SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30591
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14992-1|AAB60338.1|  243|Homo sapiens ribosomal protein S3 prot...   167   2e-41
U14991-1|AAB60337.1|  243|Homo sapiens ribosomal protein S3 prot...   167   2e-41
U14990-1|AAB60336.1|  243|Homo sapiens ribosomal protein S3 prot...   167   2e-41
S42658-1|AAB19349.2|  243|Homo sapiens S3 ribosomal protein prot...   167   2e-41
BC150501-1|AAI50502.1|  133|Homo sapiens Unknown (protein for IM...   167   2e-41
BC100284-1|AAI00285.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
BC071917-1|AAH71917.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
BC034149-1|AAH34149.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
BC013196-1|AAH13196.1|  242|Homo sapiens Unknown (protein for IM...   167   2e-41
BC003577-1|AAH03577.1|  242|Homo sapiens Unknown (protein for IM...   167   2e-41
BC003137-1|AAH03137.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
AY791291-1|AAV40835.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
AB061838-1|BAB79476.1|  243|Homo sapiens ribosomal protein S3 pr...   167   2e-41
AK223048-1|BAD96768.1|  243|Homo sapiens ribosomal protein S3 va...   166   7e-41
X55715-1|CAA39248.1|  243|Homo sapiens protein ( Human Hums3 mRN...   165   9e-41
AF281313-1|AAF82383.1|  158|Homo sapiens ribosomal protein S3 pr...   162   8e-40
L16016-1|AAA18095.1|   95|Homo sapiens ribosomal protein S3 prot...   142   7e-34
BC071669-1|AAH71669.1|  117|Homo sapiens RPS3 protein protein.        142   7e-34
AB062288-1|BAB93471.1|  117|Homo sapiens IMR-90 ribosomal protei...    81   2e-15
AK127619-1|BAC87060.1|  237|Homo sapiens protein ( Homo sapiens ...    31   2.6  

>U14992-1|AAB60338.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>U14991-1|AAB60337.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>U14990-1|AAB60336.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>S42658-1|AAB19349.2|  243|Homo sapiens S3 ribosomal protein
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  141 bits (342), Expect = 2e-33
 Identities = 70/82 (85%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>BC150501-1|AAI50502.1|  133|Homo sapiens Unknown (protein for
           IMAGE:40134452) protein.
          Length = 133

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 27  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 86

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 87  RGQRAKSMKFVDGLMIHSGDPVN 109



 Score = 37.1 bits (82), Expect = 0.053
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +1

Query: 193 KGRRIRELTSVVQKRFNIPE 252
           +GRRIRELT+VVQKRF  PE
Sbjct: 6   QGRRIRELTAVVQKRFGFPE 25


>BC100284-1|AAI00285.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>BC071917-1|AAH71917.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>BC034149-1|AAH34149.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>BC013196-1|AAH13196.1|  242|Homo sapiens Unknown (protein for
           IMAGE:4347401) protein.
          Length = 242

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVN 164



 Score =  142 bits (343), Expect = 1e-33
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = +1

Query: 22  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 201
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4   ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63

Query: 202 RIRELTSVVQKRFNIPE 252
           RIRELT+VVQKRF  PE
Sbjct: 64  RIRELTAVVQKRFGFPE 80



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 209


>BC003577-1|AAH03577.1|  242|Homo sapiens Unknown (protein for
           IMAGE:3544292) protein.
          Length = 242

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 82  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 142 RGQRAKSMKFVDGLMIHSGDPVN 164



 Score =  142 bits (343), Expect = 1e-33
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = +1

Query: 22  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 201
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4   ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63

Query: 202 RIRELTSVVQKRFNIPE 252
           RIRELT+VVQKRF  PE
Sbjct: 64  RIRELTAVVQKRFGFPE 80



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 162 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 209


>BC003137-1|AAH03137.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>AY791291-1|AAV40835.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>AB061838-1|BAB79476.1|  243|Homo sapiens ribosomal protein S3
           protein.
          Length = 243

 Score =  167 bits (407), Expect = 2e-41
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>AK223048-1|BAD96768.1|  243|Homo sapiens ribosomal protein S3
           variant protein.
          Length = 243

 Score =  166 bits (403), Expect = 7e-41
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>X55715-1|CAA39248.1|  243|Homo sapiens protein ( Human Hums3 mRNA
           for 40S ribosomal protein s3. ).
          Length = 243

 Score =  165 bits (402), Expect = 9e-41
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 434
           SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83  SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142

Query: 435 RGQRAKSMKFVDGLMIHSGDPCN 503
           RGQRAKSMKFVDGLMIHSGDP N
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVN 165



 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 210


>AF281313-1|AAF82383.1|  158|Homo sapiens ribosomal protein S3
           protein.
          Length = 158

 Score =  162 bits (394), Expect = 8e-40
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +3

Query: 264 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 443
           LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1   LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60

Query: 444 RAKSMKFVDGLMIHSGDPCN 503
           RAKSMKFVDGLMIHSGDP N
Sbjct: 61  RAKSMKFVDGLMIHSGDPVN 80



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 78  PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 125


>L16016-1|AAA18095.1|   95|Homo sapiens ribosomal protein S3
           protein.
          Length = 95

 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81


>BC071669-1|AAH71669.1|  117|Homo sapiens RPS3 protein protein.
          Length = 117

 Score =  142 bits (345), Expect = 7e-34
 Identities = 71/82 (86%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 186
           MAV  ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1   MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59

Query: 187 GEKGRRIRELTSVVQKRFNIPE 252
           GEKGRRIRELT+VVQKRF  PE
Sbjct: 60  GEKGRRIRELTAVVQKRFGFPE 81



 Score = 70.9 bits (166), Expect = 4e-12
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = +3

Query: 255 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 359
           SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 83  SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117


>AB062288-1|BAB93471.1|  117|Homo sapiens IMR-90 ribosomal protein
           S3 protein.
          Length = 117

 Score = 81.4 bits (192), Expect = 2e-15
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +3

Query: 387 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN 503
           MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 1   MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVN 39



 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 494 PLQ*LVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 637
           P+   V+TA RHVLLRQGVLGIKVKIMLPWD  GK GPKKP PDH+ +
Sbjct: 37  PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSI 84


>AK127619-1|BAC87060.1|  237|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45717 fis, clone FELNG2001613. ).
          Length = 237

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +1

Query: 529 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGN 639
           CAS  RS R Q Q      P     P  A  RP PG+
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGS 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,960,229
Number of Sequences: 237096
Number of extensions: 2245037
Number of successful extensions: 9473
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9472
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -