Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30591
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28) 161 3e-40
SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9) 33 0.15
SB_5097| Best HMM Match : GARS_A (HMM E-Value=0) 30 1.4
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) 29 3.2
SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31) 29 3.2
SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 29 3.2
SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) 28 5.6
SB_45126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012) 28 7.4
SB_10998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_55955| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_55460| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_53830| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_51993| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_48637| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_44589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_37074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_35876| Best HMM Match : Histone (HMM E-Value=5.1) 27 9.8
SB_30057| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_23531| Best HMM Match : Histone (HMM E-Value=8.9e-09) 27 9.8
SB_21880| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_20370| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_18391| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_17374| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_13453| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_8948| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_4426| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_3841| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_59571| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_58125| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_57761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_56157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_55483| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_55375| Best HMM Match : Histone (HMM E-Value=9.2e-35) 27 9.8
SB_54709| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_53175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_51431| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_49908| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_48866| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_48698| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_47677| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_45363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_43396| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_42599| Best HMM Match : DUF536 (HMM E-Value=7.2) 27 9.8
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_38339| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_33151| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_25703| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_20764| Best HMM Match : Protamine_3 (HMM E-Value=9.6) 27 9.8
SB_19243| Best HMM Match : Histone (HMM E-Value=1e-16) 27 9.8
SB_19242| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_18626| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_17756| Best HMM Match : Histone (HMM E-Value=8.5e-41) 27 9.8
SB_17103| Best HMM Match : Histone (HMM E-Value=0.65) 27 9.8
SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_15200| Best HMM Match : Histone (HMM E-Value=0.22) 27 9.8
SB_14746| Best HMM Match : Histone (HMM E-Value=4.4e-32) 27 9.8
SB_13396| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_7960| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_7640| Best HMM Match : Histone (HMM E-Value=4.80001e-41) 27 9.8
SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39) 27 9.8
SB_4579| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 9.8
SB_512| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28)
Length = 240
Score = 161 bits (392), Expect = 3e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +3
Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
SVELYAEKVATRGLCAIAQ ESLRYKLIGGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 435 RGQRAKSMKFVDGLMIHSGDP 497
RGQRAKSMKFVDGLM+H+G+P
Sbjct: 143 RGQRAKSMKFVDGLMVHAGEP 163
Score = 144 bits (349), Expect = 5e-35
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +1
Query: 22 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 201
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTPIR+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGR 64
Query: 202 RIRELTSVVQKRFNIPE 252
RIRELTSVVQKRF PE
Sbjct: 65 RIRELTSVVQKRFGFPE 81
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +2
Query: 509 VNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
V+TA RHV LRQGVLGIKVKIMLPWD GK GPKKP PD + +
Sbjct: 168 VDTAVRHVYLRQGVLGIKVKIMLPWDPTGKTGPKKPLPDQVSI 210
>SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9)
Length = 482
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1
Query: 574 VAVGPARQERPEEATTRPHPG 636
VA GPAR PE TRPHPG
Sbjct: 107 VAAGPARITSPEPPATRPHPG 127
>SB_5097| Best HMM Match : GARS_A (HMM E-Value=0)
Length = 893
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 396 GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND*STLL 521
G G +V+ KL G+ + F DG I + P D TLL
Sbjct: 183 GDAGSTIVIEEKLEGEEFSVLAFTDGKTIAAMPPAQDHKTLL 224
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 59 SRQNSMSSSLGSWPRTATPAWKCGSLPSARRSLLWPPGH-RVCSERKDAESVSSLP*Y 229
+R+ ++ +L + P T +CG + +AR L+ P H R + V SLP Y
Sbjct: 272 TRKMMLTRALSTTPSTTPELRRCGGVLTAREGLIMSPNHPRPYPSDTHCKWVISLPSY 329
>SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)
Length = 401
Score = 29.1 bits (62), Expect = 3.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 425 WQAAWSTCQINEVCRWTHDPLW 490
W+ AW+ C + E +T++P W
Sbjct: 76 WKQAWTPCSLQETTIYTNNPPW 97
>SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31)
Length = 976
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 419 CIWQAAWSTCQINEVCRWTHDPLWRP 496
C W + W + E WTH P RP
Sbjct: 185 CRWLSQWKQSEEEESVLWTHSPARRP 210
>SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 284 YSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCPW 406
Y+W L + P + ++ Y R + L C+P + W W
Sbjct: 4 YNWWLAWNPALLCLMRQYNRWLAWNPALLCNPRQYNRWLAW 44
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 547 STRNQGQNHVAVGPARQERPEEATTRP 627
+++N + H + PA+QE+PE + +P
Sbjct: 162 TSKNTSRTHKIIAPAKQEKPERYSRKP 188
>SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)
Length = 301
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 586 PARQERPEEATTRPHPG 636
PAR PE TRPHPG
Sbjct: 42 PARVTSPEPPATRPHPG 58
>SB_45126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 296 KATSSHLFSIQFYRCSGMLNRFCTTEVSSRIL 201
K + H +I F R M+ R CTT+ S+ ++
Sbjct: 60 KLQNDHQAAIAFKRAKSMVGRSCTTQTSTLVI 91
>SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012)
Length = 1115
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 586 PARQERPEEATTRPHPG 636
PAR PE TRPHPG
Sbjct: 537 PARITSPEPPATRPHPG 553
>SB_10998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 296 KATSSHLFSIQFYRCSGMLNRFCTTEVSSRIL 201
K + H +I F R M+ R CTT+ S+ ++
Sbjct: 60 KLQNDHQAAIAFKRAKSMVGRSCTTQTSTLVI 91
>SB_55955| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_55460| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_53830| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_51993| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_48637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_44589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_37074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_35876| Best HMM Match : Histone (HMM E-Value=5.1)
Length = 157
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_30057| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 260
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 158 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 192
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 252 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 124
LWN++ + + F + H+ C GG N D A GS+ H
Sbjct: 186 LWNIKDRVLERKYQGVTQGFYTIHS-CFGGVNQDFLASGSEDH 227
>SB_23531| Best HMM Match : Histone (HMM E-Value=8.9e-09)
Length = 110
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_21880| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_20370| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_18391| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_17374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_13453| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_8948| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_4426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_3841| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_59571| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_58125| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_57761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_56157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_55483| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_55375| Best HMM Match : Histone (HMM E-Value=9.2e-35)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_54709| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_53175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_51431| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_49908| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_48866| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 205
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 103 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 137
>SB_48698| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_47677| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_45363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_43396| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 131
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 29 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 63
>SB_42599| Best HMM Match : DUF536 (HMM E-Value=7.2)
Length = 120
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 ELNEFLTRELAE-DGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN 243
E+ E + + +AE +G SG EV+ ++ + ++ +TQ E ++ +EL + +KR N
Sbjct: 20 EVIEVVNKLIAEGEGESGNEVKENKVKKKPSVIK-QTQ----EDEKKTKELEELKEKRIN 74
Query: 244 IPE 252
+P+
Sbjct: 75 LPQ 77
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 258 QMLWNVESLLYYGSELTDSASFLSEHTLCPGGHNN 154
+ L NV+SLL GS++ S + + H + P G N
Sbjct: 214 ECLNNVKSLLTTGSDVVTSTTVMQRHLMPPPGKPN 248
>SB_38339| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_33151| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_25703| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_20764| Best HMM Match : Protamine_3 (HMM E-Value=9.6)
Length = 68
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_19243| Best HMM Match : Histone (HMM E-Value=1e-16)
Length = 117
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_19242| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_18626| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_17756| Best HMM Match : Histone (HMM E-Value=8.5e-41)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_17103| Best HMM Match : Histone (HMM E-Value=0.65)
Length = 97
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 558 IPSTPCLRSTCLVAVLTNHCKGLQSGS*VHLQTSLIWHVDHAACQIQQLHNHGHQI 391
I P L C V V T HCKG++ G Q +W Q + +H Q+
Sbjct: 553 IKFNPELYGACNVDVET-HCKGIKEGQAQVAQCVSVWSHSPQVVQCVSVWSHSPQV 607
>SB_15200| Best HMM Match : Histone (HMM E-Value=0.22)
Length = 97
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_14746| Best HMM Match : Histone (HMM E-Value=4.4e-32)
Length = 162
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_13396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_7960| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_7640| Best HMM Match : Histone (HMM E-Value=4.80001e-41)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39)
Length = 370
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_4579| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>SB_512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 278 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 382
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,602,292
Number of Sequences: 59808
Number of extensions: 462140
Number of successful extensions: 1432
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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