Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30590
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54SU2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q4XQJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_A0DB70 Cluster: Chromosome undetermined scaffold_44, wh...    33   4.3  
UniRef50_A7S836 Cluster: Predicted protein; n=3; Nematostella ve...    32   7.5  
UniRef50_UPI00015B6345 Cluster: PREDICTED: similar to CG33141-PB...    31   10.0 

>UniRef50_Q54SU2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1386

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = +1

Query: 43  KGKRKYKQKRSTTEHAVFSIKPGQLTNGFKSLSILLGV---YGTKFRTSEVAMYR*SFEE 213
           KGK K K+K        FS    Q+ NGF++L+ LL +   Y +  +T  V ++    E+
Sbjct: 688 KGKEKEKEKEKEVSQIYFS--ESQILNGFENLNNLLSMVNGYSSDIQTLFVCLWETYLEQ 745

Query: 214 N*MSSCCCYQK*CYVQRISAHNHSF 288
              +S     +  Y++++ +H + F
Sbjct: 746 QLDNSDNVTNQYWYIKQLISHYNQF 770


>UniRef50_Q4XQJ0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 112

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +2

Query: 62  NKKDQPPSMQYSVSNQGNLQMVLNRYLYYLVYTGRNSGHRRWQCIDN--HSKRTKCQAAV 235
           NKK +    +YS  N      +L  Y  Y  Y+  +S ++R    DN  +SK TK     
Sbjct: 25  NKKSRNTINKYSKRNINKYDSILKYYFVY-PYSDTHSNNKRNIKCDNLFNSKETKTGCIG 83

Query: 236 VTKNNVMYKGYRLTIIR 286
            ++N+ +Y  +R+T I+
Sbjct: 84  NSRNSKIYYEWRITKIK 100


>UniRef50_A0DB70 Cluster: Chromosome undetermined scaffold_44, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_44,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2133

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = -3

Query: 426 FSFRIILTSGARASSFFYHNFTHIFSLLYAREHCAVLHFP*NLSVVERMIVSRYPLYITL 247
           ++ R+I + G  A    +HN+   + LL  R++  +L       + E +I SR   Y+ L
Sbjct: 156 YNLRLINSQGIEAILNNFHNYFDSYPLLKLRKYIVLL-LELLSQICEMIISSRVYRYVML 214

Query: 246 FLVTT 232
           F++TT
Sbjct: 215 FIITT 219


>UniRef50_A7S836 Cluster: Predicted protein; n=3; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 2398

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 53   ESTNKKDQPPSMQYSVSNQGNLQMVLNRYLYYLVYTGRNSGHRRWQCIDNHSK 211
            E  NK+D  PS++ ++ +     M + RYL Y +   R      W   D+HS+
Sbjct: 2285 EGVNKEDPFPSIETNIGSLPEYNMYILRYLLYTIALFRTPS--SWILFDSHSR 2335


>UniRef50_UPI00015B6345 Cluster: PREDICTED: similar to CG33141-PB;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG33141-PB - Nasonia vitripennis
          Length = 1934

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 83  SMQYSVSNQ-GNLQMVLNRYLYYLVYTGRNSGHRRWQCIDNHS 208
           ++Q  V+N+ GN+Q V + ++Y +   G   GH RW+ +   S
Sbjct: 78  TLQCEVNNRVGNVQWVKDGFVYVIQPNGEVVGHSRWRIVGEQS 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,398,074
Number of Sequences: 1657284
Number of extensions: 8195675
Number of successful extensions: 22406
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22400
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)