Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30593
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.99 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   4.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 370 HREGLPWHLPSARCLHPKGESVEEAPFRDLEVDG 471
           HRE + W + + R ++ +GES   + +R L  +G
Sbjct: 290 HREDVRWVMIALRQMYDRGESKGSSCYRLLSRNG 323


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 228 SRSPYW*NQCRRHVERIHRLSSHQCWLR*ESAIF*PST*AYRL*G---PCRGSCRAPGA 61
           +  P+  ++CR    R H L  H+C    E A   P+  A R  G     RG+ RA GA
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKCGGE-EEAERAPAP-AVRAAGDAAAARGAARADGA 299


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 431 LSPFGCKHRAEGRCHGRPSRCP 366
           L P+    R   RCHG    CP
Sbjct: 336 LWPYTMYFRMPHRCHGNLQSCP 357


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 118 GWLKNGRLSS 147
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 307 VACNDFTHFLSDCSDLSVW 251
           ++C DF     DC+  S W
Sbjct: 19  LSCKDFDTLYRDCTTASSW 37


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = +1

Query: 649  IHWAVVLQRRDWENPGVTQLNRXAAHPPFASWLIAKRP-HRSPFPT 783
            +HW    +  DW      +  +    P  +SW    +P +R P  T
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTT 1180


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 413 CIRKVKVLKRPRFEISKLME 472
           C+R     KRP+FE S   E
Sbjct: 192 CLRTCSSAKRPKFENSSCDE 211


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 622 IRPIVSRITIHWAVVLQRRDWENP 693
           IRP+     I  ++ L RR  ENP
Sbjct: 484 IRPMYDAFLIDQSLALNRRRDENP 507


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 622 IRPIVSRITIHWAVVLQRRDWENP 693
           IRP+     I  ++ L RR  ENP
Sbjct: 484 IRPMYDAFLIDQSLALNRRRDENP 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,232
Number of Sequences: 336
Number of extensions: 4351
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)