Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30593
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   113   6e-27
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.94 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   6.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   8.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.7  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  113 bits (272), Expect = 6e-27
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 69  VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
           VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCY
Sbjct: 99  VLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCY 158

Query: 249 AQ 254
           AQ
Sbjct: 159 AQ 160



 Score =  105 bits (253), Expect = 1e-24
 Identities = 48/74 (64%), Positives = 62/74 (83%)
 Frame = +2

Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
           +Q++ IR KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKVL
Sbjct: 162 SQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVL 221

Query: 437 KRPRFEISKLMELH 478
           K+PRF++S LMELH
Sbjct: 222 KKPRFDLSSLMELH 235



 Score = 30.3 bits (65), Expect = 0.076
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 523 RPEGYEPPVQESV 561
           RPEGYEPPVQ SV
Sbjct: 257 RPEGYEPPVQASV 269


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 394 LPSARCLHPKGESVEEAPFRDLEVDGT 474
           +P   C H  G ++E+A    LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 424 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 338
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 316 VSDVACNDFTHFLSDCSDLSVW 251
           + ++ C  FT   S C  LSVW
Sbjct: 187 IQEICCRFFTFSSSLCCFLSVW 208


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -1

Query: 449 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 333
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,104
Number of Sequences: 2352
Number of extensions: 18505
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)