Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30593
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 114 2e-25
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 114 2e-25
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 114 2e-25
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 114 2e-25
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 112 7e-25
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 105 1e-22
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 34 0.21
Z11723-2|CAA77786.1| 811|Drosophila melanogaster DNA binding pr... 29 7.9
Z11723-1|CAA77785.1| 813|Drosophila melanogaster DNA binding pr... 29 7.9
X71626-1|CAA50633.1| 813|Drosophila melanogaster tramtrack p88 ... 29 7.9
BT025183-1|ABF00108.1| 487|Drosophila melanogaster IP15250p pro... 29 7.9
AE014297-4783|AAN14282.1| 813|Drosophila melanogaster CG1856-PE... 29 7.9
AE014297-4782|AAF57179.1| 813|Drosophila melanogaster CG1856-PB... 29 7.9
AE014297-4781|AAF57180.1| 813|Drosophila melanogaster CG1856-PA... 29 7.9
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 114 bits (274), Expect = 2e-25
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 249 AQ 254
AQ
Sbjct: 159 AQ 160
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVV 337
+QVR IR +M +IIT +V+ ++L++++
Sbjct: 162 SQVRKIRARMTDIITNEVSGADLKQLL 188
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 249 AQ 254
AQ
Sbjct: 159 AQ 160
Score = 105 bits (251), Expect = 1e-22
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVL
Sbjct: 162 SQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVL 221
Query: 437 KRPRFEISKLMELH 478
K+PRF++SKL+ELH
Sbjct: 222 KKPRFDVSKLLELH 235
Score = 32.3 bits (70), Expect = 0.85
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ERPEGYEPPVQESV 561
+RPEGYEPPVQE+V
Sbjct: 255 DRPEGYEPPVQEAV 268
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 114 bits (274), Expect = 2e-25
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 49 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 108
Query: 249 AQ 254
AQ
Sbjct: 109 AQ 110
Score = 105 bits (251), Expect = 1e-22
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVL
Sbjct: 112 SQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVL 171
Query: 437 KRPRFEISKLMELH 478
K+PRF++SKL+ELH
Sbjct: 172 KKPRFDVSKLLELH 185
Score = 32.3 bits (70), Expect = 0.85
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ERPEGYEPPVQESV 561
+RPEGYEPPVQE+V
Sbjct: 205 DRPEGYEPPVQEAV 218
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 99 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158
Query: 249 AQ 254
AQ
Sbjct: 159 AQ 160
Score = 105 bits (251), Expect = 1e-22
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVL
Sbjct: 162 SQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVL 221
Query: 437 KRPRFEISKLMELH 478
K+PRF++SKL+ELH
Sbjct: 222 KKPRFDVSKLLELH 235
Score = 32.3 bits (70), Expect = 0.85
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ERPEGYEPPVQESV 561
+RPEGYEPPVQE+V
Sbjct: 255 DRPEGYEPPVQEAV 268
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 112 bits (269), Expect = 7e-25
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = +3
Query: 69 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 248
VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCY
Sbjct: 100 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 159
Query: 249 A 251
A
Sbjct: 160 A 160
Score = 102 bits (244), Expect = 7e-22
Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 DTQVRAIRK-KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 430
++QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVK
Sbjct: 162 ESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVK 221
Query: 431 VLKRPRFEISKLMELHXXXXXXXXXXXTSLNGR-RATSLPFK 553
VLK+PRF++SKL+ELH S G ++T+L K
Sbjct: 222 VLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAPKSTALKVK 263
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 105 bits (251), Expect = 1e-22
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = +2
Query: 257 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 436
+QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVL
Sbjct: 57 SQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVL 116
Query: 437 KRPRFEISKLMELH 478
K+PRF++SKL+ELH
Sbjct: 117 KKPRFDVSKLLELH 130
Score = 97.1 bits (231), Expect = 3e-20
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = +3
Query: 90 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 254
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQ 55
Score = 32.3 bits (70), Expect = 0.85
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 520 ERPEGYEPPVQESV 561
+RPEGYEPPVQE+V
Sbjct: 150 DRPEGYEPPVQEAV 163
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 34.3 bits (75), Expect = 0.21
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 23 ALELVDPPGCRNSA 64
ALELVDPPGCRNSA
Sbjct: 9 ALELVDPPGCRNSA 22
>Z11723-2|CAA77786.1| 811|Drosophila melanogaster DNA binding
protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 363 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 405
>Z11723-1|CAA77785.1| 813|Drosophila melanogaster DNA binding
protein protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
>X71626-1|CAA50633.1| 813|Drosophila melanogaster tramtrack p88
protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
>BT025183-1|ABF00108.1| 487|Drosophila melanogaster IP15250p
protein.
Length = 487
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
>AE014297-4783|AAN14282.1| 813|Drosophila melanogaster CG1856-PE,
isoform E protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
>AE014297-4782|AAF57179.1| 813|Drosophila melanogaster CG1856-PB,
isoform B protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
>AE014297-4781|AAF57180.1| 813|Drosophila melanogaster CG1856-PA,
isoform A protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 520 ERPEGYEPPVQESV*LNNENXXXXXXTRGGARYPIRPIVSRIT 648
+ P +P ++++ NN N RGGA+ P P +RIT
Sbjct: 365 QTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPATRIT 407
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,231,376
Number of Sequences: 53049
Number of extensions: 866514
Number of successful extensions: 2161
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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