryotic snRNP; n=13; Pezizomycotina|Rep: Predicted
RNA-binding protein homologous to eukaryotic snRNP -
Aspergillus oryzae
Length = 1103
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 49 LQEFGTRCSATSTAWTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYV 192
L + G C ATS+AW S+ + S W++ +++ + PM F V
Sbjct: 611 LSQAGNLCVATSSAWDSKAVMSAWWVQASQITKTAEVGGLLPMGDFLV 658
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQTL 260
F G TTD +R M+++ + I+A+ VKT D +++ + T + + S ++ Q +
Sbjct: 83 FTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQKYMRQVI 142
Query: 261 RSEQSERKCVKS 296
+E KS
Sbjct: 143 NDLLAETAAEKS 154
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 81 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 239
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 254 DTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 433
+T+ IRK + + I + E V LI D I D+ A IYPL+ + +RK ++
Sbjct: 132 NTKKFQIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSEL 191
Query: 434 LKRPRFEISKLMELH 478
+ +S + E+H
Sbjct: 192 V-----SLSGISEIH 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,072,387
Number of Sequences: 1657284
Number of extensions: 18251750
Number of successful extensions: 49237
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 47109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49230
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -